Ll_transcript_320205

• Id Trinity: TRINITY_DN46216_c2_g8_i1
• Name Transcript: Ll_transcript_320205
• Sequence: GAAAAAAAATGAAATAAAAATACAAGGGGAATTAGATAGCGTTAGGTAATATTGATATCCTGTTAGTGCCACCCACCCCTTTTTAGGTTATTGTGGATTT AAGCGTAGAACACAAAGAACTAGATAAACACTTCAACAAAACCTCCCAAACTATCATAACATCTACATAACCGATTCTGGGTTCGTTTCAATCCTCTTCA ATCAAGGGTTGGTGGGTGAAAAGGAATGATTTTTTTTAATCTTAAATAACACCGAAGGTTTCACATTTTTCTTCAAGGGAGAGACTAAAGTAAGGGTCTA AGATGCTATCTGGCATTGTTTCAAAGTTGAATGCTACCATTTACTGTGGCATTCCTGAAACTGTAACGAGACAACAAAGAGTTCCAACATCCTTGTACAG GAACTCTGTTCTGTCTCTTTCTTCACTGCATTCTACTCATCGCTCTTCACATCATACAAAATCAATGGCTACTTCAGCTTCCAATGCTGTCTTGGGAGAT GTTTACGTCGACGACTTAGCCTCGAGCTGTGGCAATGTGCTAGACTTAACAAAACCTGCTGGTGTGTACTTCAAAGATAGAACTCGTAAAGGTTGTTTGA GAGCTAGTGTTATTCTAAGAAGATCACAACCTTTGTATAGTACTCTTTCTGTGGGTTCCACTTTTGATGCTGCTAATTGGAGGAATAGGAATTCGAGCTT CCTTCGTGGACCGTGGCCGAGGAAATTCTCTACATCAAGCTCATCTGGGACTGCACATGATGTTTCATCTGATGGCAGCACTCCGGACCAAACTATTGCT GGCCGCAAGGTCTTGAAGATGGTTTCAGGATCAAGTTACTTGCCACATCCAGCTAAGGAGGAGACCGGAGGAGAGGATGCTCATTTTATCTGCGGCGATG AACAAGCAATTGGGGTTGCAGATGGTGTAGGTGGCTGGGCAGATGTTGGTGTTAATGCGGGATTGTTTGCCCAGGAACTTATATCCAATTCAGTGAGAGC AGTTCAAGAGGAGCCCAAAGGTTCCTTTAATCCAGCAAGGGTGTTAGAGAAGGCACACTCAAAAACAAAGGCCAAGGGTTCATCAACAGCTTGTATAGTT GCCCTTACTGATGAGGGATTACAAGCTATTAATTTGGGTGACAGTGGGTTCATTGTGGTTAGAGATGGAAGCACCATTTTCAGGTCCCCTGTTCAACTGC ATGGCTTCAATTTCACATTTCAATTGGAGAGTGGCAATGGAGCTGATCTACCCAGCTCTGGTGAGGTTTTTACATTACCTGTTGCCCCGGGAGATGTAGT CATTGCTGGAACTGATGGCTTATTTGACAACTTGTACAATAATGAGATCAGTGCAGTAGTTGTAAATGCAGTTAAAGCTGGACTTGAACCCCAAGCAACT GCTCAGAAGATAGCAGCTATGGCTCGACACCGCGCACTCGACCGGAATAAGATGACCCCATTTTCTATTGCTGCTCAGGAGGCCGGATTCCATTATATTG GTGGCAAGCTTGATGACATAACAGTTGTTGTGTCATACATAACAAGTTCTACTAGTGAGTGAGTTTTTTTTTTCCGTCTTCACTTCGTCATATTCACATT TCATATTTGTTCTTGGATGGCTATGTGGCCATGCTTGGCTGTCATTTTTGACCTAAATGCATTTATAATTCTTATAATACCTCTCTCAAACTTGACTTAT TGCAACATAATTTTATATTTGAATCATATTTTTTCAATTGCTTGTGCA
• Tissue: pods
• Gene name: LI_gene_143022;
• Additional information: details;

Expression of Ll_transcript_320205

FPKM

• PAB: 6.2
• PNAB: 22.4
• PS1: 7.6
• PS2: 6.1
• PS3: 7.7
• PW1: 13.8
• PW2: 18.6
• PW3: 15.3

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_320205

• Blastp: Probable protein phosphatase 2C 80 from Arabidopsis with 55.04% of identity
• Blastx: Probable protein phosphatase 2C 55 from Arabidopsis with 68% of identity
• Eggnog: Phosphatase(COG0631)
• Kegg: Link to kegg annotations (AT5G66720)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019421443.1)
• Pfam: Protein phosphatase 2C (PF13672.5)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;