Id Trinity | TRINITY_DN46241_c0_g1_i7 |
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Name Transcript | Ll_transcript_320414 |
Sequence | CAAGTTTGGATGGCATTCACCCTTCTTGTCCTCCGTCACTCCACCACCTCACTCACTAAATCATGCCGCACCATTCCCTCTTCCCTCTTCTCTTCCTCGT GCCACCGTTTCACGCCGCCACCAGAAGCGCCACCGTCTCCGAAGAAGATTCCCTTCACCGTCTCCGTTCACGGGAAGACATGGCAGGACCCTTATCACTG GATGTCCAACACCAACGACCCACATTTATTAGACCATCTCCACCGCGAAAACACTTACGCCAATGCCTTCATGGCCGATACCCTCGAAATGCAGTCAACG TTGTCTTCCGAGATGAAAAGTCGCATACCCGCTACCATTTCCACACCCCCTGAGCGTTGGGGATCCTGGACTTGGGATGAACCTTTTGTGCATTGTGGGA ATGACTCAAAATAGATAATTTAGGACTGACTGTAAATGCAAGTATGCAACTACAGAACTGTTAGTGAGGCTATATTACCAATACATCCCAGAGGGAAAGG AATTTCCAGTACTTTGCAGGAAGCTAGAAACAGGCAGAACTGGTTGGCTGAAGACTTTTCTTCATTATAAAAGAGAGGAGGTTTTGCTTGACTGGAATGA ACTTGCAGAGAAATATGGGTATGTCCATGTTGGAACATGTAGAGTTTCACCTGACCACAACTACCTTGCATATACACTTGATATTTCTGGTGGTGAAAGG TTCATGCTTCAAGTAAAAGACCTCAGAAGTGGTCTAGCAGACCCAAAATTAGAAGTTGATGATGTTGTTAGTTTAGCGTGGGCTCAAGATGCAAGTTCTC TGTTTTATACGCTATCAGATGAAAACCAGCGACCTTACAGGGTTCTCTGCAAAAAACTTGGATCTGAGTATGTGAATGATTTCCCAGTATTTACTGAAAG CGATTCCAGTTTTTGTGTGGATATAACTAGCACAAAAGATGGCAAGTTCATAACTGTGAATTCAAACTCAAGGACTTCATCTGAGGAAGGAACTTATATA TCTTCTTTTACAAATTTATAATGAGATTACTCTGTGGTAGTAATATGTTTATCTTGATGCTTATTACAGGTTTATATTATAGATTCGGCCAATCCAATGG ATGGTTTACAAAGAATTTGTAAACGTACTTCTGGTGTACAGTATTTTGTGGAACATCACTCTGGTTTATTTTATATCCTTACCAATGCTCCTATTCCTGA TGGTCAATGGTTTGGTGAAGATTATTACCTGGTTAGATGCCGAGTTGAAGATATACAGTCAGCTAAGTGGGAGACTACCATACTTCCTGATAACAATATG AGCATATGTGATATGGACATTTTTAATGGACATCTAGTTCTTTCCCTAAAAAAGAAAGGTCTTCCTTTGTTATGTTCTGTGGACATCCTGATCCAAATTG ATTTAAAGCATCAAATATATATTCAAGACCTGAAACCATGGTACTTTCCTATGCCATCAAATGCATGCAGTGTTGTTCCTGGTTCAAATCACGACTTCCT CAATGATGTTTACCGTGTGGTGCTTTCATCACCTGTGATGCCGGATGTAATTGTTGACTATGACATGTCCAGACAGACATACTCAATTGTGCATCAAGAG GAAGTGATTTGTGATTCTGTCAGGCAGTCATGTACTCAAAGCTTTCAGCTAAGTACGATTGAAGCTCAAGAGTTACCCATTGATAAGAAAGAGTGCCCCA GAAATTCTGGTTCACAGATATGGAATGAATTTTCTGAAGTATTCTGTTGTCAGAGGGAGGAAGTTATTTCCCATGATGGTGTAAGGGTTCCACTGACCAT TGTGTACTCTAGAGAATCCTGGCGGAAGGGTCTATCCCCAGGACTTTTAGTAGGCTATGGAGCTTATGGTGAAGATTTGGATAAGAGCTGGTGTTCAGAG CGCCTGAGTTTACTGGAACGTGGCTGGGTAGTTGCTTTTGCTGATGTAAGAGGTGGTGGTCTAGGTGATTCTTCATGGCATAAATCTGGTAGTGGGTTAA ACAAACACAACTCAATAATTGACTTTGTATCTTGTGGCAATTATCTGGTTAATGAGGGCTATGTTCAGAGTGACCAGCTTGGTGCTATTGGATGGAGTGC AGGCTGCTTTCTTATTGGTGCAGCTATAAATATGTCTCCACGACTCTTTCGTGCTGCCATATTAAAGGTGCCATTTCTTGATGTATGCAACACATTGCTG GATCCCAGTCTGCCTCTCACACTTTTAGATTATGAAGAATTTGGAAATCCTCAGATAAAATCAAATTTTGATTCGATTTTCAGTTGTTCTCCTTATGACA ACGTTCCTCCGGGCAGTTGCTTTCCTTCAGTTCTGGTTACAGCAGCAGTTAACGATTCAAGGGTTGGAGTTTGGGAAGGCGCAAAGTGGGTGGCTAAAGT ACGAGATAGTACCTGCTCTAATTGTTCTCGTGCGGTCATCATGAAAACAAGTATGATAGGCGGGCATTTTGGTGAAGGTGGTCACTATGGCCAATGTGAT GAAACAGCTTATGAGTATGCTTTCCTTATGAAAGCTTTCGGGATTTCGAAAGAATAAGTACATTTATGAGAATAGCTGTTGGAAAGTTATCTTGTATAAG TGGAAAATTATCATCTGGGTAAAGCAAAAGTTGAATTATTTCTATCATTCTGCTGCACTGTCAATATGAGGCTTCATAGATGCATATAACATTCAGCTTC TCTACTTAGGCTTCACCGAGCTCAGGAGCATTGTTCTTTCAAGCTGGATTAGCTGCACTCTTTACAGAGAGGCAATTAGATGTGATCAGAGTTGCAGCGC ATCCTCCTACGATATTAAGAGATTTCGTAACTAACTGGGAAAATCAAAGTTTGATTTGAAGTTTTAAACTTATTATGCAGAAAATAACAATTTGTTACAC ATTCTGCAGAATCTTCCTGCCATAAATGAGTCGCTGCGGTACTTGGGAGAAGAAAACTAACTACAGTTTGTAATTTAGTTTGTTAGCTGGTTGATTTTGA TGCCAGAAACAGTGAAACAAAGAGTGAAGTCTGAAAGTGCATGCAAAGCTCCCAGTTTTACTTTAGCAAGGATTATTTTGTACTCACCTTCTTCTTTTCC TCATCTTTTTGTTGTTTCTGAAATTTTGTAAGCACTTTTCTAGCTGCTATTGTTATATATAGGTCTGGAAACGAATAGAATCGAGTCGAACTAGAGTTCA GTTCGGTTCAGCTTGATAAGGATTGGTTCGGCTCGAAGCTCGACCTGAGTTCGAGACAAGTAATTTTTTTAGCTCGAGTTCGGTTAAGTTAAAATTTGCG AACTGTTCGGTTCAGTTCGAATTGGTTCACTTGTACAACTTAACTAATTAATTAATTTTTTAAAAATACTACACATTTTTT BLAST |
Tissue | pods |
Gene name | LI_gene_143158; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_320414
Blastp | Protease 2 from Escherichia with 32.14% of identity |
---|---|
Blastx | Protease 2 from Moraxella with 29.99% of identity |
Eggnog | Oligopeptidase b(COG1770) |
Kegg | Link to kegg annotations (JW1834) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019462190.1) |
Pfam | Prolyl oligopeptidase, N-terminal beta-propeller domain (PF02897.14) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |