Ll_transcript_319414

• Id Trinity: TRINITY_DN46219_c2_g1_i2
• Name Transcript: Ll_transcript_319414
• Sequence: ATTAGATCACAATGCATCTTATAAATGATCAAGTTTAGTTAAAATTTAAGGAGGATCAGAAAGAAAATATAATTTATAATCAATACTAAGGGACATAAGG TTTAATTTATTTTACGAAATTAAAAAAAAAATGAATTGAAGCGTTTCGAAAATTAAATGTCGTTTCAAAATGAAAGATGAAGGGGAATTAGGGTTTGAAA ATGAGAGTAGTAGCTTATTTATATAGAACAGATAATAATAGAGTCGTTATTACAATTGTCCCTTTGCAGCGGAGAAGAGGATCAAGGTCACTTTCGATTT GGGAGGGAAATTTGTAATAAAACCCCAAAAAATTCCTCACAACTTACAATCTAAATCAACGGGACAAAATTTCAACATTCAACATCACCCAGATTTAATT TCTATTCTGTGAAGTAAGGAATATAACATGAGCACTACAGTGCAAAAAACTCCAAGATCTGGTAGGCAGTCATTATTTTTCAAGGATTTGGCTTCACCTG TTTCAACCCGGAGAGGAAAATTTTCAAGTCCGGGCCAGGCAGCTCCAGTTTCTACTCCATGGCGTGAGAACTTTGGTGGTTCAGACCTTCCACCACCTCC TTTTTACACTTTGGAAGACAGATCAGACTTTTCTCCTGAATCCGGTATACCTGATTACCAGGTATCCCCAGAGACTAAGTCAGACCCTAGATCTCCAATG CAATCTTCAAATACGGAATTTTCAACTCCACTGAAAAACAAATCAGAGGCCAGCACATCTTATGCTTTACGTGGAGTGCAGCAAAACCATCAGGACTCAC CAGGTTTGAATTGGTGGTCACCTGTACCTGCAAAGAGTGGCAGCGAGCAAGATGACAAGGCGACGAGTTCACCAGTTGAGGGTGTAATACAGCCTGGTGC TCTGATTACTCTTCCGCCACCACTGGAAGTGGCAAGGCCTGAGGTCAAAAGAAATTCCTTCCCAGCAGGGAATCTCATTGAGGAAGAATGGGTAACAGTT TATGGATTTTCTCCATATGATACTAATTTGGTTTTGAGGGAATTTGAAAAATGTGGTGAAATTTTGAAACATGTTCCTGGACCTAGAGATGCTAACTGGA TCCACATTTTGTACCAGAATCGATCTGATGCCCAAAAAGCTCTTAACAAGAATGGAATGCAAATTAATGGAGTCCTAATAGTAGGTGTTAAGCCTTTAGA TCCCATGCAACGCCAATCTTTGAATGAAAGGCAGAACAATCAGGAATTTATGCCTTTGCCTCTATCCTCTGCTAGAATTTCAGAAACAAGCACACTGAGA GCTTCTTCTCGACCCTATTATCTTCAGAATGGTAACTCAGCTGTTCGCCAGGCAGGAGGTACCATTGCTTCTCCAACAAAATCATTGGTGTCCAAGGTCA TGGATTTGATGTTTGGAGTCTAGATTTAGCTGCTATGGTGAATCAGCCTATTTCATTCTGTTCTGTTGTAAGCAATGGTTTTACTTTCTGCTACTATTCA TGCACAATGCAGAGTTCAGACATATCTTTATAGGATTTGAGTTGTGGAACATTTGCTCTTTGGATCTCAGTTTTTGGAATTTATGGCATTTACTATTTGC AGTTTTATATGGGAATTCTTGGTACCCATATGTACTAAGTAGTTATAGGGAGTGTAGTTCATTACCCTAAACCTTGTTTCATTTTCACAATTATAATGCT TAACATCAAATCAAATGGGCGTATAACTACTTATTGAATATGCACATAAGGTAAACCACTGAACTGAAGTAGCGCCATAATGTAATTATCAACACGTTCA GCACATAAATAATATAATATGGCCATGGG
• Tissue: pods
• Gene name: LI_gene_143041;
• Additional information: details;

Expression of Ll_transcript_319414

FPKM

• PAB: 12.4
• PNAB: 17.6
• PS1: 16.3
• PS2: 10.1
• PS3: 14.3
• PW1: 13.3
• PW2: 13
• PW3: 11.6

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_319414

• Blastp: Nuclear pore complex protein NUP35 from Arabidopsis with 69.58% of identity
• Blastx: Nuclear pore complex protein NUP35 from Arabidopsis with 69.58% of identity
• Eggnog: nucleoporin(ENOG4111ARE)
• Kegg: Link to kegg annotations (AT3G16310)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019458803.1)
• Pfam: Nup53/35/40-type RNA recognition motif (PF05172.12)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;