| Id Trinity | TRINITY_DN46214_c0_g3_i5 |
|---|---|
| Name Transcript | Ll_transcript_318826 |
| Sequence | CTACACCATTCATCGCGTGAACAAAATATCCCGTTCCGCTTTTTGCCGCAACACACGTTTCAATCTCTTTCTCTCTCTCTCAAAATATCGCAACTGAAAA ATGGTATCAACAAACCCGAACCCGAAACCCGATGGCTTCTACTTGGATCCCAATGGCATGACCCGAACGGGTCTCAACCCCTTCGCCTCCGCCACCACCG CTTCTTCACCGGTTGATTCCGCCGCGATTTTGTCGGAGGACGCTGCTAAGAAAATCCGAAAGCCATACACTATCACTAAGTCAAGAGAGAATTGGACCGA ACCAGAACATGACAAGTTCCTTGAAGCTCTTCAGCTGTTTGATCGTGACTGGAAAAAGATTGAAGCATTTGTTGGATCAAAGACAGCAATACAGATACGT AGCCACGCACAGAAATACTTTTTAAAAGTTCAGAAGAGTGGGACGAATGAACATCTTCCCCCACCCAGACCTAAGAGAAAAGCTGCCCATCCATATCCTC AGAAAGCTTCAAAAAATGCTTCTGCACTCTTACAAGTATCAGGACCTTTTGAATCTCCATCTGCTTTGCTTGAGCCTGGATATATCCTGAAGCATGACTC TCCGTCCCCAGCAATGCTTAAAACTCCTATTACAAACACTGTGGTGCCTTCCAGGTCAAACACCACCTTGCAAGCAACTAATCTATCACATGTGCCCAAA GTGAATAATTCTTGCAGCAGCAGTGAGAGCACTCTTGGAGTGAGGCCGGTTGGTGAGTTTAATGGTCAAGGGAATAATAGCCATTCATTGAGAGTTCTTC CAGATTTTACTCATGTATACAGCTTCATTGGCAGTGTATTTGATCCAAATGCAACTGAGCATTTGCAGACGCTAAAAAAGATGGATCGTATAGATGTTGA GACGGTGCTACTATTGATGAGAAACCTGTCTATCAATTTAACTAGCCCAGATTTTGAGGATCATAGAAAGCTGCTTTCATCATATGAGGTTGAACCGGAA ACAGATAGCTATATAAATGCTGAAAGACCCGTGTCCGATGATCAGTTGAAGAGTGTTATTTAGATGGAGTGGAGGCTAAAAATCTCCTCAATTTTTAGCT ATTGCATGAAGCCAGTGTTTAATGATTTTACATGGTTAAGTGAGATGCCTTCAAAAGCTAACAAGCTGAGAGGTTCCCAGTCAGCCAATGATGATCTTTT AGTTTGTGATTATTGCTCATTATGTCAGCTAAGCAAGGCATTGATTCTCTTCATCATAATGTCGTGTATAGGAAATATCTTGTAAAAGAAAAAATAATGT ATGAATGTACAGTTTTTTGTAGTGCATGTTGGCTGTGTATAGCCGTATAGGTTTTTTTTACTGTTAGTACTTTATCCATCATTCATATGTATGTCGTAGA AATCAACGATGTTTAATATATGAATGATGAATAATGTATTAACAATATAAAAAGAACCGTACTCTCTCAGAGCATATCCTTTTTTTCCCTCTTAATAGTT AAACAAATCTCACAAGAGTCCAGGCTATTCTATCCCTGTAAGCTTTATACTATCAATTATATTTATCTAGTGAGATTTTTTAGGCTGAACATGGAAAAAC TCTATCAAGATACCAAGTTTGATGAAAAGAAGCAATTGGATTATTGTGCTTATTGCCTTTTTCTTTT BLAST |
| Tissue | pods |
| Gene name | LI_gene_142998; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_318826
| Blastp | Protein REVEILLE 6 from Arabidopsis with 59.06% of identity |
|---|---|
| Blastx | Protein REVEILLE 6 from Arabidopsis with 59.06% of identity |
| Eggnog | Transcription factor(COG5269) |
| Kegg | Link to kegg annotations (AT5G52660) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019449701.1) |
| Pfam | Myb-like DNA-binding domain (PF00249.30) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |