Id Trinity | TRINITY_DN46204_c1_g1_i15 |
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Name Transcript | Ll_transcript_319847 |
Sequence | GTTCTAACACAACCATGGCTGTAGCTTCAAGATTCATGTGTACAACTCTTACTCATCACGGTTTTAGCTCAACAACACATAGAACCCATTTGGGTCATGC TCAGTTAACTCTTTCTTCACGCAAGAATCAAATTATTCATTGTTCAGTTTCTGCAAGTGATGCCACAAAAACCTCCTCAGTGATGGAACCCGTTATTCCA TGGGGCTGTGATATTGATTCAGTAGAAATTGCATCAGCTTTGCAGAAATGGTTGTCAGAGTCAGGCCTTCCACCACAGAAGATGGGAATACAAAGAGTTG ATGTTGGAGAGAGAGGACTTGTTGCATTGAAGAATATAAGGAAAAGGGAAAAGCTTCTCTTTGTTCCTCCCTCACTAGTCATAACTGCAGATTCTGTAAG CTTTTCTTTATGTTAGTGTTAATTAAAGTCCCTTGTCTGATTGAACTTCTAAGTTGTATTTACCGCCACTGAGGCAGTTGTGTTGTAGCCCGATACTGTC GCATCATTATGATCTAGTGTCACACTAAAATTTTGGTCTATAATTTGAAAAAAATGGTTGTATCTGCAAGCAAATTTAGTAAGAGTTGCATATAAAGAGC TGGGAGAGAGAAAGATTTGTGTTGATTATTGGACTCATAATTCCATAAATGATATAAATTTATTCAATAACTTAAGCATTTAATCTTACATAAAGTAGCA TTATTGGAGGGGAATCTGCTTATAAGTTATTGCAAAATGGTTAGCAGAAGAGAATTCAAAAAACACTTGTACTCAACTCTACTGAGTTGCAAATGCTCAG TGTTTTAAATTGCAGTTGCGATTGCGATTGCGTTAACGGTTCTGTTTGCTGCGATTAAGGTCATTGTGGTTGTTGTAATGCGGATTGTGGCTGTTGCAGT GTGAATTATTTTGTAATTAAAAAACTACTTTCGAATTCGATCCGACCTGATGTGGTCCAAATGCGGTCTGATGCTGTCATTGTGATTCGGAATCACACCG CAATTGCGGTGTGATGCAGTTGTGGCGGTCACTGCAACCACAATATTACGGCCGCAATTTAAATCACTGACATGCTCTTACTATATTTCAAACAAATATA AAGTAGAGCATTATATAAGGACGTGGCTGTCAACACCAGTACTTGATTTGATCCAAGAAAGTTTCCCTGTGAATTGGTCTGCATAAGAAGTTAGAATGCT ACTCATAATTTAGGTCTTAAATTGTAAAGCACATACTATCTGTGTCAATAGCTTCTTTCCTAAAACTATATGCGATGCCATATGAAGAAGCAGAACAATC ATGGTTGAGTAAGTATCTTCTTTCCTAAAATTATATGTGATGCCATATGAAGAAGCAGAACAATAATGGTTGAGTCGAATGATCTGTTATTTTGGTTTCC GCTTTCTGGTGTTCGGTGAGATGAAATTTTTTTATTGATATATGGAAACTTTTTTTAAAGTTATACTAAAACACCCGAGTTGGTTCATCATATTGATCTG GGTCAGGTACTTATGCATCTGTATGGGTTATGTCTCTGTATTATGATTGTTAGGAGTGGAGTTGTCCAGAAGCCGGTGAAGTATTGAAAAGGAATTCAGT GCCCGATTGGCCATTCATTGCAACTTACCTCATAAGTGAAGCTAGCCGCATGAAATCTTCTAGATGGAGCAATTATATATCAGCCTTACCTCGGCAACCT TACTCACTTCTTTACTGGTAATTGGATTGTATGATGAAATCTTTTGAGAGCTTGTTACAGAAGGATACGAGATAATAATATTGATGAGTGAGGAATTGAA GTTAGGAGCTTATTACTTTGCTATGGAGAGTTATGGGAGATTTGGAAATGAGGAGACTATTTTCCAATGTGAGCCTATCCAGGGGAGTGAAAATGAAGAC AAGATTAGAACATGATGTATTAAATATTATAACTTTATAGCATTCTGAGCGTATCATTTCGATAAAAATACACGAGATGCTTTTCTGATTTCTCATTTTC