Ll_transcript_320218

• Id Trinity: TRINITY_DN46237_c0_g1_i3
• Name Transcript: Ll_transcript_320218
• Sequence: GCAAAGTGCAATACAACTCCAAGGTTGAAAGCAAAGCCATTTATTACTCAAATCTTCCACACAAATTCAGTGTGCAAAATGAGTTGCCAACAAGAAAAGT CACTGAAATAGTGAATATCATACCTTAGCTCCTCTTTGAGTAGCAAAACACTGTGTGAACCAGAAACAGCATAGTCAACCAGATGACAAAGGTTGTTCCA TCATGTCTCAAAATGACACCTTTTTATCTTCTCTTCTTCCTCTTCTTCATCTATGTAAACTCACAGTCTCAGTCACTGCTCTATCATCAAGAACATGCAG TCCTATTGAGGATAAAACAATACCTTAAGAACCCTCCATTCCTTAGTCACTGGACCTCATCAAACTCTTCACATTGTTCATGGCCAGAGATCAAATGCAC CAATGGCTCAGTCACTACACTGGCCTTGATTAATACCAACATCACTCAAACATTACCACCTTTCATATGTAACCTCAAAAACCTCACATACATTGATTTT CAGTTGAATTATATTCCTGGTGAGTTCCCTAGATCTCTCTATAACTGTCCTAAGCTTGAGCATCTTGATCTCTCACAGAACTACTTTGTTGGTAAGATTC CTGATGATATTGACAACTTGGCTAACTTGAGTTTTCTTAGCCTTGGTGCCAACAACTTTTCTGGTGATATTCCAGTGAGTATAGGGAAGTTGAAGAAGCT GACAAATCTTCAACTTTATCAGTGTAGTTTTAATGGTACTATACCTGATGAAATTGGTAATTTGTCCAATCTTGAAACCTTGTTTTTGTTCTCCAGCAGC ATGCTTCCTCCTACAAAGTTGCCATCAAGTTTCACCAAGTTGAACAAATTGAGGGTCTTTGATATGCATGACTCCAACTTGGTTGGTGAAATACCTGAAA CTATTGGAGAAATGGTTGCATTGGAGAATTTGGATTTATCAGGAAATGGTTTAAGTGGAAAAATTCCCAATGGTTTGTTGAAGCTAAGGAATCTGAGCAT AGTTTATCTTTACAAAAACAGCTTATCTGGGGAGATACCTGTAGTGGTTGAATCATTCAACTTAATAGAATTGGATCTTTCACAGAATAATCTCAGTGGG AAAATACCACAAGATTTTGGAAAGCTTAAAAAGTTAACAACTATGAATTTGCAAATCAATCAATTATCAGGTGAGGTACCAGAGAGCATTGGTTTTCTGC CAAATCTGGTAGATTTTCTTGTATTTCTGAACAACTTATCAGGTAATCTTCCTCCGAACTTCGGCCGGTTCTCAAAGCTTGAAACATTTCAGATTGCATC TAATAGTTTCACTGGAAGGCTTCCAGAGAACTTATGCTACAATGGGAAGTTTGTTGGTTTAACTACCTATGACAATAACCTTAATGGCGAGTTGCCGGAA ACACTAGGAAATTGTAGTAGCCTGCAATTTCTGAGAATTGAAAACAATAAGTTTTCTGGCAACATTCCTCGTGGCCTTTGGACATTAGAGAATGTTACAA CCATTAGGGTAAATCAGAACAAATTCACTGGTGAGCTTCCTGAAAGAATTTCTTCAAGTATTTCAGATTTGGGCATAAGTAACAATCATTTTTTTGGTAA ACTTCCAAGTGAAATGTCTTCATGGAAGAATTTGGTGATGTTTAATGCAAGTAACAACTTCTTTAATGGAAGTATTCCACATGATCTAACATCTCTTCCA CAGTTAACAACTCTTTTGCTTGATCAGAACCAGCTCACAGGACCACTTCCATCAGATATAATATCATGGAAGTCCCTAACAGCTCTAAATTTCAGCCACA ACCAACTATCTGGAGAGATACCGGATTCAATTGGTCGGTTACCTGCCCTTAATATATTGGACTTGTCAGAAAACAAAATTTCTGGCCAAATTCCACCCCT TAGGAGACCAACCAATCTCAATCTATCTTCCAATCAATTAACTGGAAGGATTCCTAGTGATTTTGAAAACCTTGCATATTCCAGGAGCTTTCTGAACAAT TCTGGTCTCTGTGCTGATACCACAGTACTGAACCTAACCTTGTGCAGTTCTGCTCCTCAAAGGGTAAATAATGGGTCATCTGTGTCTCAATCTCATGCTT TGTTAATAACTGTGGTGGTATTGGCCTCCTTAGTGGCTTTCTTGTCATCACTCTTTGTGATCAGATTTTACAGAAAAAGAAAGCAAGAGTTGTCTAAGTC ATGGAAGCTCACTTCATTCCAGAGGCTGAGTTTCACAAAATCAAGCATTGTGTCATCGATGAGCGAACATAATATCATTGGCAGTGGTGGATATGGTGAA GTATACCGTGTTGCTGTCGATGGTTTAGGCGAATATGTTGCTGTGAAAAAGATATCCCGTAGCAGAAGGTTGGATCCGAAGCTTGAAGATTCATTTCTTG CAGAAGTTGAAATACTCAGCAATATTAGGCACAACAACATTGTCAAGTTACTATGCTGTATCTCAAGTGAGGATAGTTTGCTCCTTGTTTATGAGTATCA TGAAAACCATAGCCTTGATAGGTGGCTGCACAATAAGAATAAGTCATCATCAACTGTGTCAGCTTTAGTAGTCCATTATAGTGTCCTTGATTGGCCAAGA AGATTGCATATAGCCATTGGAGCTGCCCAAGGTTTGTGCTACATGCACCATGATTGCTCACCACTGGTTATTCATCGAGATGTGAAAACAAGTAACATTC TGTTGGATTCTGAATTCAATGCAAAAGTTGCTGATTTTGGTCTGGCCAGAATGTTGATCAAGCCAGAAGAACTTGCTACCATGTCAGCTGTAGCAGGCAC ATTTGGCTATATTGCTCCAGAATATGCTCAAACAACAAGAGTGAACGAGAAGATAGATGTATATAGCTTTGGAGTTGTACTACTAGAACTAACAACAGGT AAAGAAGCAAACCACGGAGATGAATACTCATCCCTTGCAGAATGGGCATGGCGCTACGTTGAAGTAGAAAGCAACATAGAAGATGTTCTTGATGAAGAAA TTAAGGAAGCTTGTTACATTGATCAAATGTGCAGAATCTTCAAACTTGGGGTCATGTGTACCGCAACATTACCAGCTAGTAGACCTTCCATGAAAGAGGT TCTGAAAATATTGCAAAGTGGCAATGATCCATTTGCAAATGGTGAGAAGAATATTGATTTCTATGAGGTTGCTCCACTTCTAAAGAGATAGTTTCTTTTC GAGTTTTCTTTCTTAGGTTCAAACAAGAAAAGGCTTATGGTGTATACTTATGCACCCAGAGACAAGGAAGGGCATAATAAGCTACAAAATGTTTCGGGGA GTTGAAAATAAGGGTAGATTTAGAAATTCCTGAATAGGTTAACTTTTCGAATTTCAGAAATTCCCGAATAGGTTAAGTTTTCAAATTGCACAAAGATCAT CTCGAATAGAAGAATGAAAGTTATTATTTTTGTTTTAAGTAGTAAATAAAATAATAAAAATGTTATAATATTTTCT
• Tissue: pods
• Gene name: LI_gene_143150;
• Additional information: details;

Expression of Ll_transcript_320218

FPKM

• PAB: 0.3
• PNAB: 5.2
• PS1: 11.2
• PS2: 0.8
• PS3: 2.3
• PW1: 3.7
• PW2: 4.6
• PW3: 0.7

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_320218

• Blastp: Receptor-like protein kinase HSL1 from Arabidopsis with 37.54% of identity
• Blastx: Receptor-like protein kinase HSL1 from Arabidopsis with 36.66% of identity
• Eggnog: leucine Rich Repeat(COG4886)
• Kegg: Link to kegg annotations (AT1G28440)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019448352.1)
• Pfam: Leucine rich repeat N-terminal domain (PF08263.11)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;