Ll_transcript_320707

• Id Trinity: TRINITY_DN46205_c0_g1_i2
• Name Transcript: Ll_transcript_320707
• Sequence: TGTAATTGAACTTCACGGTTTATTATTTATTAATACTCCCCAATTATAAACTAAACTAGAGATAAATAGTAACAAATTTAGGGACCGAAAATATATTGTT TCAAAAGGTTCAAATTGCAAATAAAATTAATGACCATGTTATCACTATAGCACAAGCCACAAGGTTGGGGTTTTACAAAATCTCTATTCTTCTTCTCAGT TTGGTTCAGAATAGCTAGCATAGAGAGTTAAAAGTGAGAAAGCGATGGAAGGTGTATCCTACGCGCGCATGCCCAGAGTCAAAATCCGTGAACTCAAAGA CGACTACGCGAAATTCGAACTCCGCGACACCGATGCCAGCATCGCCAACGCGCTCCGGCGCGTGATGATCGCCGAAGTTCCCACAATCGCCATCGACCTG GTCGAAATCGAAACGAACTCGTCGGTGCTGAACGACGAGTTCCTAGCGCACCGGTTAGGGTTGATTCCTCTGACGAGTGAGAGAGCAATGTCGATGCGAT TCTCGCGTGACTGTGACGCGTGTGATGGTGATGGACAATGCGAGTTTTGTTCCGTTGAGTTTCATCTCAGAGTGAAGTGTATGACTGATCAGACACTAGA TGTAACGAGCAAAGATCTTATAAGTTCTGATCATACTGTTACTCCAGTTGATTTTAATGATTCTTCTCTTATTCAATCTTCTGATGTTAATACTAATAGG GGGATTATAATTGTGAAGTTAAGGAGAGGACAAGAGCTGAAGCTTAGAGCAATAGCTAGGAAGGGTATTGGTAAAGATCATGCTAAATGGTCGCCTGCTG CAACTGTCACTTTCATGTATGAACCAGAAATCCACATAAATGAGGATTTGATGGAGTCCCTGACACTTGAGGAGAAAAAAGAATGGGTTGAAAGTAGTCC TACCCATGTGTTTGACATTGATGTAGTAACTCAACAGGTTGAGTTTTTTCTGATTTGTTTTCTTTAAATTTTGGTTATGCACTTCAGACTGATTTCATCA CTACTGCTAGTATTACTATTATCTGATCATTATCTGGTGCTTAATATTTGTTTTGTTGCTTACATTCCTTTTTTGAAATTATCTCAAGACATGCACTTTC GGTACCTCACTAATTGTTTCTGGGCAATCTGTGATAATATACTTGTCTTGTACGCTATGTACTGTCTATAATGCGGCTTGTAAGCTTGTTTTGATTTTAG GGTTTAGATAGAATGGAGAATATAGAATTAGGTAAGATAAGTATGTTGGATAACAAATATTTTTCTGCATCTCTTTGACCTTTTGCATTGAAGTGGACAA GAAAGTATAATTAGACGCACTTGTTTTTTTTCTGCATTCAATGATAGAACCTGTTATTTGATGTTATGGAATGATTGCATGGTGCTTCCCGGGAGTAAAA TTTGTTTGTTAGTGAACTTGAAGACTGTTTTTTCAATTGTTTATGGGGACAACCTCTAATGTAAGCTTACAGAACCATACATATATTGAAGGCATACACA GCAACTGAGGGACCAATATTCTCCAGTTTTTCTTCCCTCAATTTTTTTCTTCTTCCCTTTGCCATTAATCCTTTAGAATGAGAGGGGAATTGTTTTAAAT TGCTTCCGTCACTCCGATGTCGAGGCTGGGTAATAGGAAAATTCTTCACTTAAAACTTCATGCAGTGTCATTCTGGAAGGTGAACAAACTTGATTCCTGG AAAGATTTTGCATATAAGATACAACTTCAGTGCTGAAAGTGTAAAAAGAGACATTGCTGGAATGAAGGTCAAGGATTTAACTGCATCAAGACTAGTCTGG TCCTAAGCTGCCAATTCCTTAATGAATACGAGTCTGAGGCTGTACATAAATTTTAAATAAGATGTTGGTATCAAGATTTGTGATACATCTATAGCATAAA TGATTGTTGCAGCATCTCCAGGAGCATTATCTGGATTATGGAGAAGATATTGATACACTTTCTGCCAAAGCATTAAGAGTTATTGAAATTGATGTCTTCT CTATCCAACTATTTCAACCACTTTGTGCTGTATACATTTTTGTCTTTGTCAATTGTTGATATATGTTACTGAATACCCATTTCCGTCTTATAATATATTT CTTTTATCAAATAAAGAAACATTTGAAGATTCTGTTTGTGATTTGGTACTATGAATCCTTCATTGGTGTATTTTGCATTATTATTATTATTAAAACGCTT AAATATATTTTTAGCCCCTGCAAATATAGGAAAATTTGGTTCTAGTCATACAATTTATTTTTAAGTTTTAAGTCTCTACTTTAGTTGATCAGTTTTTGTT TTAGTCCCTGTTACTCCATTAGTGATGCATCTACACCACAATTGGTCATGTCATCTATTAATATGACATGTGTCATATGTGAGTGTTAGCTACATTATCA TTAGGAACTAAAATCAAAATTTTGGAATATAAAACAAAAAAAGTAAAATTGTAAGGACTAGAACCAAAATTCGGTAAATCTCCATGGACTAAAAAGCATA TTTACTCCTTATTAAAACATAAAGATCAAAGTTTGCAATCCTTTGGTTGCTCTGTCTTGAGTTCATTTATTGTGGCTAAGATTTTAGCTTTTTATCAGGT TACAGTGGTTGATCCTGAGGCATACACCTACGATGATGAGGTGATTAAGAAAGCAGAAGCAATGGGCAAACCTGGACTAGTAGAAATCAATGCAAAACAG GATAGCTTCATATTCACAGTTGAATCTACTGGTGCTGTTAAAGCTTCTCAGTTAGTACTAAATGCCATAGAAATTCTCAAGACGAAGCTGGATGCTGTGC GGCTATCCGAAGATACCGTGGAGGCTGATGACCAGTTTGGTGAGCTAGGTGCGCATTTGCGAGGGGGTTGATCAAGTCGGTATACCGTGGATGCTGTGTT TTTCCTGAACTTGTTTTGTTGCATGCTGTGCTTAACTGAATAGCTGCCAGCAGGTGCTTCCTCATTGCACCAAAGATGCTAATTGTCATTATGATCCCTT TTATATAAACAGTTATCTTTCAAATTTAAGCCAATTAAACAGTGCTACCATGTGATATAATCTATTTTCTTTTTCCTGTCAGTTGTGGGTATGGTATGTT GATGTTTACACTTGAAGCAGTTGTGCTTTCATTCCATCCACTTTTAAGTATATAAATGAATTTAGGAACTGGTATTCACTTGAGCTTTAAAACATCTTTG TCATCAGTTGCAAAGGGTAGAAAATCGTTAGTCATTGAGACTAACTACTTATTTTCACCACTTACAAGTTACAAT
• Tissue: pods
• Gene name: LI_gene_142941;
• Additional information: details;

Expression of Ll_transcript_320707

FPKM

• PAB: 0.9
• PNAB: 8.1
• PS1: 9.5
• PS2: 5.6
• PS3: 8.4
• PW1: 5.5
• PW2: 4.4
• PW3: 3.5

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_320707

• Blastp: DNA-directed RNA polymerases II, IV and V subunit 3 from Arabidopsis with 78.97% of identity
• Blastx: DNA-directed RNA polymerases II, IV and V subunit 3 from Arabidopsis with 78.97% of identity
• Eggnog: DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (By similarity)(COG0202)
• Kegg: Link to kegg annotations (AT2G15430)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019422056.1)
• Pfam: RNA polymerase Rpb3/Rpb11 dimerisation domain (PF01193.23)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;