ATTAACTTCACTTTTTCTGGTGTTAATTTTGGTCTAAAGCAAAACATAATACTCGATGGGCTTTTCATCTTATTTTCATAAATAATGAAGGAATCTACTC TCAAAATTCTCCCAATACTTTATTTATGCCATTTCAGGTCACAAGCAGAACTAGATCGCTACTTGGAAGCTTCACAGATTAGAGAGAGAGCAATTGAAAG GATTAACAATGTGATTGGAACATACAATGATTTGAGGCTGAGAATATTTTCCAAATACCCTGATTTATTCCCTGAAGAGGTGTTCAACATAGACTCCTTC ATATGGTCATTTGGCATTCTTTTTTCTCGCATGGTTCGGTTACCCTCCATGGATGGAAAAGTTGCCTTGGTTCCTTGGGCAGATATGCTGAATCATAGTT GTGATGTGGGGACATATTTGGATTATGATAAATCGTCGAAGGGGATTGTTTTTACGACAGATCGAGTCTATCAACCAGGTGAGCAGGTGTTTATTTCATA TGGAAAAAAATCAAATGGAGAGCTTCTGTTATCTTATGGATTTGTTCCAAGGGAAGGTGCTAATCCTAGTGATTCAGTTGAGTTGCCACTGTCACTCGAG AAATCTGATGAGTCCTATGAGCAGAAGTCAGAACTCTTGAAGAAGTATGGTTTATCAGAATCTCAGTGTTTTCCTATACAGATTACTGGTTGGCCAGTGG AGTTGATGGCTTATGCTTATTTAGCTGTTAGTCCTTCAAGCTTGAGTGGGAAATTTGAAGAGATGGCTGCTGCAGCATCAAATAAAATTACAAACAAGAA GGATTTGCGATATCCTGAAATAGAGGAGCAAGCATTACAATTCATACTTGATAGCTGTGAATTCAGTATATCAAAATACAACAAGTTCTTGCAGGTAAGT GGATCACTGGATTTGGATGTGACTTCTCCAAAACAGCTCAACAGAAGACTCTTTCTGAAACAGCTAGCTGTGGATTTGAGTACTAGCGAGCGAAGGATAT TGTTTCGTACTCAATATATATTGCGAAGGAGGCTGAGGGATATGAGATCTGGCGAATTAAGAGCTCTAAAAATCTTCGATGGGTTTCGGAATCTTTTCCA ATGAGGGCATTCGCTAGTGCATTATTGTTCAATTCATACATGTTGGGATTCATTTGTTGGTCAAGTTTTAAGTGATGAAATATTACAATCCATTTTGAAT AAAGCAAGAGGGGGAAAATGAATGACTGCAATAGCAGTTTTGCTTGATCCAAACTACTTATTTTCTTTTCCTTTGATGTTTAAACTGTCAAGGTGAAAAT TCTATAATCTTATGAAAATAGGCATTGTAGTGTCCTGTGCTAGGATAAGGGCCATGACCCTTGTGAGATTTTTTCTTTTTGGGTCTGTCTTCATATTCCA TGATCAAGTAAGAAAACTTGCATGAGTTTTTAAATATCTGAAAAATCACATATCATGCACTAGTTTTCTGCAACAACCTGATTACACTGTCAAATAAAGC TATAAAAAAGâBLAST |
Tissue | pods |
Gene name | LI_gene_142929; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_319847
Blastp | Histone-lysine N-methyltransferase setd3 from Danio with 27.4% of identity |
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Blastx | Histone-lysine N-methyltransferase setd3 from Danio with 27.4% of identity |
Eggnog | set domain containing(ENOG410Y7DR) |
Kegg | Link to kegg annotations (337193) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019420730.1) |
Pfam | SET domain (PF00856.27) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |