Ll_transcript_320488

• Id Trinity: TRINITY_DN46248_c5_g2_i6
• Name Transcript: Ll_transcript_320488
• Sequence: GATAAATATTAAATTATCGATGTGGTAATGAAAGCTTTTGTATTTTTGACATAATCTCTTCCACCTTCGTCATAATTCTACTCGTTCTCATTATCATCAA TGGCTCCCAAAAGGGTTCTTCTTCTTTGCGGTGATTTCATGGAAGACTATGAAGTACGTTCATTTCACTCACTTCCTTTTCTCATTCGTTCTCACTAATA AGATCTCCATCCTTTTGTGTTGCAGGTCATGGTTCCATTTCAAGCATTGCAAGCTTATGGTCTCACCGTCGACGCCGTTTGCCCCGGAAAGAAAGCCGGC GATGTTTGCCGCACCGCCGTACATCAACTTTCCGGTCATCAGGTCTCTGTTATATTCACACAGCCTTGGTTTTTCTTTTTCTTTATGGGTTTCGTTTTTG TTAAATTCTGTTCTAATTATTCATATATGTATTTGATTTCATCTGATTTTATGTGTAATTCAATTCACACTATTGGAAGTAAAAGCTTATATAAATAAAC AAGGTTTAAGTTGTTTTGCAAATCAGTTTTTATTTTTGGAAAATTTTGTGGGTGAATTTAATTAATTAATTTTGATATTTTTACTTTATTAGTCTCACTT TAACAATTAACATCGTTGAATGTCTGCTCTTGCTTTACTTTATTCAGGACCTGTGAAAGAAAACATGTTTGGTTCATCATTTTCATTTCTGATTTTTGGA AATGAAGTTCACGTTTTCTAAAATTCTGAGTCAAACAAAACATCATTCCACAGTTTTCAGCAATCACACAGTACAATTTTTGCTATTTTAACCAGTTACC CTCTTCTTTCTTATTTAATTTTTTTACAAATAGAGAAAAATGAAGATCAACCACAAATAGAGAGGTTTGATACTGAAAATAGAAAACAGAATTGATATAT CAGGCATATGTTTTCTAAAGGATAAGAAATAGGCAAATAATTTTCAACAGCGGCGGCAGAAAGTATTTTCTGAAACCAAAAACACCCTACATTGTCATTT CAAATAATTAACATTAAAAAACAAATTAAATTGGCTCATATACTGAACAAAGTTTTTAGTGCATTTTCAAGATATAAGCAGTTGTTATTCTATAATCCTA GAAACTGTAACAAATAACATTTAGTCTAATCAATTCCCAAAATGGTTCTAAACATATTCTTAGCAAGCATTGTATGCTGAGGTTTTAATTTTGTTTTAGA GTAATGCATTTTTTGGCTGATTTCAGACTTATTCTGAGACACGTGGTCACAATTTTGAGCTGAATGCAACTTTTGATGATGTTGATGCGACGAGCTATGA TGGGTTGGTGTTACCTGGCGGAAGGGCACCAGAGTATCTTGCTCATATTCCTGGTGTTGTTGAACTGGTGACCAAGTTTGCCACTTCTGGAAAAGCACTT GCTTCCATTTGTCATGGACAGTTGATTCTGGCTGCTGCAGGAGTAGTTAAAGGTCGTAAGTGCACGGCTTTTCCCGCTGTTAGACCGGCACTGGTTGCTT CTGGTGCTCACTGGGTTGAACCTGATACTAATTCAGCAACAGTGGTGGATGGTAATCTCATTACTGCAGCTACTTATGAAGGGCACCCAGAGTTTATTCG GCATTTTGTGAAGGCATTAGGAGGGAACATAAGTGGCTCTGATAAAAAAATCCTCTTTCTTTGCGGGGATTACATGGAGGATTATGAGGTGACGGTTCCT TTTCAGTCTCTTCAGGCTTTAGGGTGCCATGTTGATGCAGTTTGCCCCAAAAAGAAGGCTGGTGAGACTTGCCCAACTGCCATTCATGATTTTGAAGGAG ATCAAACTTATAGTGAGAAGCCCGGGCATGATTTTGCTTTAACTGCTACCTATAGTGATGTGGATGTATCAAGCTACGATGCTCTTGTCATCCCTGGTGG TAGAGCACCTGAGTACTTGGCTTTGGATGAGTCTGTTATTGCTTTGGTGAAGCATTTCATTGAAAGCAAGAAGCCAGTTGCATCTATCTGCCATGGTCAA CAGATTTTAGCTGCTGCTGATGTTCTGAAGGGAAGGAAATGTACTGCTTTTCCAGCCGTGAAGCTTAATGTGGTTCTAGCAGGAGCAACATGGCTGGAGC CTGACCCTATAAGCCGTTGCTTCACCGATGGAAATCTGGTCACTGGAGCTGCATGGCCAGGGCACCCTGAGTTCATTTCTCAGTTGATGGTACTACTTGG TATTAAAGTATCTTTCTAGCCACACTTTGTATCGTAATGAATGAAACTTGGTATATGTGTCTTTTATCAAAGTATGTATGTAGATGTGTATTACAATTCT TTATGTGAGTTGTAATGTACAAGGCTAGAGATAGATAAACATTTCTGAATAAAAGTCTATCTTTGTAGATAGACATTTATTTCTTTGAGCTAAAACTCTT TTGGTGGTTAATGTGCACATTTCCCCCCATGTTATTCCCTTGACAGTTCAATTCAATTCTTCCCTTCTGTGAATTCACTTTTTATACTACAGATGTCAGG CTCCATAAAAGAAAGCAGTTTTTTTAATTTGTTGGTAAAAATGTAGTGTAAATATATTAATGTTATAGTCAAGGTG
• Tissue: pods
• Gene name: LI_gene_143213;
• Additional information: details;

Expression of Ll_transcript_320488

FPKM

• PAB: 0.2
• PNAB: 0.3
• PS1: 0.2
• PS2: 0.2
• PS3: 0.6
• PW1: 0.5
• PW2: 0
• PW3: 0

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_320488

• Blastp: Protein DJ-1 homolog D from Arabidopsis with 83.43% of identity
• Blastx: Protein DJ-1 homolog D from Arabidopsis with 78.55% of identity
• Eggnog: PfpI family(COG0693)
• Kegg: Link to kegg annotations (AT3G02720)
• CantataDB: Link to cantataDB annotations (CNT0001920)
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019439532.1)
• Pfam: DJ-1/PfpI family (PF01965.23)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;