Ll_transcript_319830

• Id Trinity: TRINITY_DN46204_c1_g4_i3
• Name Transcript: Ll_transcript_319830
• Sequence: CTCACTTTGGTCCCATTCTCTCTCTCTCTCTTTCTCTCTCTCTTTCTCTCTACCATTGCATAGCATAGCATATCAGTGCAGCAGAAGAAGACACTGCTCC TCGTTTTCCACTTTCTCTTTCTTTTTTAAGAACCCATTTCTTCATACTAAACACCACTCATTCATCAAGGTTTTGGTGCTTTTTTTACTTTGCTTCATAG AATTCCTCAATTTTGGAGCAGCTCAATGATTTTGGACACTCATTTTCTGTGACATGATGAAGAATTTATGCTCTGAGAAACTAGCTGTGGGATTTGCACT TTGGAATGAAGGATAGGCAACGGTGGCGAGCTGAAGAGGATGCTTTATTATGTGCTTATGTCAAACAGTACGGTCCTAGAGAATGGAATCTTGTGTCTCA GCGCATGAACACGCCTCTTAATAGGGATGCCAAGTCATGCTTAGAAAGGTGGAAGAATTACCTCAAGCCTGGTATTAAGAAAGGATCGCTTACCGAGGAA GAGCAGCATCTTGTCATCCATCTTCAAGCAAAACACGGAAACAAATGGAAGAAAATTGCTGCGGAAGTCCCAGGTCGAACTGCTAAGAGGTTAGGGAAGT GGTGGGAAGTATTCAAAGAGAAGCAGCAAAGAGAAACAAAGGTGATTGATAGAACCGTCGACCCGATAAACGATAGCAAGTACGAGCACATACTAGAGAG TTTTGCGGAGAAACTAGTGAACGAGCGCCCTTCGCCATCGTATGTTATGGCCTCTTCTAATGGTTCTTTTATACATACCGATGCAGCAGTGAATGCACCA GCAATGCTTCCTTCTTGGCTTTCGATTTCCAACTCTAATAACACTGCACCTGTTAGGCCACCTTCACCGTCCGTGACACTAAGTCTTTCTCCCTCAGTAG TGGCTGCACCTCCTCCGTGGATGCAATCCGTAAGAGGGCCGGACAACGGTCCTCTTGTTATGGGCAACGTAACGCCTCACGGGTCTGTTTTAGCAGCATA TGGTGATAACATGCTTTTGTCCGAGTTAGTGGAGTGCTCTAAAGAGTTGGAGGAAGTGCATCATGCTTTGGCAGCACATAAGAAGGAAACAACATGGCGG TTAAGCCGGGTGGAGTTGCAGCTGGAGTCAGAGAAGGCGAGTCGGAGGAGGGAGAAGATGGAAGAAATAGAAGCGAAGATTAAAGCACTTCGGGACGAGC AGGCGGCTGCCTTGGACAGAATTGAAATGGAATACAGGGAACAGTTGGCGGTGTTGAGAAGAGATGCAGAAACCAAGGAGCAGAAATTGACCGAGCAATG GGCTGCGAAGCACTCGCGACTTACGAAGTTTCTAGAGCAGGTAGGATGCAGGTCAAGGCTTGCTGAGCCAAATGGAAGATAGATAAACATCACTCAAAAG TTGGAACTAGTTTTCTTCTGATGCCTTTATTATTATGCAGTTTATGGTCATGGTTATTTTGTTATTATGCCTATTCTAAAATGTTATTACTCATTTCCTA TCTATTATAAAAACTTGAGAAATTTGCATTTGCATCTTTATGAATATGAAAACTTTGTTAAAAACCAAATTTCCTGAATGATACATGTCCTAAGTATAAA ACACTAGGATGCAGATATTTTCTTACTTCTTT
• Tissue: pods
• Gene name: LI_gene_142932;
• Additional information: details;

Expression of Ll_transcript_319830

FPKM

• PAB: 3.4
• PNAB: 48.3
• PS1: 33
• PS2: 17
• PS3: 17.6
• PW1: 37.6
• PW2: 17.8
• PW3: 14.4

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_319830

• Blastp: Transcription factor AS1 from Arabidopsis with 64.4% of identity
• Blastx: Transcription factor AS1 from Arabidopsis with 61.48% of identity
• Eggnog: Myblike DNAbinding domain containing protein(COG5147)
• Kegg: Link to kegg annotations (AT2G37630)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019460680.1)
• Pfam: Myb-like DNA-binding domain (PF00249.30)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;