Ll_transcript_282246

• Id Trinity: TRINITY_DN46193_c0_g1_i2
• Name Transcript: Ll_transcript_282246
• Sequence: GTTCTATAATTTGTCTGACTCAGAAACTTAGAAACCTTTCTCACATAAGTCCACTTTCCCCCCCTCAAAGGGGCGTGAAAAAAGCACTAAGAAAAAACCT AACCAAACACACATGCCTTAGTGTTTGCCCATAGATTCTTCTCCAAATACCAACAACTTCTAGTTCTAAGATCACAGAATTGAAAACAAAACATCAAATT TGTATTCCAAAAATTTTAGAATCCCCTGAAGAAATGGCTTTCAATAACAAATCCAAGAAATCTAGTTCACCTTCTCATATTAAACTCTACATCACCCTCT TTTTCGTAGTCCTCTTCACCCTACCAGCTCTTCTCCTTCTCCACATCCCCAACACCAATTCCATATGCGCAAACCTTTCCAACAAGCCATGGTCTGGTGA TCTTAGATTAGCCGAGTTTGCATGGAACCGCCTTTCGTTTTTCGAAGACAGCCCTTCACCCATTTCTCTCAAAATTGCTGTCTTCTCTAGAAAATGGCCT ATTGGCACCACCCCTGGCGGCATGGAGCGTCATGCTCATACGCTTCACACCGCTTTAGCGCGGCGTGGCCACCAAGTTCATGTCTTCACCTCTCCACCAC AGGATGAAAGCAATTCAGCCTTAGCTTCAGAGACAAGTAATCATGAAGCAGGTGCACCCTCTTCACCTTACATCCATTGGCATGAAGGAGAGCCGGGCAA GTGGCGCTACAACAAGGCATGGGAACAATTTCAAGAAGAAAACCAAAGAGAACCCTTTGATGTTGTTCACTCAGAAAGTGTAGCACTTCCTCATGGGATG GCTCGCAAACTTCCAAACCTTGCAGTGTCTTGGCATGGCATAGCCCTTGAGAGCTTGCAATCGAGTATTTTCCAGGACTTGGCTCGCGGCCCTGATGAGC CTCTATCACCGGATTTCAACAAAAGCTTACACGGGGTTATCCCTAAGGTGCTGAATGAAATAAGGTTCTTCAGGAACTATAAACACCATGTTGCTATTAG TGATAGTTGTGGTGAGATGCTAAGGGATGTGTACCAAATTCCAAGTAAAAGAGTCCATGTTATTATCAATGGTGTAGATGAAGATGACTTCAGAGAAGAT GTAAAATTGGGAAAAGAATTTAGAACCAAAATTGGCATTCCAAGCAATGCAAGTTTAGTGCTTGGTGTAGCTGGAAGATTGGTGAAGGATAAAGGCCATC CTTTGCTTCATGAAGCCTTCTCTAGGCTTATAACCAAACACCCGAATGTGTACTTGATTGTTGCTGGCTCTGGGCCATGGGAGAACAGGTACAAGGATTT AGGGAGCCAAGTTCTTGTTCTTGGTTCTATGAATCCTTCCATGTTAAGAGCATTTTATAATGCCATTGACATATTTGTGAATCCAACTCTCAGACCACAA GGGCTTGATCTTACTCTAATGGAGGCAATGATGAGTGGGAAGCCCCTTTTGGCATCAAGGTTCCCAAGCATCAAGGGTTCTATTGTGGTTAATGATGAAT TTGGCTTTATGTTCTCTCCCAATGTCCAGTCCTTGTTGGAGGCACTGGAAGCAGTGGTAAGTGAAGGGCAAGAGAGGCTAGCAAGTAGGGGACAAGCATG TCGCGAGTATGCAAATTCCATGTTTACAGCAAGAAAGATGGCATTAGCATATGAGAGGTTATTTCTATGCATAAAAAAGGATACATTTTGTAACTATCCT TGAGGCTTAGGCTAGTGGATACTATTCCTTTTCCTTTATTTCATTGTTTTCGGTTTCTTTTGTTCAGTATGACATGATCATCTTACATAATATATTGTTA TCATAAATAGAATTCCTTGTATTACTTTATAGGCATTATGGCTTCCATTTTGGAAGATCATCTTTTGTGTATGATGATGTTACAGTAGACAATAAAAATG GAACTCTACTTGCTGGGTGTTAAATCAAACACTAGTTTCATCCATCAAAG
• Tissue: pods
• Gene name: LI_gene_142866;
• Additional information: details;

Expression of Ll_transcript_282246

FPKM

• PAB: 1.8
• PNAB: 0.6
• PS1: 0.7
• PS2: 3.5
• PS3: 2.4
• PW1: 1
• PW2: 0.6
• PW3: 0.2

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_282246

• Blastp: Uncharacterized glycosyltransferase MJ1607 from Methanocaldococcus with 24.86% of identity
• Blastx: Alpha-monoglucosyldiacylglycerol synthase from Streptococcus with 24.22% of identity
• Eggnog: Glycosyl transferase (Group 1(COG0438)
• Kegg: Link to kegg annotations (MJ_1607)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019445203.1)
• Pfam: Glycosyltransferase Family 4 (PF13439.5)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;