| Id Trinity | TRINITY_DN46215_c5_g3_i8 |
|---|---|
| Name Transcript | Ll_transcript_319618 |
| Sequence | GTGCAGGGAGGAGTATTCAAATTGGGCGAGGTTGGTGCTGTGGGTGTTGGCAGAGTTGGCATTGATTGCTGCTGATATTCAAGAGGTTATTGGAAGTGCT ATTGCTCTTAAGATTCTTAGCAATGGACTTTTGCCCATTTGGGTTGGTGTCATTATCACTGCCTCAGATTGTTTCTTCTTTTTGTTTCTTGAGAACTATG GAGTGAGGAAGTTGGAAGGTGTTTTCGCAGTTTTCATTGGAACTATGGCCTTCTCTTTTGCTTGGATGTTCTTTGATACAAAGCCCAGTGAAGAAGAACT TTTGATGGGTACAACTTTATCTAATGACATGGTCTTTTGATCCCAAGAGTTAGTTCAAAAACACTTCGCCAAGCAGTGGAAATTGTTGGTTGTGTTATAA CCCCACATAATGTTTTCCTCCATTCAGCATTAGTACAATCAAGGGACATTGATATCCATAACAAAAGCCAAGTTCAAGAGGCAATAAACTACTACTCAAT TGAGTCCTCAGTTGCACTTTTAATCACTCTGGTGATCAATCTTTTCGTGATTACGGTTTTCGCAAGAGTGTTCTATGGTACAGAACAGGCCAAGGACATA GGACTAGTAAATGCAGGGCAATATCTTGAGGAGAGGTATGGAGGAGGTTTGTTTCCAATTCTCTACATATGGGGTATTGGGTTATTAGCAGCTGGACAAA GTAGCACTATTACAGGCACATATGCAGGACAGTTTATAACAGAAGGGTTTCTGAATCTTAATATAAAGAAGTGGTTAAGGGCTTTGATTACTAGAAGTTG TGCAATTGTTCCAACTATGATTGTAGCAATTGTTTTTAATACATCAGAAGGTTCATTAGATACCTTGAATGAATGGCTTAATGTGCTTCAGGCAATACAG ATTCCTTTTGCACTTATTCCTCTTCTTACTTTGGTGTCCAAAGAGGAAGTCATGGGAACCTTTAGAATAGGACCTGTAGTTGAGAGGGTGTCTTGGACTA TATCTGTGCTGGTAATAATGGTTTATGGATATCTGTTATTAGATTTCTTCCTCTCTGAAGTGAATGGAGTCCTATTTGGTTTTCTGGTCTGCCTTTGTTC TGCAGCATGGATAACATTTATAGCATATCTGGTTAAACATAGTGGTGCTGTTTCTTCTATGCTAGCAAGGTCCCCTAGTTCAAAAGGATTTTTTTCTCTA GCTGGGAACTAATTAAGCTACAAAATCCATAGCATTTTTGGGTTTAAGACTGAATTATGTTGCTGCAAGTTCAAAAGTTGTCAATTTTGCAAGAGGGTCA TTGATATATATAGTGTTATAAAAGGAAGCACTTTTTCAACAGAACTGATTCTGAACTTGGAAAAAGAATGCAAACCCATATAGTAGAGGGAAAAAGTATT ATTTTGCAATGGAGAAAGTACCCTATCATTATGGTGAAAATTGCAAAAGCATAATTCTATATCTATATAATGCAAGAAATTTACTAAATAAACTTCATGC AAGATTATTTTGTACAGCAATTAGAATAAGGTACTTGATTATTAGTTGAAGTGTTAATATACTAATGTATGTAGTCAAAAGGATAAATTATCACACATTG CCCTTGTTAGTTTATACTTTTTTTATAACATCCCTTGTTAATTTATATGTATGTTATGTATGAATGTAGGTGATCTGTGCCATATGGTGAACTTACAATA AAGGGAAATGACACTGGAAATTTTTTATTTCATATCCTAGTCACCCATTATTGGAAAATCCAACGATTTAAATTAGTGAATAAATTTAAACCATTGGATT TCTTTCTTAAGAATAGAGAATGAAGTTTTTTTAAGAGTGAGTGGATCCCCTCCATATAATTGTATAATGTAACAAAAGATTATGATATTTGGGTTCATGT TGGTGCTGCTTATGCAGAAGCAGTTTGCATTTGTCGAGAGTTTAGATACTGATTGGTTGATGAACATTATGTGGTGAATATAGTAATGACTAATGATTAA TCAATGATGAACATTATGTGGTGAATAAAGTGAATCTTAAATTGCTTGATGCAATTAATAGTCAGTGTATACTGTTAGAAATTAACTATCAC BLAST |
| Tissue | pods |
| Gene name | LI_gene_143008; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_319618
| Blastp | Metal transporter Nramp4 from Arabidopsis with 74.76% of identity |
|---|---|
| Blastx | Metal transporter Nramp2 from Arabidopsis with 74.91% of identity |
| Eggnog | H( )-stimulated, divalent metal cation uptake system (By similarity)(COG1914) |
| Kegg | Link to kegg annotations (AT5G67330) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019429264.1) |
| Pfam | Natural resistance-associated macrophage protein (PF01566.17) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |