Id Trinity | TRINITY_DN46219_c2_g3_i5 |
---|---|
Name Transcript | Ll_transcript_319417 |
Sequence | TGTTGAGTGGGGCCAAATGCCTGGAATGAAGCCTGGTCCGGATTCCATTGGAATCGTTGCTATTTCTCATGGTTGCACTGGTGTGGCAGCAAGAGCCTGT GGCCTAGTGGGTCTAGAACCCACAAGGGTTGCAGAAATCCTCAAAGATCGGCCTTTGTGGTTTCGAGATTGCCGAGCTGTTGATGTTCTCAATGTGCTGC CCACATCTAATGGTGGAACCATTGAGCTGCTATATATGCAGCTATATGCGCCAACCACATTGGCACCTGCTCGGGACTTCTGGTTATTGCGCTACACTTC TGTTTTAGAAGATGGGAGCCTAGTGATATGTGAAAGGTCTCTTAAAAATACACAAAATGGTCCAAGCATACCTCCCGTGCCGCATTTTGTTAGAGCAGAG ATGCTGCCTAGTGGATACCTGATAAGACCTTGTGAAGGTGGTGGTTCTATCATCCACATTGTTGATCATATGGATTTGGAGCCGTGGAGTGTGCCAGAAG TGCTGCGTCCACTTTATGAATCATCAGTAATGCTGGCCCAGAAGACAACTATGGCGGCCCTACGTCAGCTAAGGCAGATTTCACATGAAGTTTCTCAGTC AAATGTCACCACTGGGTGGGGTAGACGTCCAGCGGCTCTAAGAGCACTTAGCCAGAGATTGAGCCGGGGTTTCAATGAGGCGCTCAATGGTTTTACTGAT GAGGGATGGTCAACAATTGGCAATGATGGTGCAGATGATGTTACGATTCTAGTGAATTCATCCCCGGACAAGTTAATGGGTCTAAATCTTTCCTTTGCAA ATGGATTTCCATCTGTCAGTAACTCAGTCTTGTGTGCCAAAGCATCAATGCTATTACAGAACGTGCCCCCAGCCATTCTCCTCCGGTTCCTGCGGGAGCA TAGATCAGAATGGGCAGACAACAACATGGATGCTTACTCAGCTGCTGCCGTTAAAGTTGGCCCTTGTAGCTTTTCAGGATCTCGTGTTGCAAACTATGGG GGTCAAGTTATTCTCCCTCTAGCACATACTGTTGAACATGAAGAGTTTCTGGAGGTCATTAAATTGGAAGGAATTGCACATTCTCCTGAAGAGGCAATGA TGCCCAGAGAAGTGTTTCTTTTGCAACTATGTAGTGGAATGGATGAGAATGCTGTCGGCACCTGTGCCGAGCTTATATTTGCTCCAATTGATGCGTCCTT TGCTGATGATGCCCCTCTTCTACCTTCTGGATTTCGCATCATTCCTCTTCAATCCGGAAAGGAAGCTTCCAGCCCTAACCGTACCCTCGACCTTGCATCT GCCCTTGACATTGGCCCCACCAAAAACAAAGCTTCAAATGATTATGCCGGAAATTCTGGCTGTGTTAGATCTGTAATGACAATAGCATTTGAATTTGCAT TTGAAAGTCATATGCAAGATCATGTAGCATCAATGGCACGTCAATATGTTCGCAGCATTATATCATCAGTCCAAAGGGTGGCATTAGCACTTTCTCCTCA TTTGAGTTCGCATGCTGGCCTTAGGACACCATTAGGTACTCCCGAAGCACAAACACTTGCTCATTGGATATGCAACAGTTACAGGTATATAAACTTTACT CTCGACATTAGTTCGGCTGAGGCTAGTGCAATTTATTTTTCCGTGGTAAAGGTTGGCTTATCTTGCATGATGTTTGTTTGACATACTGAAACCCTTTTGT TCCGAAAGTGCGAGACCATCGTTATTCAAGATTTTCCTATGAACGGGAACTAAATTGAATATACTATCTCATTTAGTAATGAAACTGCAGCTCACAAATT AATCATAGGTTAGATGAGTTGCTTATGGAAAGTGAATTAATAATGTAAATTTCAGATCCAATCTTGTAAATTCACATTATCATTTTTAATATGTAATCAA ACACTTTCGCAAATACTAATAGAGACAATTCCATTTAAAATCCAAGATTTCTATGTGTTAGATTAATATTTTTCTTTACGTTGTACATAAATTCAGAGCT CTCATAATTTTTGATCCCAATGTTCCTTCACAATTTATCATATTATTTTTGAAATTGGTGTAAAAACTGAATCCATGGCTATAACTTTGGTTCAAGCTAA TGACTAACACTATATTGTCTAAGAAACATATACTGAGGCATAAGCAGTGCTTCAATGTGCATATATTCATCACGTCTAATTTCTAGAAGTGCTATAAAAT TTTTATCTGATTGCATGTAACCGGTTTTTTTAATGTCACGTGGTTAGATTTATTACTGAAGGAGACTACTTGTTTGACAGTAACATACTAACATATACTT CAAACACACAAATCTTATGTTTGACTGTTGTAAAATTTCGTAGGTGCTATATGGGTGTTGAGCTACTTAAATCCAATATCGAGGGGAACGAATCGGTGCT GAAGTCCCTGTGGCATCACTCAGATGCAATATTGTGCTGCACTCTAAAGGTATCATGCTTGAAATTAATTTTGATTTCATAGTACATGTGTCTATTTCAT GCACACCTCAGTCCACAAAGTATTGTTATTTTCTCTAGTACAAAATGATATAAAAAACTGCAGTGACATACAAGGTGTCAAATGAGCCAAGCCCGACTAA CCCAATAACATATGTCGAATGAGCTATGTTCTGTGGGCCCGGCCTGAATTTGGCGGGCAAGTATTTTGCTTTACAGTAAATTATGTTGTTTTTATTGTCC TATTCTCTTCTCCGTACCTTAAAACGTGTTTTGCCTATAAGGTTGCAAGTCAAATATTGATTCTAGTTCAAGCTATAATCTATTCATATAACTTAAAAAG TAGCAGAAGATGGATGAAATATTCTAAATTATTTTTATGTTTGTCTTTTTTTGTTGTTGCCGTAACTATAAATTGAATAAAAAATGGTTGCATGTACATC TGTTATTGTAATCTTCTTCCACCTTGTTCGATCGCACATTCATTGTACGTGGTTTATGCAGGCAATGCCAGTGTTTACTTTCTCGAACCAGGCAGGGCTT GACATGCTCGAGACCACACTAGTTGCGCTTCAAGATATAACTTTAGAGAAAATATTCGATGATCATGGACGAAAGATTCTCTTCGCCGAGTTTCCTCAGA TTATCCAACAGGGTTTTGCATGTCTTCAAGGTGGTCTTTGCCTCTCGAGCATGGGTCGACCCGTGTCGTACGAGAGAGTTGTTGCTTGGAAGGTGCTGAA TGAAGAAGAGAATGCTCATTGTATTTGCTTTATGTTTATGAACTGGTCTTTTGTTTGAAATTATGTTATGAGTATAGGTATTTCAAAGTGTTAAGAACTT AAGATGAAGATTTACTCCCAAAGACACTTATGCTTTGTTGGTTGGTCTATTAATGTATTTTGCTTTTGAAATTGAGACTTGGATTTCAAGACTATATGTA TTTAGTGCTTTCCTATGAAGTGTTAAACATTTGTGATGTGGGATAAATTTTTCTTGATGCATTAACATCTTTCTGAGGGAACAAAAATTAATGATCAACC TAAATTCAGâBLAST |
Tissue | pods |
Gene name | LI_gene_143043; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_319417
Blastp | Homeobox-leucine zipper protein ATHB-15 from Arabidopsis with 82.57% of identity |
---|---|
Blastx | Homeobox-leucine zipper protein ATHB-15 from Arabidopsis with 82.57% of identity |
Eggnog | homeobox-leucine zipper protein(ENOG410XQ3R) |
Kegg | Link to kegg annotations (AT1G52150) |
CantataDB | - |
Mirbase | far-MIR166 (MI0016616) |
Ncbi protein | Link to NCBI protein (XP_019429328.1) |
Pfam | START domain (PF01852.18) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |