Ll_transcript_281882

• Id Trinity: TRINITY_DN46185_c2_g3_i25
• Name Transcript: Ll_transcript_281882
• Sequence: CTGTGATTGGCTAGTCCATCTCTATTTCAAGTTTCGCGGCAACCATTTTTTTCCTCCTCCACCTTCTTTCTCTCTCTAAACCCTGCGCCACTTCTCTCTC CTCTTCTCTGCTTCAACGCCAATCGGATAAAACCCTACAATAACCGATAGGTAAAGGATTAATGGCACCAGCGAAGAAATCCAGAAGTGTTAGTAAGCGG TTTTCAGCTTCAAATGAGGTTTCTCCTGAGAATGATGGAGTTAACTCAATTAAAAACAAGCTACGGAAGAAAAAGTTGACTGATAAATTAGGATCTCAGT GGAGCAAGGAGGAACTAGAACAATTTTATCAAGCATACAGGAAGTATGATAAAGACTGGAAGAAGGTGGCTGCTGTTGTACGTAACAGATCCATCGAAAT GGTGGAAGCTCTTTACAACATGAATCGGGCATACCTATCTCTGCCAGAGGGGACAGCTTCTGTTGTTGGCCTCATAGCTATGATGACAGATCACTACAAT GTGCTGGTTGGGAGTGATAGTGAAAGGGAGAGCAACGATTCACCAGGATCTCGAAAACCTTTGAAACGAAAGATTGAAAAAGTTCATCTTAGTGTCTCAA AAGATTCTGTTCAGTCTCAGTCGATTGCTTCCAGTGATGGCTGCCTCTCTCTATTGAAGAAGAGGCGCTTTGATGGTATCCAGCCTCGAGCTGTTGGGAA AAGGACACCTCGCGTCCCAGTTCACTACTCCTGTAAGAAAGATGATAGGGAAAACTATGCTTCGCCCAATCAAAGAAGCTTGGGGTCAACTGTTGTTGTT AATGATGATGAAATTGCACACGTAGCAGCATTGGCATTAGCTGAGGCAGCACAAAGGGGTGGCTCTCCCCAAGTTTCTCAAACACCGCACATAAGAGCAG AGCATAAGTCCCCTCATGTTCAGAACTTGGAAAGAATGGGCCAAACGTTGGAGACAGCTTGTGCCAAGTTTAATCATGCTTCTGTGGATGAGGAGTTCTT GGAAGGTAGCATGGAAAGCAGGGGAGCTGAAAATGGAGAATATGTGAGAGATTCTAGTTCCTTAATGGATATGGAAGGCAAAGACTCTGTCGTTCTTCAG AAGGGAAAAATGATTCACAGTAAGAAAGAGAGAGTGGTAAACATTGGAAACCATCAGCTTGATGATGGTGGAGAAGCATGTAGCGGCACTGAAGAAGGAC TGAGTTTTAGTTCTTTGAAAGAAAAAGTTGATGTTGAGGTTAATAATGCAAAACTTGAGCAATCCTCTCTAAAAAGTAAGAGGAAAAGAAGCAAGAAACT ATTTTTCGGAGATGAAATCCCTGCCTTGGATGCTTTGCAAACCTTGGCTGATGTCTCTCTAATGATGCCGGCATCTGTGGTAGTATCTGAATCATCTGGC CAGGTGAAGGGAGACATAGTGATTGTTGATAAAGGTGATAGATCTGCTTTACCTGAAGCAGCATCGACAAGCCATACCAGAGATAAAATAAAACTCTCAG GTTCAAAACAAAAGGATGTTCATGTGGTCTCTGGAATTGAGGTTTCAACCCCCACGAAATCTAAACTTGGAAAGGAATCGGCAAATGATACTAAAGCTCT CTATGAATCAAAAGAGCAATTTTCCCCTGTTGATAGAACATGGAAAAGAAAGCGAAATTATGTGGTTTCTAAGGTTGCAAGTACAAAGCTTAATCCTTAT CCAAATGATCCCTTGAAGAGTGAGGATGTAGATGAAGAAAACAAACCTTTGTTTAAAGAAAAAAATACTGGTCAGGTTTTCACCCAACCAAGACAAAATA CAGTCAGATCGCCAGAGAGTTCCCTGAATAGTGATCAGAAGGATTTAAAAGTATCAACTGCAGAAACTCCACTTTTGAGTGAAGTTAGTTTACCGATTAA AGGAAGAAGGAGATGGAAAATGATTCCACAGAGAACATTCATACCTAAGGAGAAGCGTTCTGAGAACATCATATTGAAAACTCAACATAATATGTACTCG ACCTTAAAGGATAAGCTTTCTAGTTGCATGTCATCATATCTGTTCCGCAGATGGTGTACTTTTGAATGGTTTTATAGTGCTATTGATTATCCATGGTTTG CCAAAAGGGAATTCGTGGAGTACTTAAATCATGTTGGACTAGGGAATATCCCAAGACTAACTCGTGATGAGTGGAGTGTCATAAAAAGTTCCCTTGGCAA ACCTCGCAGGTTTTCTGAACACTTTCTACGTGAAGAAAGACAAAAACTAGAACAATATCGGGAATCAGTGAGGAAACATTACACTGCACTACGGACTGGT ATCAGTGATGGACTTCCAACAGATTTAGCTAAACCATTATATGTTGGACAACGAGTAATTGCTCTTCATCCAAAAACAAGAGAGATTCACGATGGTAGTG TGCTTACAGTTGACCATGACAAGTGCAGGATTCAGTTTGACCGTCCTGAATTAGGGGTTGAATTTGTCCCGGACATTGATTGCATGCCTTCGAATCCATT AGATAATATGCCTGAAGCTCTGAGGAGGCAGGTCAGTGCCAGAAAAGTCTCTTTGATGAGTAAAGACCCACAGGATAATGGAAATTCAAGTTTTGGAGGA TGCACTACACGTGTTTCACCTGGGAAGGGGGATGTTAACCATTGTGTTTCTCAAGCAAAGGCTACTACAATTGATAACCTCTGTGTACAGAAAACAGTTT GTGCTCAACCATGCACAGTGACTCATCATCAAGCTAAAGAAGCTGATATACATGCACTTTCTGAGCTAAAGCGTGCTCTGGATAAAAAGGAAACATTGCT GATGGAGCTTAGAAGTGCAAATACTGACATTTTGGAGAACCAAAATGACATTGAATGCTTAAAAGATTCTGAGGCTTTCAAGAAGCATTATGCCACGGTA CTTGTAGAGCTGAAGGAAGCCAGTGGACAGGTTTCTGATGCTATGGTTCATTTGAGGCAACGCAATACTTACACTGGAAATTCTCTAACACCATGGTTGA AGCCCCAAGTTAGTTTCAATGATCATGACAACCTTCCCGGTATGTTGGATAGTTCTTTACCACAAGAGTTAGGGTCAACCGTCAATGAAATTATTAAAGG ATCCAGGCTAAGCGCAAATGCAATGGTGGATGCTGCATTTCAGGCATTGTCTTCAACAAAGGAAGATGAAGATGCTTTCATGAGGATTGGACAGGCACTG GATTCTATTGATTATCAGCAATTAGCCTCCAACACTAGGTTACCTCTGATCAGGTCTCATGAACAAGTAAATGGCAGTTCTTATCATCATAATCAGTCAA CTGGCTGTGTCTCGGTGCCTTTACTTAACGATGCATCTGATCCAAAACTGCATAATGATTCTAAGAAAGGTTACACCGAAATTCCTTTGGAGCTCATTAC TTCATGTGTTGCAACATTAATCATGATACAGACTTGCACTGAACGGCAATACCCTCCGGCTGACGTGGTTCAGATGTTAGATTCTGCTGTTACTAGTTTG CAACCATGCTCTCCTCAAAACATTCCTATCTTCAGAGAAATTCAAATGTGCATAGGAAGAATTAAGACTCAGATTTTAGCTCTCGTCCCTACTTGATTTT TCTGTCCTTTATTCTCTTTAAGTAGTTTGTATAGAGAATACTGAACTACCAGTATCATATAGAAGTTCCTCACTCTATAATTTATGTTTCTCTTTTTAGT TCAATAATTTTTCTTTCAGGTCAATAGGTTCAGATGATGTTATTGATAATTGTGCAGTTCATCTGCTAGTGGGTGCGGCATTGATCAAAGAAGCAAAATA GAAAAGTGTGTTGGAGAGTGAAGTTAAAGTTACTGGGAAAACTAGTTAGCATAATCCATAAATAATGATGTATCAGACTTTGAATAATTGTTCAATTTCC TTGAAATCCATTTACTTTTGATGTATCAGATTTGTATGATTACACACGAAATCTTATAATGTGTTTTTCAGTGATTATGTGATATTTAGTTATTGGCAAG C
• Tissue: pods
• Gene name: LI_gene_142809;
• Additional information: details;

Expression of Ll_transcript_281882

FPKM

• PAB: 0
• PNAB: 0.4
• PS1: 0.5
• PS2: 0
• PS3: 1.6
• PW1: 0.8
• PW2: 0.2
• PW3: 0.2

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_281882

• Blastp: Protein ALWAYS EARLY 3 from Arabidopsis with 41.99% of identity
• Blastx: Protein ALWAYS EARLY 3 from Arabidopsis with 41.99% of identity
• Eggnog: lin-9 homolog (C. elegans)(ENOG410YA1T)
• Kegg: Link to kegg annotations (AT3G21430)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019441175.1)
• Pfam: Myb-like DNA-binding domain (PF00249.30)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;