Ll_transcript_319389

• Id Trinity: TRINITY_DN46247_c2_g6_i1
• Name Transcript: Ll_transcript_319389
• Sequence: GGACACAATACCCTTATTAACGACACCAACCCTACACAACAACAACAACAACAAGAAGAAGAAGAAGAAGAAAGGGATAATAGAGAAAGGGATCAACTTT CGTTTCTAACCCTATTTATTGATACGTTTAAGAAATCTGTAATTGGTACTTGTACTAACACTGATTTCTCTTCTTCTTCTTCTTCTTCAATGGAAATTGG TTGGCCTTCTAATGTTAGACATGTTGCGCATGTTACTTTTCATCGATTCCATGGTTTTCTTGGTTTGCCTCTTGAATTTCAACCTCAATTACCTCCTACA CCTCCTAGCGCAAGCGCAAGTGTTTTCGGGGTTTCAACAGAGTCTATGCAGCTTTCTTTTGATGCCAGAGGGAATAGCATACCTACAATATTGCTGTTAA TGCAAAGACATTTATATACACAAGGAGGTCTGCAGGCCGAAGGAATCTTCCGAATTAATGCGGAAAATGGTCAAGAGGAGTTTGTGAGGGAACAATTAAA CAGAGGAGTAGTACCAGATGGCACAGACGTGCACTGCTTGGCAGGTCTTATAAAGGCTTGGTTCAGAGAACTTCCAACTGGGGTATTGGACCCTCTTTCA CCGGAACAGGTGATGCAGTCCCAATCAGAAGAAGAATGTGCTCAGCTTGTGAGGCTTCTTCCTCCGACTGAAGCTGCTCTGTTAGATTGGGCAATAAACC TGATGGCTGATGTCGCTCAACTGGAACATTTGAACAAAATGAATGCACGCAATGTTGCAATGGTCTTTGCTCCAAACATGACTCACGTAAGTCAAAATCA TGTTCTTATCTATATTTAGAACGTGTTTCTTCTCATAGCCCTTTTTTGTGCTTGAATTTATACAAGCCAACTTCATCTAAGTGAATATAACTTCATTATG TTTTTATAACTTCAAAGGATGGATTTTGTTGATGCGTGTATAGATAAAAGATGAAAAATAAGTGAGAGATAGAGATAATTTGATTGGTTGAAAGGTTGCA AATCTGAGATGTACAAATAACATTACTGATATATATTAGTTATTCTTCTTCAGTGCAGAAAATTCGGTGGTTTCTTGCTATTCTAAAACTATGTTTGCTT TATTTTCTTCCTTTAACGTTGTTTATATTGTGTTTTGTAAATTTGTTGTATTTGTCTGAGGTCATGTTTTAAATATGCTGCAAGACAGCATTTCTGACAT TATCTATTACAGATGGTGGATCCTTTGACTGCTTTGATGTATGCCGTACAAGTCATGAATTTTCTCAAGACTCTTGTCGAGAAGGCGCTGAGAGAAAGAG AAGAATCTATGGGAAAATCAGGTCTCATTTCAAACCTAAGTTCTTTTGATGACGATGGGCACCATAGCTCTTCAGAATGGATTCTCAAGGATGACAGTGA AAATGAAAGTGATAGCAGTGAAGAGGATACATCATTTGTTACTGAAGAACCTTCTCAACAAAGCCCTATTCATGTTATTGAAGATGGCTACGAAACTGAA AGTGGATCGAAAAATCTCTCAATTTCTGAAAAACAATTTCCTGGAGAAAATAGGTTGCTGGTGCACAGTTGTCCTTGCAATGTTGTCTCTCAACTTACTA GCAGTCTGGCTAAGGAGAATCAAGCAAATATTTGCAAGAGCAAAAGTCTTCAGTTAAGTACTTATAATATGGTCAAGTGTTCCAAAAAGTTGATTGAGCT TTCCGTAGCAGGACCTGCGGAGAAGAGCATGGGATCTGCAATTATTGGGCGTATAAATTCAAGATCAGAGTTAACGGAAGCATGGCGTTGAAAAGCATCT GATTTTTTATCTCGAGGATGGGATGACAGAAAGATAGTACTTCCATAGCAAGTTGTCGAAGCACTCACACAAGGCCCCTAGGGCGAAGGAGTGGATGGTT TAACATGTAAAGAGGTTCCATGGTTCCAAGTTTGCATAGGCTTAATACCGATTTCATGTGTGTTTTAATTTTAGTTTGTTATTGTTCCTGTATCAGTTTC TTAACATGTTTCCTTCATTCTATTCCATTGATCATGCAGAGTGCTACCACTTTTTCTGAAGTATAGACTTTAACGAACTCAGTTATTAAATTCTCATGTT TGTTCCATCACATTTTGAGTGTTAAAGACTGCATGGTCTTTACCATGAAGTCATGCTTAT
• Tissue: pods
• Gene name: LI_gene_143200;
• Additional information: details;

Expression of Ll_transcript_319389

FPKM

• PAB: 0
• PNAB: 0.4
• PS1: 0
• PS2: 0.2
• PS3: 0.2
• PW1: 0.2
• PW2: 0
• PW3: 0.2

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_319389

• Blastp: Rho GTPase-activating protein 1 from Arabidopsis with 72.41% of identity
• Blastx: Rho GTPase-activating protein 1 from Arabidopsis with 72.41% of identity
• Eggnog: rho GTPase activating protein(ENOG410XRR2)
• Kegg: Link to kegg annotations (AT5G22400)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019425485.1)
• Pfam: RhoGAP domain (PF00620.26)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;