| Id Trinity | TRINITY_DN46204_c1_g3_i4 |
|---|---|
| Name Transcript | Ll_transcript_319836 |
| Sequence | ATTTAAATCACCGGCTATAAGTATACTATGATATTGAATTATCTTATATATGATTTATTTGGTTTCATTTTATTCGTTATTATATTATCCTTTGTGACGA ATTTTGTCTATTGCTCGGACCGACTCATATATGAGTTTGATCAATCTTTAGCATCCTAAACTTCTGCTATGAAGATAGAATTGTGTCAGATGGAGGAAAC ATGTAGTTTAGACAAAAAATATGTTGAAATTTTATCATTTGCAGATACTTAGAATAATATCTCCTATCTGCCTTAGTGTTTTTGTTTTGTAACAAACCCC TTAAAATTTATTTATTGATTTCTTGCCTTCCTGGAATGGAGTTAACTTAGTTTTGAATGCTTGTTACAGGCAGCATGGCAGAAAGATTAATGGGGCTATT GTTTCTGATTCTGTTGGGTGCTGCTTGGTCTTGTGATGCAAGACAACTGACAATTGCAAACACTGATCAGCATAGCAATGACACAGAAATCTTGGGTAAC ATTGTTAACTAATGTCATTCTATTCTTTCCTGCATTTTTTTTATATAATTTATGTTGTTTGGTGAAATAGATAGAGTTGGATTTTTATTCACTGTCCCAT TTATCCATCATTATCTAAGAAAGGGGGAAATATGGTTTTAAACCATGGTGCAAAGTTTACTGAGTGATCGCTGGATACTTATTCGTAATTTTAACCACCA ATGGCCAAAACAATATTAGGTTAGCTCTGACGAACAAAGATCTGCTTTCCCAAGTCATGCCTCATGCTATCCCGTGCTAATGAAAATGAAGCAAAACAAC AATAATGAATGTTTAAAATTTTTAATTGACAAAACATGCTTTGATTGACGTGAGATAGCGTATGAGACATGATTTGTGACAACAGATCTTAGTTGGGCTT TGAGAACTAGTTACTTGTCAAAAGTATGCCGCAATAGAGTTGAAGGATGGTGTGGAAAGTTTCTATGTAGTTTGTAATTTAGGAGATATGTCATTTTACC TTAGTGGCTATCTGTGTTTGAGCCAACATAGTTTATGTTCAAAATATATTATTGTCAAAATCCTGCTGTGGAATGTGTTTTCTTAGAAAAAATATGCATT TTATTTGTAAATTAATTAAAACCAAACATTATATAAGAAAAGTGGCCAAATGAATGAGATAATGTAGACAAAGAAATATTCTGGTAATTTCTGTATGATA ATTGATAAACTCACATTCCCCCTTAAATGAGCCATATTATGAAAGACTCCAGTGATAACTTGGTAAATTGATATCTGATTATGTGTTAGTTCCTTCCTGC ACATGAGAGAAACATATAATGGCCAATGCTTTTGGAATAGAAGCAGATTGCTAATGTTGTCACTGACATTTATTCTTTGAATTTATATTATTTTTTGGGT CTATTCTGTCACCCTATTGTTTCTCCCAATCTGGATTTTATTTCTAATAGTATTGAACATTAATTTATGTTCATCAAATATAGCTTATTGAATTGCTCTA ACCAATTTGCATAGATTCTCATGTCCACTTTATATGGGAAAGGAAATCAGTCCTAACACTGTACTTCTTTCTTTATGCTTAATTAATAAACTCCCTTTTT ATTTAGATAAAATGCTATGGCATAGGTGAAGTTTTCATACTCAAGCACCTTTAATAAGTTTAGCACTAAAGGTGTCAATCAATGTCTTACATTTACCACA ATTGTTAAAAATTGCGAGAAAATGCTGCAGTTGCAGTACACAATGGCTCTCGTGATTCCGTTGTGGCTGCAATTGCGGTTGCCGAGTGCAATTCAGAATA CTGGTGCCAATTTATCAAAAATGTAGCTTGACTGAACATAATGTGGGAGTCTTACACTTTTACTTAAGGAGAATGATATCTGTACATTATATTAGAATTT GTAATGCAAATGTTGCATCAATAATTGATCTTATTGACATATCTTCCAAATTCAGTACTAAACAGAAAAACAGATGGGTGTGCGCTCTGTGAGCAGTATA CAGCTGAGGCACTTGATTATCTGGACGATGAGAATAACCAAAATGAGATCATTGGAACCCTTCATGGTACGTGCTACAGGATGCTTTCTTTCAAGAAGCA GTGCATCGAATTGATAGATTACTATGCTCCTCTATTCTTCTCACAAGTAGCTTCAGCTCAGCCCAGAGAACTCTGCAAAAAGGTCAACCTCTGTCCGTAC AGCACAAAGATTTCTTCAAAAGTTCAAGAAAATAACTGTGACTTTTGCAAAGATACTGTTACATCCTTAGTGGTTAAGTTGAAAGATCCTGATACTGAGC TTCAGATACTGCAAACGCTGTTGAAGGTGTGCGATTCTATGGAGAAGTTAAAGAAGAATTGCAAGAAGATGGTTCTTCAGTATGGACCTTTGCTCTTTCT AAATGCAGAGAATTTTCTGAAGCCAGAAGAGATATGCACTGCATTACATGCATGCCCAGCTACCTTGGTTTCTGACTCTTAAATCATGGGCAAAGGGTTC CACCTGATTTATGAAGAGCTTATTGCTTTGGTTGAAAAACTACTATATGAAGAAATACCATTTGTGAAATATCTATAAGTTTGGATTTTTATAATTATGA AATACCAACTTACATTAGATATCTTCATTTTAAAAGCTGGGAAAGTGTTGTTTCATGATCATACGATTGCTTTAATGTTAATGTAAAATTTCAACCCTTT ATTTTCATAATCATCAATCTTGCAACTACAATAATTTAC BLAST |
| Tissue | pods |
| Gene name | LI_gene_142931; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_319836
| Blastp | Prosaposin from Bos with 29.1% of identity |
|---|---|
| Blastx | Prosaposin from Bos with 28.07% of identity |
| Eggnog | surfactant protein B(ENOG410XSI5) |
| Kegg | Link to kegg annotations (281433) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019459914.1) |
| Pfam | Saposin-like type B, region 2 (PF03489.16) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |