Id Trinity | TRINITY_DN46219_c2_g3_i1 |
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Name Transcript | Ll_transcript_319408 |
Sequence | TGTTGAGTGGGGCCAAATGCCTGGAATGAAGCCTGGTCCGGATTCCATTGGAATCGTTGCTATTTCTCATGGTTGCACTGGTGTGGCAGCAAGAGCCTGT GGCCTAGTGGGTCTAGAACCCACAAGGGTTGCAGAAATCCTCAAAGATCGGCCTTTGTGGTTTCGAGATTGCCGAGCTGTTGATGTTCTCAATGTGCTGC CCACATCTAATGGTGGAACCATTGAGCTGCTATATATGCAGCTATATGCGCCAACCACATTGGCACCTGCTCGGGACTTCTGGTTATTGCGCTACACTTC TGTTTTAGAAGATGGGAGCCTAGTGATATGTGAAAGGTCTCTTAAAAATACACAAAATGGTCCAAGCATACCTCCCGTGCCGCATTTTGTTAGAGCAGAG ATGCTGCCTAGTGGATACCTGATAAGACCTTGTGAAGGTGGTGGTTCTATCATCCACATTGTTGATCATATGGATTTGGAGCCGTGGAGTGTGCCAGAAG TGCTGCGTCCACTTTATGAATCATCAGTAATGCTGGCCCAGAAGACAACTATGGCGGCCCTACGTCAGCTAAGGCAGATTTCACATGAAGTTTCTCAGTC AAATGTCACCACTGGGTGGGGTAGACGTCCAGCGGCTCTAAGAGCACTTAGCCAGAGATTGAGCCGGGGTTTCAATGAGGCGCTCAATGGTTTTACTGAT GAGGGATGGTCAACAATTGGCAATGATGGTGCAGATGATGTTACGATTCTAGTGAATTCATCCCCGGACAAGTTAATGGGTCTAAATCTTTCCTTTGCAA ATGGATTTCCATCTGTCAGTAACTCAGTCTTGTGTGCCAAAGCATCAATGCTATTACAGGTCTGGGTGCTTAGAAATTTCTACTTGTTTCCTGAAAATTA TAAAATAAAAATTTGAGCAATGAGATGACAAAACACTCCTAAATTGAGTTAACAAGTAAAGTGAGCAAGGGTGCATAAAATCATTTGGTAAGTTAAAAAT CATGATGCATTGTCTTGTCTTTGCATAAGCATTGAGCACCTGTTCCATTTTGAAAAGAATCATGTACCCAAATGATAATTAATATAGTGAATACCTACAT TTAAGCACTTGTTTGATCAGTCAATAACGTCATCAATCAACAATTGATCAACATGCCGTATTTTTAGTATCAAAATTGTTTGTTCTTGTATGTTATGCAC TTATTCTGTTCCCCTAAACAAAAGCATCACCCGTAAACTTTTGAAGTTACCCTTATATTTCTCTGCTGCCATGTTCCATCTCTTTTGTCTAGAACGTGCC CCCAGCCATTCTCCTCCGGTTCCTGCGGGAGCATAGATCAGAATGGGCAGACAACAACATGGATGCTTACTCAGCTGCTGCCGTTAAAGTTGGCCCTTGT AGCTTTTCAGGATCTCGTGTTGCAAACTATGGGGGTCAAGTTATTCTCCCTCTAGCACATACTGTTGAACATGAAGAGTTTCTGGAGGTCATTAAATTGG AAGGAATTGCACATTCTCCTGAAGAGGCAATGATGCCCAGAGAAGTGTTTCTTTTGCAAGTAAGTTTTCCCCTCATGTTGCATGCTCTTTGCTGCGTCAT TTTGGAAATGATGCATACTCAGTTTCCATGTTTTGTCTGATGTGGTACTAATATGTAGATGCAAGTAAATTTGATCTCTTCTTGTAACTTACGCAGAATT TGGCAGAGGACTTGGGTTCATATTTCTGTGTTCTGAACTGATTAAGGATTTTAGCCATCATATAATACTCCAACAAAAATATATACTCAGAAACTATTGA ATGGATTACATGCTAGTTTAGTGCATTATCTTTTGAGTTCATGCTGTTATTGGAATGAGGAAGCTTTGTGTTCTTACCATTGTTTGTGATTTGCTTTCTT ATAGTTCATTGGATGTTGTTTTGGTAGCTATGTAGTGGAATGGATGAGAATGCTGTCGGCACCTGTGCCGAGCTTATATTTGCTCCAATTGATGCGTCCT TTGCTGATGATGCCCCTCTTCTACCTTCTGGATTTCGCATCATTCCTCTTCAATCCGGAAAGGAAGCTTCCAGCCCTAACCGTACCCTCGACCTTGCATC TGCCCTTGACATTGGCCCCACCAAAAACAAAGCTTCAAATGATTATGCCGGAAATTCTGGCTGTGTTAGATCTGTAATGACAATAGCATTTGAATTTGCA TTTGAAAGTCATATGCAAGATCATGTAGCATCAATGGCACGTCAATATGTTCGCAGCATTATATCATCAGTCCAAAGGGTGGCATTAGCACTTTCTCCTC ATTTGAGTTCGCATGCTGGCCTTAGGACACCATTAGGTACTCCCGAAGCACAAACACTTGCTCATTGGATATGCAACAGTTACAGGTGCTATATGGGTGT TGAGCTACTTAAATCCAATATCGAGGGGAACGAATCGGTGCTGAAGTCCCTGTGGCATCACTCAGATGCAATATTGTGCTGCACTCTAAAGGCAATGCCA GTGTTTACTTTCTCGAACCAGGCAGGGCTTGACATGCTCGAGACCACACTAGTTGCGCTTCAAGATATAACTTTAGAGAAAATATTCGATGATCATGGAC GAAAGATTCTCTTCGCCGAGTTTCCTCAGATTATCCAACAGGGTTTTGCATGTCTTCAAGGTGGTCTTTGCCTCTCGAGCATGGGTCGACCCGTGTCGTA CGAGAGAGTTGTTGCTTGGAAGGTGCTGAATGAAGAAGAGAATGCTCATTGTATTTGCTTTATGTTTATGAACTGGTCTTTTGTTTGAAATTATGTTATG AGTATAGGTATTTCAAAGTGTTAAGAACTTAAGATGAAGATTTACTCCCAAAGACACTTATGCTTTGTTGGTTGGTCTATTAATGTATTTTGCTTTTGAA ATTGAGACTTGGATTTCAAGACTATATGTATTTAGTGCTTTCCTATGAAGTGTTAAACATTTGTGATGTGGGATAAATTTTTCTTGATGCATTAACATCT TTCTGAGGGAACAAAAATTAATGATCAACCTAAATTCAG BLAST |
Tissue | pods |
Gene name | LI_gene_143043; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_319408
Blastp | Homeobox-leucine zipper protein ATHB-15 from Arabidopsis with 85.37% of identity |
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Blastx | Homeobox-leucine zipper protein ATHB-15 from Arabidopsis with 84.67% of identity |
Eggnog | homeobox-leucine zipper protein(ENOG410XQ3R) |
Kegg | Link to kegg annotations (AT1G52150) |
CantataDB | - |
Mirbase | far-MIR166 (MI0016616) |
Ncbi protein | Link to NCBI protein (XP_019429328.1) |
Pfam | START domain (PF01852.18) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |