Id Trinity | TRINITY_DN46237_c0_g1_i2 |
---|---|
Name Transcript | Ll_transcript_320217 |
Sequence | CAAACATTACCACCTTTTATATGTGATCTCAAAAACCTCACTTACATTGATTTTCAATATAATTACTTTCCTGGTGAGTTCCCTAGATCACTCTACAATT GTTCCAAGCTTCAGCATCTTGATCTATCACCGAACTACTTTGTTGGTAAGATTCCTGATGATATTGACAACTTGGCTAACTTGAGTTTTCTTAGCCTTGG TGCCAACAACTTTTCTGGTGATATTCCAGTGAGTATAGGGAAGTTGAAGAAGCTGACAAATCTTCAACTTTATCAGTGTAGTTTTAATGGTACTATACCT GATGAAATTGGTAATTTGTCCAATCTTGAAACCTTGTTTTTGTTCTCCAGCAGCATGCTTCCTCCTACAAAGTTGCCATCAAGTTTCACCAAGTTGAACA AATTGAGGGTCTTTGATATGCATGACTCCAACTTGGTTGGTGAAATACCTGAAACTATTGGAGAAATGGTTGCATTGGAGAATTTGGATTTATCAGGAAA TGGTTTAAGTGGAAAAATTCCCAATGGTTTGTTGAAGCTAAGGAATCTGAGCATAGTTTATCTTTACAAAAACAGCTTATCTGGGGAGATACCTGTAGTG GTTGAATCATTCAACTTAATAGAATTGGATCTTTCACAGAATAATCTCAGTGGGAAAATACCACAAGATTTTGGAAAGCTTAAAAAGTTAACAACTATGA ATTTGCAAATCAATCAATTATCAGGTGAGGTACCAGAGAGCATTGGTTTTCTGCCAAATCTGGTAGATTTTCTTGTATTTCTGAACAACTTATCAGGTAA TCTTCCTCCGAACTTCGGCCGGTTCTCAAAGCTTGAAACATTTCAGATTGCATCTAATAGTTTCACTGGAAGGCTTCCAGAGAACTTATGCTACAATGGG AAGTTTGTTGGTTTAACTACCTATGACAATAACCTTAATGGCGAGTTGCCGGAAACACTAGGAAATTGTAGTAGCCTGCAATTTCTGAGAATTGAAAACA ATAAGTTTTCTGGCAACATTCCTCGTGGCCTTTGGACATTAGAGAATGTTACAACCATTAGGGTAAATCAGAACAAATTCACTGGTGAGCTTCCTGAAAG AATTTCTTCAAGTATTTCAGATTTGGGCATAAGTAACAATCATTTTTTTGGTAAACTTCCAAGTGAAATGTCTTCATGGAAGAATTTGGTGATGTTTAAT GCAAGTAACAACTTCTTTAATGGAAGTATTCCACATGATCTAACATCTCTTCCACAGTTAACAACTCTTTTGCTTGATCAGAACCAGCTCACAGGACCAC TTCCATCAGATATAATATCATGGAAGTCCCTAACAGCTCTAAATTTCAGCCACAACCAACTATCTGGAGAGATACCGGATTCAATTGGTCGGTTACCTGC CCTTAATATATTGGACTTGTCAGAAAACAAAATTTCTGGCCAAATTCCACCCCTTAGGAGACCAACCAATCTCAATCTATCTTCCAATCAATTAACTGGA AGGATTCCTAGTGATTTTGAAAACCTTGCATATTCCAGGAGCTTTCTGAACAATTCTGGTCTCTGTGCTGATACCACAGTACTGAACCTAACCTTGTGCA GTTCTGCTCCTCAAAGGGTAAATAATGGGTCATCTGTGTCTCAATCTCATGCTTTGTTAATAACTGTGGTGGTATTGGCCTCCTTAGTGGCTTTCTTGTC ATCACTCTTTGTGATCAGATTTTACAGAAAAAGAAAGCAAGAGTTGTCTAAGTCATGGAAGCTCACTTCATTCCAGAGGCTGAGTTTCACAAAATCAAGC ATTGTGTCATCGATGAGCGAACATAATATCATTGGCAGTGGTGGATATGGTGAAGTATACCGTGTTGCTGTCGATGGTTTAGGCGAATATGTTGCTGTGA AAAAGATATCCCGTAGCAGAAGGTTGGATCCGAAGCTTGAAGATTCATTTCTTGCAGAAGTTGAAATACTCAGCAATATTAGGCACAACAACATTGTCAA GTTACTATGCTGTATCTCAAGTGAGGATAGTTTGCTCCTTGTTTATGAGTATCATGAAAACCATAGCCTTGATAGGTGGCTGCACAATAAGAATAAGTCA TCATCAACTGTGTCAGCTTTAGTAGTCCATTATAGTGTCCTTGATTGGCCAAGAAGATTGCATATAGCCATTGGAGCTGCCCAAGGTTTGTGCTACATGC ACCATGATTGCTCACCACTGGTTATTCATCGAGATGTGAAACAAGTAACATTCTGTTGGATTCTGAATTCAATGCAAAAGTTGCTGATTTTGGTCTGGCC AGAATGTTGATCAAGCCAGAAGAACTTGCTACCATGTCAGCTGTAGCAGGCACATTTGGCTATATTGCTCCAGAATATGCTCAAACAACAAGAGTGAACG AGAAGATAGATGTATATAGCTTTGGAGTTGTACTACTAGAACTAACAACAGGTAAAGAAGCAAACCACGGAGATGAATACTCATCCCTTGCAGAATGGGC ATGGCGCTACGTTGAAGTAGAAAGCAACATAGAAGATGTTCTTGATGAAGAAATTAAGGAAGCTTGTTACATTGATCAAATGTGCAGAATCTTCAAACTT GGGGTCATGTGTACCGCAACATTACCAGCTAGTAGACCTTCCATGAAAGAGGTTCTGAAAATATTGCAAAGTGGCAATGATCCATTTGCAAATGGTGAGA AGAATATTGATTTCTATGAGGTTGCTCCACTTCTAAAGAGATAGTTTCTTTTCGAGTTTTCTTTCTTAGGTTCAAACAAGAAAAGGCTTATGGTGTATAC TTATGCACCCAGAGACAAGGAAGGGCATAATAAGCTACAAAATGTTTCGGGGAGTTGAAAATAAGGGTAGATTTAGAAATTCCTGAATAGGTTAACTTTT CGAATTTCAGAAATTCCCGAATAGGTTAAGTTTTCAAATTGCACAAAGATCATCTCGAATAGAAGAATGAAAGTTATTATTTTTGTTTTAAGTAGTAAAT AAAATAATAAAAATGTTATAATATTTTCT BLAST |
Tissue | pods |
Gene name | LI_gene_143150; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_320217
Blastp | LRR receptor-like serine/threonine-protein kinase HSL2 from Arabidopsis with 39.53% of identity |
---|---|
Blastx | Receptor-like protein kinase HSL1 from Arabidopsis with 38.22% of identity |
Eggnog | Serine Threonine protein kinase(COG0515) |
Kegg | Link to kegg annotations (AT5G65710) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019448352.1) |
Pfam | Leucine Rich Repeat (PF00560.32) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |