| Id Trinity | TRINITY_DN46204_c1_g1_i12 |
|---|---|
| Name Transcript | Ll_transcript_319840 |
| Sequence | GTTCTAACACAACCATGGCTGTAGCTTCAAGATTCATGTGTACAACTCTTACTCATCACGGTTTTAGCTCAACAACACATAGAACCCATTTGGGTCATGC TCAGTTAACTCTTTCTTCACGCAAGAATCAAATTATTCATTGTTCAGTTTCTGCAAGTGATGCCACAAAAACCTCCTCAGTGATGGAACCCGTTATTCCA TGGGGCTGTGATATTGATTCAGTAGAAATTGCATCAGCTTTGCAGAAATGGTTGTCAGAGTCAGGCCTTCCACCACAGAAGATGGGAATACAAAGAGTTG ATGTTGGAGAGAGAGGACTTGTTGCATTGAAGAATATAAGGAAAAGGGAAAAGCTTCTCTTTGTTCCTCCCTCACTAGTCATAACTGCAGATTCTGTAAG CTTTTCTTTATGTTAGTGTTAATTAAAGTCCCTTGTCTGATTGAACTTCTAAGTTGTATTTACCGCCACTGAGGCAGTTGTGTTGTAGCCCGATACTGTC GCATCATTATGATCTAGTGTCACACTAAAATTTTGGTCTATAATTTGAAAAAAATGGTTGTATCTGCAAGCAAATTTAGTAAGAGTTGCATATAAAGAGC TGGGAGAGAGAAAGATTTGTGTTGATTATTGGACTCATAATTCCATAAATGATATAAATTTATTCAATAACTTAAGCATTTAATCTTACATAAAGTAGCA TTATTGGAGGGGAATCTGCTTATAAGTTATTGCAAAATGGTTAGCAGAAGAGAATTCAAAAAACACTTGTACTCAACTCTACTGAGTTGCAAATGCTCAG TGTTTTAAATTGCAGTTGCGATTGCGATTGCGTTAACGGTTCTGTTTGCTGCGATTAAGGTCATTGTGGTTGTTGTAATGCGGATTGTGGCTGTTGCAGT GTGAATTATTTTGTAATTAAAAAACTACTTTCGAATTCGATCCGACCTGATGTGGTCCAAATGCGGTCTGATGCTGTCATTGTGATTCGGAATCACACCG CAATTGCGGTGTGATGCAGTTGTGGCGGTCACTGCAACCACAATATTACGGCCGCAATTTAAATCACTGACATGCTCTTACTATATTTCAAACAAATATA AAGTAGAGCATTATATAAGGACGTGGCTGTCAACACCAGTACTTGATTTGATCCAAGAAAGTTTCCCTGTGAATTGGTCTGCATAAGAAGTTAGAATGCT ACTCATAATTTAGGTCTTAAATTGTAAAGCACATACTATCTGTGTCAATAGCTTCTTTCCTAAAACTATATGCGATGCCATATGAAGAAGCAGAACAATC ATGGTTGAGTAAGTATCTTCTTTCCTAAAATTATATGTGATGCCATATGAAGAAGCAGAACAATAATGGTTGAGTCGAATGATCTGTTATTTTGGTTTCC GCTTTCTGGTGTTCGGTGAGATGAAATTTTTTTATTGATATATGGAAACTTTTTTTAAAGTTATACTAAAACACCCGAGTTGGTTCATCATATTGATCTG GGTCAGGTACTTATGCATCTGTATGGGTTATGTCTCTGTATTATGATTGTTAGGAGTGGAGTTGTCCAGAAGCCGGTGAAGTATTGAAAAGGAATTCAGT GCCCGATTGGCCATTCATTGCAACTTACCTCATAAGTGAAGCTAGCCGCATGAAATCTTCTAGATGGAGCAATTATATATCAGCCTTACCTCGGCAACCT TACTCACTTCTTTACTGGTCACAAGCAGAACTAGATCGCTACTTGGAAGCTTCACAGATTAGAGAGAGAGCAATTGAAAGGATTAACAATGTGATTGGAA CATACAATGATTTGAGGCTGAGAATATTTTCCAAATACCCTGATTTATTCCCTGAAGAGGTGTTCAACATAGACTCCTTCATATGGTCATTTGGCATTCT TTTTTCTCGCATGGTTCGGTTACCCTCCATGGATGGAAAAGTTGCCTTGGTTCCTTGGGCAGATATGCTGAATCATAGTTGTGATGTGGGGACATATTTG GATTATGATAAATCGTCGAAGGGGATTGTTTTTACGACAGATCGAGTCTATCAACCAGGTGAGCAGGTGTTTATTTCATATGGAAAAAAATCAAATGGAG AGCTTCTGTTATCTTATGGATTTGTTCCAAGGGAAGGTGCTAATCCTAGTGATTCAGTTGAGTTGCCACTGTCACTCGAGAAATCTGATGAGTCCTATGA GCAGAAGTCAGAACTCTTGAAGAAGTATGGTTTATCAGAATCTCAGTGTTTTCCTATACAGATTACTGGTTGGCCAGTGGAGTTGATGGCTTATGCTTAT TTAGCTGTTAGTCCTTCAAGCTTGAGTGGGAAATTTGAAGAGATGGCTGCTGCAGCATCAAATAAAATTACAAACAAGAAGGATTTGCGATATCCTGAAA TAGAGGAGCAAGCATTACAATTCATACTTGATAGCTGTGAATTCAGTATATCAAAATACAACAAGTTCTTGCAGGTAAGTGGATCACTGGATTTGGATGT GACTTCTCCAAAACAGCTCAACAGAAGACTCTTTCTGAAACAGCTAGCTGTGGATTTGAGTACTAGCGAGCGAAGGATATTGTTTCGTACTCAATATGTA AGATTATAATTAAAGCACATTTTAAACATGTTTGAGTAAGATTATTTATATAATCAGAATCTGAAAATAATAAGACTGC BLAST |
| Tissue | pods |
| Gene name | LI_gene_142929; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_319840
| Blastp | Ribulose-1,5 bisphosphate carboxylase/oxygenase large subunit N-methyltransferase, chloroplastic from Nicotiana with 27.02% of identity |
|---|---|
| Blastx | Ribulose-1,5 bisphosphate carboxylase/oxygenase large subunit N-methyltransferase, chloroplastic from Nicotiana with 27.14% of identity |
| Eggnog | - |
| Kegg | Link to kegg annotations (AAC49566) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019420730.1) |
| Pfam | SET domain (PF00856.27) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |