| Id Trinity | TRINITY_DN46206_c0_g1_i1 |
|---|---|
| Name Transcript | Ll_transcript_319300 |
| Sequence | CTAAGGCAAAAGCCATGCATAATCATATCTATCAACCTCTGACCAAGAACATAAGCTATCACGTAGCTTGCACCAACGTTTGTATCCTCGTCCGTGACTT CCAACCGCTACCATTAAGCACTAACCTATTCCCTTTGCTCACGCTTTCTTTGCAAACCAGACACGTGTCTTACGCCTCACCCTTCCAAAATTATCTCTTC TCAGTCCCATTTTTTTCCAAATTTTCCCATCCCCATAACAAATCTCACAATACCCCACACTCATGTGCTTAACTCACTCTCATGCTTCCAACAAAAAAAT GTCTGATGATCTATTGGATCCGATGATTTGATTTTTCTAATTACATTTGTTTGTTGAAAGTGATAATTACAAATTTAAAATAGTGAATAATTATATAGAC TAATACAAAAATGCGTTTATATGGACAATTTATAGATATTTCACTTAAAAGTTTATATTATATTATTAAATAGTGAATGATTATATAGAAGATGTGTAAG TTAGTATAATCATTGTGCAAAACATTTCATATTTTTATAAATAGAGAAGAAAAATCTCAGCTTCTCTGATATTTTCTTCTTTCTCTCTTCACAATCACTC CAAAACCATCTTTTTCAAGCCTTTCCTCTTTATTGTCTCTCACTTAAAGTATCATTTTTAGAATCATATCTCTTGATTCTCTTTTGTGGCCAAGCCAATA GCACCATTCCTTAAAATATCTCCACACCCACATTTTCTTTCACCTTATTAATCTTCTCCCTTTCCCAATTGCCCATTTCCTCAATTCCTTAGCTTTATTC ATAGCATTGCTGGAAGTAGAAACTGGAAATGGTTGGTAAAGTAGAGGTGAAAGGTGGTGTTTCTGCTGCAGTTTTAGCCAAAGTTCCTGTGGTGGCTAAT CCATTGGCTGAAAAACCTGATGAGATTGCATCCAATATCAATTACCATGCTCAGTTCAGTCCTCATTTTTCTCCTTTCAAGTTTGAGCTGGAGCAAGCTT ACTATGCCACTGCAGAGAGTGTTCGTGATCGTCTCATTCAGCAATGGAATGAAACATACCTTCATTTTCATAAAGTTGATCCCAAGCAAACTTACTACTT ATCAATGGAGTTTCTTCAAGGTCGAGCTTTGACCAATGCTATTGGAAATCTAAATATCCAAGATGCATATGCTGATGCTTTGCGCAAATTTGGACTTGAA CTTGAAGAAATAACAGAGCAGGAGAAGGATGCTGCACTAGGAAATGGTGGTCTCGGTAGGCTAGCATCTTGCTTTTTGGATTCTATGGCAACATTAAATT TGCCTGCTTGGGGGTATGGTTTGAGGTATAGACATGGGCTTTTTAAGCAGAGAATCACCAAGGAAGGGCAGAAAGAATTTGCAGAGGACTGGCTTGAGAA GTTTAGTCCCTGGGAAGTTGTGAGGCATGACATTTTGTACCCCATCAGATTCTTCGGTCGCGTTGAGGTTAATCCTGATGGAAGCCGAAAATGGGTAGGT GGAGAGGTTCTTCAAGCACTGGCTTATGATGTGCCAATTCCAGGATACCAAACCAAGAATACCATCAGTCTTCGCCTCTGGGAAGCAAAAGCCCGTGCTG AGGATTTTGATTTATTTTTATTCAATGATGGACAGCATGAATCTGCTTCGGTGCTTCACTCACGAGCTCAACAGATTTGTGCGGTTTTATATCCTGGGGA TGCCACGGAAGATGGAAAACTTCTACGGCTGAAGCAGCAGTTCTTTCTCTGCAGTGCATCACTCCAAGACATAATTTCCCGATTTAAGGAGAGGAGACAA GGACCATGGAACTGGTCCGAATTCCCGACAAAGGTTGCTGTACAATTGAATGATACTCACCCTACCCTTGCAATACCAGAGTTGATGCGATTACTTATGG ATGATGAAGGTCTTGGATGGGATGAGGCTTGGGATGTGACAACAAGGACAATTGCATACACTAATCATACTGTCCTCCCTGAAGCGCTAGAAAAATGGTC TCAGGCTGTAATGTGGAAGCTGCTTCCTCGCCATATGGAAATCATACAAGAAATAGACAAGAGAGTAAGTTGCTTACCTTCATCGTTTCTCTTTAATATA CTCCATGAAAAGTGTAATTAAGCACTAATACTGATACAAGTATCATATATGATAGGCCGAAATACCTATTCTTAAAAAATAGATAATACGATGCATTTCG GATAAAAAAAATATGCCCATAAATTTCGTCAAACATAGTATACATATAATTGTTGCTCTGAAAATCCAAATAATGATCATATTTCTCTGAAATTACTAAA TGCAAAATGAAAATCATATTGTCACAAGAAATAATTGCTTATTGCCCACAAATAGGAAAGTATCCATCTAGTTCAATCCTTGATCATCATTAGGATGGCT CTTATGTAAATAAGAATAAATGTTTTTTTAGTCTGTGGAAGAAAGGAATAATTGTCACTTATGTAGATGCATTTCATCTTTCTTCTGTATACAATACACA TGATTTGTCTTCTCTTTCCCTGCAATTTCACTTGGTAGAATGCTCTATCTCTCTTCTGCTTGACTTATTGTGCATCATGTTTTTCCCTTTTTTTATCTGC CTGACTATAAAATGTTTTTGTACGATAGTTTGGGTGTCTAAAGAGGTATCGTAAAAGCATTTTAAAATATTATCCAGAAAATATCAGATTTGCAATTTAT TTATTTTTAAAAGAATAATTTTGATACTTCATGGATACATATGGTGAATTATTGAAGAGTATCGGTACCGGATATGAATGTATGAAGGATATTGAACTAT TGAAGTATACATAAAGGATACTGTGATGATATATTTCAATGTGGAAATCATAATATGTTTGCAGTTCACTGTGCTGATAAAAACAACCCGATTGGACCTT GAGAGTGAGCTTTCCTCCATATCCATATTGGACAATAATCCTCAAAAGCCAGTGGTTCGGATGGCAAATTTGTGTGTGGTTACTTCTCATGCGGTGAATG GCGTTGCCCAGTTACACAGTGACATATTGAAGTCAGAATTATTTGCAAATTATGTTTCAATATGGCCAACTAAGTTCCAAAACAAAACCAATGGCATTAC ACCTCGAAGATGGCTTCGCTTTTGCAGTCCTGAGCTAAGCAGTATAATCACCAAGTGGTTAAAAACTGATCAATGGGTAACCAATCTTGACTTACTGACA GGTCTTCGGCAGTTTGCTGACAATGAAGATCTGCAAGCTGAATGGCTGTCTGCAAAGAAGGCTAATAAACAACGCTTGGCACAATACGTTCTGCAGGTGA CTGGGGAGAGCATTGACCCTGATAGTCTTTTTGACATTCAGGTCAAGCGTATCCACGAATACAAGAGGCAGCTACTAAATATCCTCGGTGTTATCTATAG ATACAAGAAATTAAAGGTATGAGAAACAACCATATTGTTAAGTTGTAAATGCCTATTGTTCTAACTAATTCATCAATATTTTCTGTCAACACTTTTAACC CGAGTTCATAATGAGTCGTGAGTACCTCTGTCTGTATCCTTGCACCTCAGAAGCTATTTTAACAATGCTATCTCTTTTTCTGGTATACATTAATAATGAT AATTAAAGTATTTAACAGCTATCCTTAATGTGGTCTTAGGTATCATACTAATTCAACATTAATGCTGTCTGGTATTGTATTTCATGATTCATCAACTAAT ATACAGGAGATACCTGTCACTGTATTTTCGAAATAATTCCAGTGTTATACAAAGATATGTTCTGTACTGAAGATATTCCTTGTAATTAAACTGTAATAGG AGATGAGCCCTGAAGAGCGGAAAAATACAACTCCACGCACTGTGATGATTGGAGGAAAGGCATTCGCAACATATACGAATGCTATTAGAATAGTCAAGCT GGTCAATGATGTTGGCGCTGTTGTCAACAGTGATCCTGAGCTCAATAGCTACCTGAAGGTTGTGTTTGTCCCAAACTACAACGTCTCTGTGGCCGAGGTG CTGATTCCGGGCAGTGAGCTATCACAGCATATTAGCACTGCAGGCATGGAAGCAAGTGGCACAAGCAACATGAAATTTGCTTTGAATGGGTGCCTCATAA TAGGTACTTTAGATGGAGCTAATGTCGAAATCCGGGAGGAGGTTGGTGAGGACAATTTTTTCCTCTTTGGTGCAACTGCTGAAGATGTCCCTCGGCTGAG GAAAGAAAGAGAGAATGGACTGTTCAAACCTGATCCTCGATTTGAAGAGGCAAAGAAGTTTATTAGGAGTGGAGTGTTTGGAAGCTATGACTATAACCCA TTGCTTGATTCTTTGGAAGGAGATTCTGGTTATGGTCGTGGTGATTACTTTCTTGTTGGTTATGACTTCCCAAGCTACATGGATGCCCAGGAAAGAGTTG ATGAAGCATATCGTGATAAGAAAAGGTGGCTAAAAATGTCTATTTTAAGCACTGCTGGGAGTGGAAAGTTCAGCAGTGACAGAACAATTGCTCAGTATGC TAAGGAAATTTGGAACATACAAGAATGCCGTGTACCATAAGTGCATTCAAGTTTACAAGTGAAGAAATGGTTGAAAAATAATTCACTAAGAAAATAAGAT ATTTTAGCTTTCTATTCAGTTCACCCATCTGTTTTTTTATATGCAAAACTATGCATATTCCATTTTTAGTTAATGTATGAATTTGCTTACACTTTCAAGT TTAGTATTAATGAAAACTACTATTACCATCTTTCTGGTCCAGTTTGATAAAATCC BLAST |
| Tissue | pods |
| Gene name | LI_gene_142943; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_319300
| Blastp | Alpha-glucan phosphorylase, H isozyme from Vicia with 87.82% of identity |
|---|---|
| Blastx | Alpha-glucan phosphorylase, H isozyme from Vicia with 88.31% of identity |
| Eggnog | - |
| Kegg | - |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019449893.1) |
| Pfam | Carbohydrate phosphorylase (PF00343.19) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |