| Id Trinity | TRINITY_DN46185_c2_g3_i24 |
|---|---|
| Name Transcript | Ll_transcript_281881 |
| Sequence | GGCCCTTTACAATATGAACCGGGCGTACCTTTCTCTACCAGAGGGGACAGCTTCTGTTGTTGGTCTGATTGCAATGATGACAGATCACTATAATGTGCTG GAAGAAAGTGACAGTGAAAGGGACAGCAATGATGCACCGGGATCTCGAAAACCTGTGAAACTAAAGCGTGGAAGATTTCAGCTCAGTGTCTCAAAAGATT CTGTCCAGTCTCAGTCAATTGCTTCTGATGATGGTTGCCTATCTCTATTGAAGAGAAGACGCACTAATGGTAGCCAGCCTCGTGCAGTTGGGAAAAGGAC CCCTCGCATCCCAGTGTACTACTCCAATAAGATAGACGATGGGGAAAATCATATTTTGGCTAATAAAAGAAACCTGAAGTCAGCTTTTGATAATACTGAT GATGAGGTTGCACATGTTGCAGCTCTGGCATTAACTGAGGCTGCACAAAGAGGTGGCTCTCCCCAAATATCTCAAACACCATACACAAGATCACAGCAAA AGTCCTCTCCTGTTCAAAGCTGGGAAAGAATGCACCAGCAGTCTAAGACAGTTCCTACCAAGTTTTATGATGCTTCTATGGATGAAGAGTTCTTAGAAGG TAGTATAGAAAGCAGGGGAGCCGAAAATGGAGAATGTGCTAGAGCTACTAGTTCCTTGATGGACCTGGGATCCATAGCCACTGTCGAAGTTAATCAGAAA CGGGAAAGTAATTACAGAAAGAAAGGGAGTGTGGAAAATGTTGGAAACCATTTTCTTGATGATGGTGGAGAAGCATGTAGTGGCACTGAAGGACTTAATT TAAGTTTGAAAGGAAAAGTTGATATTGAGGTTACTAATGCAAAGCCTGAGAAATTCTCCCAAAAAGGCCAGAGGAAAAGAAGCAAGAAACTTTTGTTTGA AGATGAAGGCTCTGCCTTGGATGCTTTGCAAACTTTGGCTGATCTTTCTCTAATGATACCACCTTCTACAACGGAATCTGGTAAGAATAAAGTTGTTGAT ATATTTTATAGGGTAAGAGACCTTAACAAATTCACATTCTCATGCACAGAGTAATAGCCAACTTGGAAACTTTCCAGATTTTAGCGTTTTTACGCTGAGA GTACGTGGATAGTCCAGTAGAAGGAAAAAACATCCATTTTTCAACTTAGGCTGGCATGATTAGTTGTGCTTTCAGTCTCTTCATATTATTTGGGAGTTGG GATGAATATTTTGCTCACTTTCTCATTTAACAAATTCCCTGAACTGTACTTGTTGCTACTCCTGTTTATTTTTATTGTTTTAGTCATTGTGATTTTTCAA ATTTTATTTTCTATCAAAGTTCTTCTAATCCACTATGGTCCTCCCCCATTTCCATCTAGACTCACCTGTCCAGATGAAGGAAGAAAGAATGTATGCTGAC AAAGATGTAGAGTCTGTTTTACCTGAAGCCATATCAACCAGCCAAAACAGAGATAGAATTAGACTCCCAGGTCAAAAGGCTGTTCGTGCAGTCCCTGGAG TTGAGGTTTCAACCCCCAAAAAATCTAAATTTGGAAAGGAATCAGAAAATGATATGCAGCTTCCTTCTGCTGATAGGACATGCAAAAGAAAGGGAAAGTC TATGGTTTCAAAGGTAGCAAATGCAAAGCCTGATTCTTATCCAACTGATCACTTAAATAATGAGGCTGGAGATGAAGAGAACAAATCGGTGATTAAAGGA AAACGCACTGATCAGACTTTCACTATAGCAAAACAATTAAAGTCAGTCAGTTCAACAGAAAGTCCTTTGTGTAGTAGTGACACAAAAAATTTAGCAGGAT CAACTGCAGAAGTCCCACTTGCAAGTGAAATTATTTTACCAACTAAGAAGAAAAGTAGACGTAAGGCAAGTTTACCGAGAGCATTCATGGCCAAAGAGAA GTGTTCTGAGAACATACTGACAAGCCAGCCTAACAGTTATTCAACTCCCATCCAGGATAATGCATTATTTTCAAAGGAAAAGCTTTCTAGTTGTTTGTCA TCGTATATGTTTCGCAGATGGTGTACGTTTGAATGGTTCTATAGTGCAATTGATTATCCGTGGTTTTCCAAACAGGAGTTCATGGAATACTTAAATCATG TTGGTCTAGGGAATATCCCAAGGCTAACTCGTCTTGAATGGAGTGTCATAAAAAGTTCCCTTGGCAAACCTCGCAGGTTTTCTGAACACTTTCTTCATGA AGAAAGACAAAAACTAGAACAGTATCGGGAATCTGTTAGGAAACATTACACTGAATTACGGACTGGTATCAGGGATGGACTTCCAACAGATTTAGCTAAA CCTTTATATGTTGGACAACTAGTAATTGCTCTTCACCCAAAGACAAGAGAGATCCATGATGGAAGTGTGCTTACAGTTGACCATGACAAGTGCAGGATTC AGTTTGACCGCCCAGAATTGGGTGTTGAATTTGTCAGGGATATTGATTGCATGCCTTTGAATCCATTGGAAAATATGCCAGAAGCTCTGAGGTGTCAGAT TGGTGCTGGCAATATCCCTTGTATGAGTAAAGAACCACAAATGAAGGGGAATTCCAGTTTTGGTGGGTGTCTGCCGAATGATTCAAATCGACCTGTGGAA AAGCCACCAGCGTCTTCAATCTCTCTCACTAAGCAGGGAATGGTTGGATTGCTTTTTCAATAACAAACATCAAACATTCAAACTATCATTGCACAAATTG TAGAAATAGTCTGGCATTGTATAGTTCTTTAAATTGTCATATTTTTAAAACTGGTATGATTAGCCTCTTCAATTTTTTTCCTTTTTATTGGCATAATAGA ATTACTTGAACAGACTGTAGGATGATTCATAGTTCTGTTTTGAATGACTGGCTTTGTTTGAACAATGGACAAAATCACTGTGTAATCCCACTGTTTCACA CTGCTGCAATTATCTGGTTTAATTTGGCCACCCGTTGATTTTCTCATCTCTTTAATCAGCATAGGTAGAACCATAAGGGTCTAGTATTGGCTCTGTTGTA TCTTCCATGTTTTTCACTGTGGTTGGCTGTCCAAATTTGACATTATTAAGAGTGATGTGTCTGAAATAATTTTTTTAAATTTCTTACAGGGGGGTGCTAA CAATTCCGTTTCACAAACAAACGCTGCTATTACTAATTACCTTTGTACACAACCAGCAATATGTGCCCAACCATGTACAGTGACCGATCGTCAAACTAAG GAAGCTGATATACATGCCCTGTCTGAGTTTACACGTGCTCTAGATAAAAAGGAGAAATTAGTGACAGAACTAAAAATCGCCAATGATGACATATTGGGAA ACCAAAATGGTTTAGAGTGCTTCAAGGATTCAGAGGCTTTCAAGAAGCATTATGGCATGGTACTTGTACAGCTAAAGGAAGCCAGTGGACAGGTTTCTGA TGCACTACTTCAGTTGAGGCAACACAATTCTTACGTAGGAAACTATTTACCACCATGGATGAAGCCCCCAGTAAGTTTCAATGTTCTGGACAGTCTTCCT AGTGGTAGTGCTTTGGATAGTTCTGTGGCACAAGAGTTAGGGTCAATTGGCATTGATATTATTAAAGGATCCAGGCTTAAAGCACGTGCCATGGTCGATG CTGCATTTCAGGCCATGTCTTCAATGAAGGAAAGCGAAGATGGTTTCATGAAGATTGGGAAGACATTGGATTCTATCAACCATCAGCCTTTGGCCACGAA CTCTAGCTTACCTGTGATCAGATCCCAAGAGCAAGTAAATGGCAGTTCTGATTACCATAATAGGTCAATTTTCTGTTCAGCTGAGCCCTTACCCAATGAT GATGCACCTGGTCCAAAATTGCATCATGATTCTGTCAAAGTTGATACTCAAATTCCTTCAGAGCTCATAACTTCTTGTGTTGCTACATTGATCATGATAC AGAATTGTACGGAACGTCAATATCCTCCCGCTGACGTGGCTCAGATTATAGATTCTGCTGTTACCAGCTTGCACCCATGCTGTCCACAAAATCTTCCTAT TTACAGAGAAATTCAAATGTGCATGGGAAGAATTAAGACCCAGATTTTAGCTCTAATCCCTACTTGATTTCCTTGTTTTACTTTTCTCAAGCTGCTACAT ATAGGAATGTTGCTGAATGATGAGTTCAGAACTCAAATCACTTTGAAGTTCTTCACTAATCTTGTAGTTTATGTCCTTTTATATCCAGGTCAGCAGAATC AAGCACTGGTTTTAGTGATATTGTAATTGACCACCCTCCACTGCTGTTGTAAATCTATAATAAGTTTTCCTTCTGCTACAACAGCTTTTGGAGTTATCCC AGCTAAATTGGAAATTTGCTACAAATTCTGTTATAATTCAAACTCTGAAACCAGATTAATCAAAAAAAAATTGGGAACATAAGGGTATGTAGCCATAGTA ATCATTAGCATTTTGATATGCTCATCATTACCCATAAATTTGTCTCAATAAATTTACATAGATAAAGTATTCCTTGTTTG BLAST |
| Tissue | pods |
| Gene name | LI_gene_142809; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_281881
| Blastp | Protein ALWAYS EARLY 2 from Arabidopsis with 46.22% of identity |
|---|---|
| Blastx | Protein ALWAYS EARLY 2 from Arabidopsis with 49.03% of identity |
| Eggnog | lin-9 homolog (C. elegans)(ENOG410YA1T) |
| Kegg | Link to kegg annotations (AT3G05380) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019440562.1) |
| Pfam | - |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |