| Id Trinity | TRINITY_DN46219_c2_g3_i2 |
|---|---|
| Name Transcript | Ll_transcript_319409 |
| Sequence | TGTTGAGTGGGGCCAAATGCCTGGAATGAAGCCTGGTCCGGATTCCATTGGAATCGTTGCTATTTCTCATGGTTGCACTGGTGTGGCAGCAAGAGCCTGT GGCCTAGTGGGTCTAGAACCCACAAGGGTTGCAGAAATCCTCAAAGATCGGCCTTTGTGGTTTCGAGATTGCCGAGCTGTTGATGTTCTCAATGTGCTGC CCACATCTAATGGTGGAACCATTGAGCTGCTATATATGCAGCTATATGCGCCAACCACATTGGCACCTGCTCGGGACTTCTGGTTATTGCGCTACACTTC TGTTTTAGAAGATGGGAGCCTAGTGATATGTGAAAGGTCTCTTAAAAATACACAAAATGGTCCAAGCATACCTCCCGTGCCGCATTTTGTTAGAGCAGAG ATGCTGCCTAGTGGATACCTGATAAGACCTTGTGAAGGTGGTGGTTCTATCATCCACATTGTTGATCATATGGATTTGGAGCCGTGGAGTGTGCCAGAAG TGCTGCGTCCACTTTATGAATCATCAGTAATGCTGGCCCAGAAGACAACTATGGCGGCCCTACGTCAGCTAAGGCAGATTTCACATGAAGTTTCTCAGTC AAATGTCACCACTGGGTGGGGTAGACGTCCAGCGGCTCTAAGAGCACTTAGCCAGAGATTGAGCCGGGGTTTCAATGAGGCGCTCAATGGTTTTACTGAT GAGGGATGGTCAACAATTGGCAATGATGGTGCAGATGATGTTACGATTCTAGTGAATTCATCCCCGGACAAGTTAATGGGTCTAAATCTTTCCTTTGCAA ATGGATTTCCATCTGTCAGTAACTCAGTCTTGTGTGCCAAAGCATCAATGCTATTACAGGTCTGGGTGCTTAGAAATTTCTACTTGTTTCCTGAAAATTA TAAAATAAAAATTTGAGCAATGAGATGACAAAACACTCCTAAATTGAGTTAACAAGTAAAGTGAGCAAGGGTGCATAAAATCATTTGGTAAGTTAAAAAT CATGATGCATTGTCTTGTCTTTGCATAAGCATTGAGCACCTGTTCCATTTTGAAAAGAATCATGTACCCAAATGATAATTAATATAGTGAATACCTACAT TTAAGCACTTGTTTGATCAGTCAATAACGTCATCAATCAACAATTGATCAACATGCCGTATTTTTAGTATCAAAATTGTTTGTTCTTGTATGTTATGCAC TTATTCTGTTCCCCTAAACAAAAGCATCACCCGTAAACTTTTGAAGTTACCCTTATATTTCTCTGCTGCCATGTTCCATCTCTTTTGTCTAGAACGTGCC CCCAGCCATTCTCCTCCGGTTCCTGCGGGAGCATAGATCAGAATGGGCAGACAACAACATGGATGCTTACTCAGCTGCTGCCGTTAAAGTTGGCCCTTGT AGCTTTTCAGGATCTCGTGTTGCAAACTATGGGGGTCAAGTTATTCTCCCTCTAGCACATACTGTTGAACATGAAGAGTTTCTGGAGGTCATTAAATTGG AAGGAATTGCACATTCTCCTGAAGAGGCAATGATGCCCAGAGAAGTGTTTCTTTTGCAACTATGTAGTGGAATGGATGAGAATGCTGTCGGCACCTGTGC CGAGCTTATATTTGCTCCAATTGATGCGTCCTTTGCTGATGATGCCCCTCTTCTACCTTCTGGATTTCGCATCATTCCTCTTCAATCCGGAAAGGAAGCT TCCAGCCCTAACCGTACCCTCGACCTTGCATCTGCCCTTGACATTGGCCCCACCAAAAACAAAGCTTCAAATGATTATGCCGGAAATTCTGGCTGTGTTA GATCTGTAATGACAATAGCATTTGAATTTGCATTTGAAAGTCATATGCAAGATCATGTAGCATCAATGGCACGTCAATATGTTCGCAGCATTATATCATC AGTCCAAAGGGTGGCATTAGCACTTTCTCCTCATTTGAGTTCGCATGCTGGCCTTAGGACACCATTAGGTACTCCCGAAGCACAAACACTTGCTCATTGG ATATGCAACAGTTACAGGTATATAAACTTTACTCTCGACATTAGTTCGGCTGAGGCTAGTGCAATTTATTTTTCCGTGGTAAAGGTTGGCTTATCTTGCA TGATGTTTGTTTGACATACTGAAACCCTTTTGTTCCGAAAGTGCGAGACCATCGTTATTCAAGATTTTCCTATGAACGGGAACTAAATTGAATATACTAT CTCATTTAGTAATGAAACTGCAGCTCACAAATTAATCATAGGTTAGATGAGTTGCTTATGGAAAGTGAATTAATAATGTAAATTTCAGATCCAATCTTGT AAATTCACATTATCATTTTTAATATGTAATCAAACACTTTCGCAAATACTAATAGAGACAATTCCATTTAAAATCCAAGATTTCTATGTGTTAGATTAAT ATTTTTCTTTACGTTGTACATAAATTCAGAGCTCTCATAATTTTTGATCCCAATGTTCCTTCACAATTTATCATATTATTTTTGAAATTGGTGTAAAAAC TGAATCCATGGCTATAACTTTGGTTCAAGCTAATGACTAACACTATATTGTCTAAGAAACATATACTGAGGCATAAGCAGTGCTTCAATGTGCATATATT CATCACGTCTAATTTCTAGAAGTGCTATAAAATTTTTATCTGATTGCATGTAACCGGTTTTTTTAATGTCACGTGGTTAGATTTATTACTGAAGGAGACT ACTTGTTTGACAGTAACATACTAACATATACTTCAAACACACAAATCTTATGTTTGACTGTTGTAAAATTTCGTAGGTGCTATATGGGTGTTGAGCTACT TAAATCCAATATCGAGGGGAACGAATCGGTGCTGAAGTCCCTGTGGCATCACTCAGATGCAATATTGTGCTGCACTCTAAAGGTATCATGCTTGAAATTA ATTTTGATTTCATAGTACATGTGTCTATTTCATGCACACCTCAGTCCACAAAGTATTGTTATTTTCTCTAGTACAAAATGATATAAAAAACTGCAGTGAC ATACAAGGTGTCAAATGAGCCAAGCCCGACTAACCCAATAACATATGTCGAATGAGCTATGTTCTGTGGGCCCGGCCTGAATTTGGCGGGCAAGTATTTT GCTTTACAGTAAATTATGTTGTTTTTATTGTCCTATTCTCTTCTCCGTACCTTAAAACGTGTTTTGCCTATAAGGTTGCAAGTCAAATATTGATTCTAGT TCAAGCTATAATCTATTCATATAACTTAAAAAGTAGCAGAAGATGGATGAAATATTCTAAATTATTTTTATGTTTGTCTTTTTTTGTTGTTGCCGTAACT ATAAATTGAATAAAAAATGGTTGCATGTACATCTGTTATTGTAATCTTCTTCCACCTTGTTCGATCGCACATTCATTGTACGTGGTTTATGCAGGCAATG CCAGTGTTTACTTTCTCGAACCAGGCAGGGCTTGACATGCTCGAGACCACACTAGTTGCGCTTCAAGATATAACTTTAGAGAAAATATTCGATGATCATG GACGAAAGATTCTCTTCGCCGAGTTTCCTCAGATTATCCAACAGGGTTTTGCATGTCTTCAAGGTGGTCTTTGCCTCTCGAGCATGGGTCGACCCGTGTC GTACGAGAGAGTTGTTGCTTGGAAGGTGCTGAATGAAGAAGAGAATGCTCATTGTATTTGCTTTATGTTTATGAACTGGTCTTTTGTTTGAAATTATGTT ATGAGTATAGGTATTTCAAAGTGTTAAGAACTTAAGATGAAGATTTACTCCCAAAGACACTTATGCTTTGTTGGTTGGTCTATTAATGTATTTTGCTTTT GAAATTGAGACTTGGATTTCAAGACTATATGTATTTAGTGCTTTCCTATGAAGTGTTAAACATTTGTGATGTGGGATAAATTTTTCTTGATGCATTAACA TCTTTCTGAGGGAACAAAAATTAATGATCAACCTAAATTCAG BLAST |
| Tissue | pods |
| Gene name | LI_gene_143043; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_319409
| Blastp | Homeobox-leucine zipper protein ATHB-15 from Arabidopsis with 85.37% of identity |
|---|---|
| Blastx | Homeobox-leucine zipper protein ATHB-15 from Arabidopsis with 85.37% of identity |
| Eggnog | homeobox-leucine zipper protein(ENOG410XQ3R) |
| Kegg | Link to kegg annotations (AT1G52150) |
| CantataDB | - |
| Mirbase | far-MIR166 (MI0016616) |
| Ncbi protein | Link to NCBI protein (XP_019429328.1) |
| Pfam | START domain (PF01852.18) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |