Ll_transcript_320709

• Id Trinity: TRINITY_DN46205_c0_g1_i4
• Name Transcript: Ll_transcript_320709
• Sequence: TGTAATTGAACTTCACGGTTTATTATTTATTAATACTCCCCAATTATAAACTAAACTAGAGATAAATAGTAACAAATTTAGGGACCGAAAATATATTGTT TCAAAAGGTTCAAATTGCAAATAAAATTAATGACCATGTTATCACTATAGCACAAGCCACAAGGTTGGGGTTTTACAAAATCTCTATTCTTCTTCTCAGT TTGGTTCAGAATAGCTAGCATAGAGAGTTAAAAGTGAGAAAGCGATGGAAGGTGTATCCTACGCGCGCATGCCCAGAGTCAAAATCCGTGAACTCAAAGA CGACTACGCGAAATTCGAACTCCGCGACACCGATGCCAGCATCGCCAACGCGCTCCGGCGCGTGATGATCGCCGAAGTTCCCACAATCGCCATCGACCTG GTCGAAATCGAAACGAACTCGTCGGTGCTGAACGACGAGTTCCTAGCGCACCGGTTAGGGTTGATTCCTCTGACGAGTGAGAGAGCAATGTCGATGCGAT TCTCGCGTGACTGTGACGCGTGTGATGGTGATGGACAATGCGAGTTTTGTTCCGTTGAGTTTCATCTCAGAGTGAAGTGTATGACTGATCAGACACTAGA TGTAACGAGCAAAGATCTTATAAGTTCTGATCATACTGTTACTCCAGTTGATTTTAATGATTCTTCTCTTATTCAATCATCTGATGTTAATACTAATAGG TATTTCTTTTTCTTCTTCTTTTTAGGGTTTCGTTAAAAGGGGTTTCTTTGTATTTAACTCGGTGTTTTTTTTCTTTCTATTTCATTTAAATGGGTCTTCT TCGTTTTCAATTGGGTATTTGTTTCTGGCTTAAAGCTTTTGTTTTTAGTTTTTTGTCTCGTTTTTATGTTACCTTCATTTTCAACTGGCTATTTGTTTAT TTATTTATTTAAATGCTGTTCTTTGTTTTCAAGTTTCAACTGGGTATATTTGTTTTCCTCTCTTTTCGAATGGGTGCTCTGGCATAATTATTGTTGTTGT TTACGTTAATAACATGACAATATTAATTTTTTTCAACTGGGTATTTGTTTTTCTTGACTGGCCGACTAGGCAATCCAATCTTGCATTTTGTTTGTTGTTT TCCTTTATGCTGTTACTGTATAAATTGTTGGGATTTTAGGGCAAGATAATTTTTGGTTTAAATCTTAGTGCAACTGTTTAGTTTTTGAGGGAAAGAGAGG GTGGCCCAGCGTACGAAACACCTGTGTGGTGTGGTACGATTATGGTAGATATTTGCAGTCCTATCCTGCAAGCGTAGAGGTTATTGAACCTGTGAAGCTG GGACATCCAGGTCACATGGTAGCAACAATCTTATTATTGCACAAAGGCTCACCCTCAAATTTTGGGCAAAATAATTGTTTTTTAAAATCTAATTTAGATG GCTCTTCTTTGTTTTAAACTGGGTATTCTTTGATATTTGTTGTGTTTCTGAATGCTATGGCATTGTAAGTTTTTGGTTTCATAGTAGAATTGTGTAATTT GAGTTGTTCCAATTCAGGGGGATTATAATTGTGAAGTTAAGGAGAGGACAAGAGCTGAAGCTTAGAGCAATAGCTAGGAAGGGTATTGGTAAAGATCATG CTAAATGGTCGCCTGCGGCCACTGTCACTTTCATGTATGAACCAGAAATCCACATTAACGAGGATTTGATGGAGTCCTTGACACTTGAGGAGAAAAAAGA ATGGGTTGAAAGTAGTCCTACCCGTGTATTTGACATTGATCCAGTAACTCAAGAGGTTTTGGTGATTGACCCTGAGGCATACACCTATGATGATGAGGTG ATCAAGAAAGCAGAAGCAATGGGCAAACCTGGGCTTGTAGAAATCAATGCAAAACAGGATAGCTTCATATTCACAGTTGAATCTACTGGCGCTGTTAAAG CTTCTCAGCTAGTACTGAATGCCATAGAAATTCTGAAGACGAAGTTGGATGCGGTGCGGCTATCTGAAGATACCGTGGAGGCTGATGATCAGTTCGGGGA GCTAGGTGCACATTTGCGAGGAGGATGATCGAATCGATGGAAGGATTTCACTCTTTGTTTTCCTGAACTTGTTTGTTGCATGTTGTGTTTAACTGAATAG CTGCAGCATGTGCTACCTCATTGAACCAGAGATGCTAATTGTCATTATGGTCCCTTTTAGATAGACATTTATCTTTGGAATTTAATACTATATGATATAA TCTATTATATTTTTCTTGTGTCAGTTGAGTTTTTGAACACCTTTGTCATATGTAGCATACTTAGAATACTAGTTAAATGTATTGGTGGCAGAGCTAATTT AGTTATATAATGAATTATAAACAAATGAAATTGTTTAAAAA
• Tissue: pods
• Gene name: LI_gene_142941;
• Additional information: details;

Expression of Ll_transcript_320709

FPKM

• PAB: 0
• PNAB: 3.8
• PS1: 5.1
• PS2: 2.5
• PS3: 3.2
• PW1: 2.3
• PW2: 0.8
• PW3: 1.4

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_320709

• Blastp: DNA-directed RNA polymerases II, IV and V subunit 3 from Arabidopsis with 78.63% of identity
• Blastx: DNA-directed RNA polymerases II, IV and V subunit 3 from Arabidopsis with 81.98% of identity
• Eggnog: DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (By similarity)(COG0202)
• Kegg: Link to kegg annotations (AT2G15430)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019445856.1)
• Pfam: RNA polymerase Rpb3/Rpb11 dimerisation domain (PF01193.23)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;