Ll_transcript_319816

• Id Trinity: TRINITY_DN46204_c1_g1_i3
• Name Transcript: Ll_transcript_319816
• Sequence: GTTCTAACACAACCATGGCTGTAGCTTCAAGATTCATGTGTACAACTCTTACTCATCACGGTTTTAGCTCAACAACACATAGAACCCATTTGGGTCATGC TCAGTTAACTCTTTCTTCACGCAAGAATCAAATTATTCATTGTTCAGTTTCTGCAAGTGATGCCACAAAAACCTCCTCAGTGATGGAACCCGTTATTCCA TGGGGCTGTGATATTGATTCAGTAGAAATTGCATCAGCTTTGCAGAAATGGTTGTCAGAGTCAGGCCTTCCACCACAGAAGATGGGAATACAAAGAGTTG ATGTTGGAGAGAGAGGACTTGTTGCATTGAAGAATATAAGGAAAAGGGAAAAGCTTCTCTTTGTTCCTCCCTCACTAGTCATAACTGCAGATTCTGTAAG CTTTTCTTTATGTTAGTGTTAATTAAAGTCCCTTGTCTGATTGAACTTCTAAGTTGTATTTACCGCCACTGAGGCAGTTGTGTTGTAGCCCGATACTGTC GCATCATTATGATCTAGTGTCACACTAAAATTTTGGTCTATAATTTGAAAAAAATGGTTGTATCTGCAAGCAAATTTAGTAAGAGTTGCATATAAAGAGC TGGGAGAGAGAAAGATTTGTGTTGATTATTGGACTCATAATTCCATAAATGATATAAATTTATTCAATAACTTAAGCATTTAATCTTACATAAAGTAGCA TTATTGGAGGGGAATCTGCTTATAAGTTATTGCAAAATGGTTAGCAGAAGAGAATTCAAAAAACACTTGTACTCAACTCTACTGAGTTGCAAATGCTCAG TGTTTTAAATTGCAGTTGCGATTGCGATTGCGTTAACGGTTCTGTTTGCTGCGATTAAGGTCATTGTGGTTGTTGTAATGCGGATTGTGGCTGTTGCAGT GTGAATTATTTTGTAATTAAAAAACTACTTTCGAATTCGATCCGACCTGATGTGGTCCAAATGCGGTCTGATGCTGTCATTGTGATTCGGAATCACACCG CAATTGCGGTGTGATGCAGTTGTGGCGGTCACTGCAACCACAATATTACGGCCGCAATTTAAATCACTGACATGCTCTTACTATATTTCAAACAAATATA AAGTAGAGCATTATATAAGGACGTGGCTGTCAACACCAGTACTTGATTTGATCCAAGAAAGTTTCCCTGTGAATTGGTCTGCATAAGAAGTTAGAATGCT ACTCATAATTTAGGTCTTAAATTGTAAAGCACATACTATCTGTGTCAATAGCTTCTTTCCTAAAACTATATGCGATGCCATATGAAGAAGCAGAACAATC ATGGTTGAGTAAGTATCTTCTTTCCTAAAATTATATGTGATGCCATATGAAGAAGCAGAACAATAATGGTTGAGTCGAATGATCTGTTATTTTGGTTTCC GCTTTCTGGTGTTCGGTGAGATGAAATTTTTTTATTGATATATGGAAACTTTTTTTAAAGTTATACTAAAACACCCGAGTTGGTTCATCATATTGATCTG GGTCAGGTACTTATGCATCTGTATGGGTTATGTCTCTGTATTATGATTGTTAGGAGTGGAGTTGTCCAGAAGCCGGTGAAGTATTGAAAAGGAATTCAGT GCCCGATTGGCCATTCATTGCAACTTACCTCATAAGTGAAGCTAGCCGCATGAAATCTTCTAGATGGAGCAATTATATATCAGCCTTACCTCGGCAACCT TACTCACTTCTTTACTGGTCACAAGCAGAACTAGATCGCTACTTGGAAGCTTCACAGATTAGAGAGAGAGCAATTGAAAGGATTAACAATGTGATTGGAA CATACAATGATTTGAGGCTGAGAATATTTTCCAAATACCCTGATTTATTCCCTGAAGAGGTGTTCAACATAGACTCCTTCATATGGTCATTTGGCATTCT TTTTTCTCGCATGGTTCGGTTACCCTCCATGGATGGAAAAGTTGCCTTGGTTCCTTGGGCAGATATGCTGAATCATAGTTGTGATGTGGGGACATATTTG GATTATGATAAATCGTCGAAGGGGATTGTTTTTACGACAGATCGAGTCTATCAACCAGGTGAGCAGGTGTTTATTTCATATGGAAAAAAATCAAATGGAG AGCTTCTGTTATCTTATGGATTTGTTCCAAGGGAAGGTGCTAATCCTAGTGATTCAGTTGAGTTGCCACTGTCACTCGAGAAATCTGATGAGTCCTATGA GCAGAAGTCAGAACTCTTGAAGAAGTATGGTTTATCAGAATCTCAGTGTTTTCCTATACAGATTACTGGTTGGCCAGTGGAGTTGATGGCTTATGCTTAT TTAGCTGTTAGTCCTTCAAGCTTGAGTGGGAAATTTGAAGAGATGGCTGCTGCAGCATCAAATAAAATTACAAACAAGAAGGATTTGCGATATCCTGAAA TAGAGGAGCAAGCATTACAATTCATACTTGATAGCTGTGAATTCAGTATATCAAAATACAACAAGTTCTTGCAGGTAAGTGGATCACTGGATTTGGATGT GACTTCTCCAAAACAGCTCAACAGAAGACTCTTTCTGAAACAGCTAGCTGTGGATTTGAGTACTAGCGAGCGAAGGATATTGTTTCGTACTCAATATATA TTGCGAAGGAGGCTGAGGGATATGAGATCTGGCGAATTAAGAGCTCTAAAAATCTTCGATGGGTTTCGGAATCTTTTCCAATGAGGGCATTCGCTAGTGC ATTATTGTTCAATTCATACATGTTGGGATTCATTTGTTGGTCAAGTTTTAAGTGATGAAATATTACAATCCATTTTGAATAAAGCAAGAGGGGGAAAATG AATGACTGCAATAGCAGTTTTGCTTGATCCAAACTACTTATTTTCTTTTCCTTTGATGTTTAAACTGTCAAGGTGAAAATTCTATAATCTTATGAAAATA GGCATTGTAGTGTCCTGTGCTAGGATAAGGGCCATGACCCTTGTGAGATTTTTTCTTTTTGGGTCTGTCTTCATATTCCATGATCAAGTAAGAAAACTTG CATGAGTTTTTAAATATCTGAAAAATCACATATCATGCACTAGTTTTCTGCAACAACCTGATTACACTGTCAAATAAAGCTATAAAAAAG
• Tissue: pods
• Gene name: LI_gene_142929;
• Additional information: details;

Expression of Ll_transcript_319816

FPKM

• PAB: 1.4
• PNAB: 6.6
• PS1: 3.3
• PS2: 2.7
• PS3: 3.9
• PW1: 8.2
• PW2: 6.4
• PW3: 7.2

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_319816

• Blastp: Ribulose-1,5 bisphosphate carboxylase/oxygenase large subunit N-methyltransferase, chloroplastic from Nicotiana with 27.02% of identity
• Blastx: Ribulose-1,5 bisphosphate carboxylase/oxygenase large subunit N-methyltransferase, chloroplastic from Nicotiana with 27.14% of identity
• Eggnog: -
• Kegg: Link to kegg annotations (AAC49566)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019420730.1)
• Pfam: SET domain (PF00856.27)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;