Ll_transcript_319790

• Id Trinity: TRINITY_DN46258_c3_g10_i1
• Name Transcript: Ll_transcript_319790
• Sequence: GCAAGACAACAAACATTCTTTTTCTTGAGAGAGAGAGAGAGAGAGAGAAAATGGATGTTGAAGGAAATAGAGGAAAGGTGGGATATGATATTGAAGAAGA GAAGACAGTAGATTGGAGAGGTAGACCCTCCAATTTTCATAAGCATGGTGGAATGAAAGCTGCTACTTTTATTCTTGGGATTCAAGCATTTGAAATAATG GCAATAGCAGCAGTGGGAAACAATCTGATAACATATGTGATAAATGAATTGCACTTCTCTTTGTCTGAGTCTGCAAACATAGTCACTAACTTTGTTGGAA CTATTTTTATACTTGCACTCCTTGGTGGCTATCTATCCGACTCTTTCCTTGGCAGCTTTTGGACTATCCTAATCTTCGGCTTTCTCGAACTTTGTGGTTT GATTTTGCTGTCAGTGCATGCTCATATTCCTCAATTGAAGCCACCACCATGCAACATGTTAACAGATGGAGAAAATTGCATAAAAGCAAAAGGGTTCAAA GCCATGGTTTTCTTCTTAGCAATATACTTAGTAGCATTAGGAAGTGGGTCTTTGAAGCCTAACATGCTTGCTTATGGAGCTGACCAAATCAACAAAAACC AATCAAAGAAACTCTCAACATATTTCAATGCTGCATATTTTGCATTCTCAATGGGACAACTTATGGCTCTAACAATTCTTGTTTGGGTTCAAACTCATTC AGGAATGGATGTGGGTTTTGGAGTATCAGCAGCTGTTATGGCTATGGGATTGATAAGTGTTATATGTGGCACTTTCTATTACAAAAACAAGCCTCCACAA GGAAGCATCTTCACCCCACTAGCTCAAGTATTTGTGGCTGCTATATACAAAAGAAAGCAGGTTCTTTCTCCACAAATGCTTCATGGAGTAAGCCAAAACA ATGTTCTTCTCCAACATTCCAATAAGTTCAGGTTCTTAGACAAGGCTTGTATCAAAGTGATGGAAGAGGGGGAGGAAAGCAAATGGAGATTATGCAGTGT TGAGCAAGTTCATCAAACCAAGATAATATTATCAGTTATTCCAATATTTGGTTGCACCATTGTTTTCAACACAATCTTGGCACAACTTCAAACATTCTCA GTCCAACAAGGAAGTGCCATGAACACAGAACTCACCAAATCATTTCACATTCCTCCTGCATCCCTTCAATCCATTCCTTACATTTTGCTCATTCTATTTG TCCCTCTCTATGACAAATTCATTGTCCCTTTTATTAGAAAATTCACACACCACCCCTCAGGAATATCACCTTTGCAAAGAGTAGGAGTTGGTCTCTTTCT AGCTACATTTTCTATGGTTTCAGCTGCACTTAGTGAGAAAAAGAGAAGAGATGCAGCATTAGACCTCAACAAAACTCTCTCTATATTTTGGATTACACCA CAGTTTCTGATATTTGGATTATCAGAAATGTTTACAGCTGTTGGACTCATTGAGTTTTTCTACAAACAATCCTTAGAAGTAGGGATGCAAACATTCTTAA CAGCCATTACTTATTGTTCTTACTCTTTTGGCTTTTATTTGAGCTCAGTGTTGGTTTCTTTGGTGAATAAAATCACTGCTTCTTCTTCAAATGGTGGTTG GCTCCATGATAATGATCTCAACAAAGACAAGCTTGATCTTTTCTATTGGTTACTAGCTGCACTTAGTTTCCTCAATTTCCTTAACTATCTCTTTTGGTCA AGATGGTATTCTCACAATCCTTCAAAATCTACAATGTCTCAACCAAATGATAGCAATAATGTGAAGGAAAATAAACCCTTCGGAGAAGATGCATGACAAT ATTACATAGCAAGTTAGTATTAAGTACTGGAAAATTTTATATCCTCTTACTAATCCTCATACCAACGAGAAATACATATATCACAAAGTGATACATTATT TAATAATTAGTTTACAAGTGACATGTGTCACTTTCTTATGAGTACGTGGACTTAATTAGTGTAGAGGAAAATGTTTGGTTGATGTTGTATACATAAATAT TGAACATTAGAAAAGGGCTGCATGCATCTAATGCATCTTTTAAAGATGGCAGATATTATGTGAGCAATTATTGTGCATGCATAACAAAATGTTATATCTT ACTTCAGAAGCTTAATGTATAATCTTCAATCTTGTGTGAACTCATTTCACGCAACTTATTTAACAAATATGTTTATTCAAAA
• Tissue: pods
• Gene name: LI_gene_143326;
• Additional information: details;

Expression of Ll_transcript_319790

FPKM

• PAB: 8.6
• PNAB: 5
• PS1: 6.1
• PS2: 5.4
• PS3: 10
• PW1: 8.3
• PW2: 9.7
• PW3: 7

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_319790

• Blastp: Protein NRT1/ PTR FAMILY 4.3 from Arabidopsis with 67.46% of identity
• Blastx: Protein NRT1/ PTR FAMILY 4.3 from Arabidopsis with 68.22% of identity
• Eggnog: transporter(COG3104)
• Kegg: Link to kegg annotations (AT1G59740)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019454535.1)
• Pfam: POT family (PF00854.20)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;