Id Trinity | TRINITY_DN46204_c1_g1_i10 |
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Name Transcript | Ll_transcript_319837 |
Sequence | GTTCTAACACAACCATGGCTGTAGCTTCAAGATTCATGTGTACAACTCTTACTCATCACGGTTTTAGCTCAACAACACATAGAACCCATTTGGGTCATGC TCAGTTAACTCTTTCTTCACGCAAGAATCAAATTATTCATTGTTCAGTTTCTGCAAGTGATGCCACAAAAACCTCCTCAGTGATGGAACCCGTTATTCCA TGGGGCTGTGATATTGATTCAGTAGAAATTGCATCAGCTTTGCAGAAATGGTTGTCAGAGTCAGGCCTTCCACCACAGAAGATGGGAATACAAAGAGTTG ATGTTGGAGAGAGAGGACTTGTTGCATTGAAGAATATAAGGAAAAGGGAAAAGCTTCTCTTTGTTCCTCCCTCACTAGTCATAACTGCAGATTCTGAGTG GAGTTGTCCAGAAGCCGGTGAAGTATTGAAAAGGAATTCAGTGCCCGATTGGCCATTCATTGCAACTTACCTCATAAGTGAAGCTAGCCGCATGAAATCT TCTAGATGGAGCAATTATATATCAGCCTTACCTCGGCAACCTTACTCACTTCTTTACTGGTAATTGGATTGTATGATGAAATCTTTTGAGAGCTTGTTAC AGAAGGATACGAGATAATAATATTGATGAGTGAGGAATTGAAGTTAGGAGCTTATTACTTTGCTATGGAGAGTTATGGGAGATTTGGAAATGAGGAGACT ATTTTCCAATGTGAGCCTATCCAGGGGAGTGAAAATGAAGACAAGATTAGAACATGATGTATTAAATATTATAACTTTATAGCATTCTGAGCGTATCATT TCGATAAAAATACACGAGATGCTTTTCTGATTTCTCATTTTCATTAACTTCACTTTTTCTGGTGTTAATTTTGGTCTAAAGCAAAACATAATACTCGATG GGCTTTTCATCTTATTTTCATAAATAATGAAGGAATCTACTCTCAAAATTCTCCCAATACTTTATTTATGCCATTTCAGGTCACAAGCAGAACTAGATCG CTACTTGGAAGCTTCACAGATTAGAGAGAGAGCAATTGAAAGGATTAACAATGTGATTGGAACGTATGGTCCAATTATTTGTACCTCATGTTTCATCAGG GATTCTAATGTGCTTTCTTGATTGAATAATCCTTTGTCTTGGTATAATTTATGTTCGTCCCGTTTTTCCACAGATACAATGATTTGAGGCTGAGAATATT TTCCAAATACCCTGATTTATTCCCTGAAGAGGTGTTCAACATAGACTCCTTCATATGGTCATTTGGCATTCTTTTTTCTCGCATGGTTCGGTTACCCTCC ATGGATGGAAAAGTTGCCTTGGTTCCTTGGGCAGATATGCTGAATCATAGTTGTGATGTATGGTCTCTTCCAAAGAAGATTCATAACAAGTTTTTCCCCA GGAAGTTTAATTTGTTTTCACTGGTCTAGGTGGGGACATATTTGGATTATGATAAATCGTCGAAGGGGATTGTTTTTACGACAGATCGAGTCTATCAACC AGGTGTTTATTTCATATGGAAAAAAATCAAATGGAGAGCTTCTGTTATCTTATGGATTTGTTCCAAGGGAAGGTGCTAATCCTAGTGATTCAGTTGAGTT GCCACTGTCACTCGAGAAATCTGATGAGTCCTATGAGCAGAAGTCAGAACTCTTGAAGAAGTATGGTTTATCAGAGTGAGTGCCTAATATTTCATACTTT TGTCTATACATATAAGGATGAAGTTCCTTGTCTTTCATTCTCATTAAGCTATGTTTAAAAACACTCCTAATTTAAAACTTAGTACAGTGAGTTCTATTTT AGCACTCACTCTAATCATTCTATTGAGTATTATTACTTTAAAGTGCATAAGATAGTCTTATCCAGGACCCAGACATTTCCAAAATATCATTTTTCCAATG TCAAAATGATTTGTATAAAATCATTTTAGCCTGTAATGTACCGTGCACAAGTGTCCTTGCTTGAAAGTTCATAATAATTAGAGTAAACCCATTCCGTCAT CTACATATACAATCATCATCAATTTGGTCCTGAAAAGGTTGTGGTATCAATTTGATCTGTTCATAATTGAAATTGTCACTGCGTTGGTCCTCGGTCCTCC AAAGAAATTTAGTCCCTCAAGAATGTAAAGAGTCATCAATTTAGCATATCATGCATTTGAAATGTCATCAAATTAGGGTTCAATAACGCTCACTTCTCCA TCTAACAACAAGGACCAATTTGGTGACAATTTGGATAATTGAGGGACTGAATGGATGATAAAATATTTTTTGACTAAAGCAACGATAGTTGTAGCTTTGG AGGGCAAGAATACAAGGTGGGGACATAACTATATTTACTCAATTTATTTGAGCAACTATCATTGCTTGATTTTTTATTATTGATTCATATTAAAGGAACA TGTGAATGGAAGACAGGAAAACTTAATAATTTCTCATTACCAAACTTGTTGGAGTACAAAGCATTTATACAAGGGAAAAGAGGAGCCTTTGACAGCTAGA AAAGGCAACAAAGAAACTAACTACCACTAACTAACAAACTTTTAATAACTGCCAATCATCTTTTACCTTTTGGTAACCATGTGCAAGTAACTAACTTATC TAACAAGTAGTCTTTCACTTCAATACTCTCCCTCAAGTTGTGGAGAGTAAATTCTTAATGACCCCGAGCATGGATAACAGATGAGCAAAAGGATCTGTTT CTAGAGCTTTGGTAAGAATGTTTGTTGCTTGTTCAATCGTAGATATAGGAACAAATGATAGAGTTTGCTTTGTAAACGTTCTCTAGCAACATGACAATTG ATTTCAATGTTTTTGTGCGTTAGTGGAAGACAGAATTGGCAGCAATGTGCCTTGTAGAGTTATTGTCACAATACAATAAGGCTGATTGCTTAAAAGAAAC ATACAAATCATATAATAGGAAGGTTAACCACCACTAAATTTCACATGAGGCAAAGTTGGATACTTTATCTCAAAGGACGACCTTAAGACTGTGTTTTGTT TCTTAGACTTTCATGAAATTAATGAGTCTCCCAAGAACATGCAAAAACCAGAAACTGAACGCTTAGTATCACACCATTATTGTGCAGAGCACATGTAACA GGTTGCATACCTCTAACCTCTCAAGACCCCGATAGGTGGGAGCCTCGAACACTGAATTGCCCTTTTTTGATTGATATAGCTGCCTCTGTATTAATGGTCA TGACCAGTTGTCAGTTACCTTCTCTCATGATTAGTTTAACATTTAAAATCTTATTATCATTTCTTTTTTTATCTATATATCTTTGAAGTATCATTCTGAT ATATGCTTCTAAATTGAACTTGTTACTAACTTCTTTTCTTCTATTTTGATCAGATCTCAGTGTTTTCCTATACAGATTACTGGTTGGCCAGTGGAGTT BLAST |
Tissue | pods |
Gene name | LI_gene_142929; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_319837
Blastp | Ribulose-1,5 bisphosphate carboxylase/oxygenase large subunit N-methyltransferase, chloroplastic from Pisum with 35.85% of identity |
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Blastx | Ribulose-1,5 bisphosphate carboxylase/oxygenase large subunit N-methyltransferase, chloroplastic from Nicotiana with 33.33% of identity |
Eggnog | - |
Kegg | Link to kegg annotations (AAA69903) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019420730.1) |
Pfam | - |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |