Ll_transcript_319392

• Id Trinity: TRINITY_DN46247_c2_g6_i2
• Name Transcript: Ll_transcript_319392
• Sequence: GGACACAATACCCTTATTAACGACACCAACCCTACACAACAACAACAACAACAAGAAGAAGAAGAAGAAGAAAGGGATAATAGAGAAAGGGATCAACTTT CGTTTCTAACCCTATTTATTGATACGTTTAAGAAATCTGTAATTGGTACTTGTACTAACACTGATTTCTCTTCTTCTTCTTCTTCTTCAATGGAAATTGG TTGGCCTTCTAATGTTAGACATGTTGCGCATGTTACTTTTCATCGATTCCATGGTTTTCTTGGTTTGCCTCTTGAATTTCAACCTCAATTACCTCCTACA CCTCCTAGCGCAAGCGCAAGTGTTTTCGGGGTTTCAACAGAGTCTATGCAGCTTTCTTTTGATGCCAGAGGGAATAGCATACCTACAATATTGCTGTTAA TGCAAAGACATTTATATACACAAGGAGGTCTGCAGGCCGAAGGAATCTTCCGAATTAATGCGGAAAATGGTCAAGAGGAGTTTGTGAGGGAACAATTAAA CAGAGGAGTAGTACCAGATGGCACAGACGTGCACTGCTTGGCAGGTCTTATAAAGGCTTGGTTCAGAGAACTTCCAACTGGGGTATTGGACCCTCTTTCA CCGGAACAGGTGATGCAGTCCCAATCAGAAGAAGAATGTGCTCAGCTTGTGAGGCTTCTTCCTCCGACTGAAGCTGCTCTGTTAGATTGGGCAATAAACC TGATGGCTGATGTCGCTCAACTGGAACATTTGAACAAAATGAATGCACGCAATGTTGCAATGGTCTTTGCTCCAAACATGACTCACATGGTGGATCCTTT GACTGCTTTGATGTATGCCGTACAAGTCATGAATTTTCTCAAGACTCTTGTCGAGAAGGCGCTGAGAGAAAGAGAAGAATCTATGGGAAAATCAGGTCTC ATTTCAAACCTAAGTTCTTTTGATGACGATGGGCACCATAGCTCTTCAGAATGGATTCTCAAGGATGACAGTGAAAATGAAAGTGATAGCAGTGAAGAGG ATACATCATTTGTTACTGAAGAACCTTCTCAACAAAGCCCTATTCATGTTATTGAAGATGGCTACGAAACTGAAAGTGGATCGAAAAATCTCTCAATTTC TGAAAAACAATTTCCTGGAGAAAATAGGTTGCTGGTGCACAGTTGTCCTTGCAATGTTGTCTCTCAACTTACTAGCAGTCTGGCTAAGGAGAATCAAGCA AATATTTGCAAGAGCAAAAGTCTTCAGTTAAGTACTTATAATATGGTCAAGTGTTCCAAAAAGTTGATTGAGCTTTCCGTAGCAGGACCTGCGGAGAAGA GCATGGGATCTGCAATTATTGGGCGTATAAATTCAAGATCAGAGTTAACGGAAGCATGGCGTTGAAAAGCATCTGATTTTTTATCTCGAGGATGGGATGA CAGAAAGATAGTACTTCCATAGCAAGTTGTCGAAGCACTCACACAAGGCCCCTAGGGCGAAGGAGTGGATGGTTTAACATGTAAAGAGGTTCCATGGTTC CAAGTTTGCATAGGCTTAATACCGATTTCATGTGTGTTTTAATTTTAGTTTGTTATTGTTCCTGTATCAGTTTCTTAACATGTTTCCTTCATTCTATTCC ATTGATCATGCAGAGTGCTACCACTTTTTCTGAAGTATAGACTTTAACGAACTCAGTTATTAAATTCTCATGTTTGTTCCATCACATTTTGAGTGTTAAA GACTGCATGGTCTTTACCATGAAGTCATGCTTAT
• Tissue: pods
• Gene name: LI_gene_143200;
• Additional information: details;

Expression of Ll_transcript_319392

FPKM

• PAB: 12.7
• PNAB: 22.8
• PS1: 9.2
• PS2: 7.3
• PS3: 9.2
• PW1: 29.7
• PW2: 28.1
• PW3: 15

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_319392

• Blastp: Rho GTPase-activating protein 1 from Arabidopsis with 55.92% of identity
• Blastx: Rho GTPase-activating protein 1 from Arabidopsis with 52.68% of identity
• Eggnog: rho GTPase activating protein(ENOG410XRR2)
• Kegg: Link to kegg annotations (AT5G22400)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019425485.1)
• Pfam: RhoGAP domain (PF00620.26)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;