| Id Trinity | TRINITY_DN46260_c2_g5_i4 |
|---|---|
| Name Transcript | Ll_transcript_320376 |
| Sequence | CGATATACAACAGAAAACGCTGAGAAAGAAAGCGACGACGTTTTTCCTGAGATCACAAAACTCGCTCCTACAAAAATCAATTTCGCGAAGAAAAACCAAA CCAAGAAAGAAAAAAAACCGTGAAGCATTTTTGCTCTGATTTTTGCAGCAATGGATGAACTATTGATTGGTGTACTCTCAATGATTATGGTTATAGCACT GATCCCACTCTATCTATGGAAACGCCGTCACGATTCTCAACCACCTCTTCACGAAGACGAACCTCAACAGGCTCCGCGGAGAGAAACGGTTGTTCGCGCC ACCGGAACTCGTCGTATGCGTCGGAGACCTGCTGCTTCTGGAGCTAGCAGTTCGTCAGCTCCAACGCAAGAAGAATCTGCCGATGAAAGTGACAATGAAG CTGGTGGTGGTGAGTACTATGAGGCTAAAGCATCAAAGAAAAAGGAACTTAAAAGGCAAGAGAGGGAGGCACGGCGACAGGCTGAAGAAGCTGCACGTGA GTCAAAGGTGGGCAAACAAGACCGTTATGCAGAGATGAGGAGGAGGAAGGAGGAAGAGCGTGAGGCACAAGAGCGTTTGTTGGAGGAGGAGGCCAAAGCT CAGAAGGCTAAGGAGGAGGAAGCTGCTGCATTAGAGTTTGATAAGTGGAAAGGTGAGTTTTCCGTTGATGATGAAGGTACCCTTGAAGAGGCGGAGGATA ATGCTGAAGATTTGGTAGCCAATTTTGTTGAATATATAAAGAAGCACAAATGCATTCCCTTAGAAGATCTTGCAGCAGAATTTAAATTACGTACACAGGA ATGTATCAATCGCATCAGTTCACTTGAAAGTATGGGTCGGCTTTCCGGTGTGATGGATGACAGGGGAAAATACATTTACATCTCACAAGAAGAAATGAAA GCTGTTGCTGATTATATTAAGCGGCAAGGGAGGGTTAGCATTTCCCACCTGGCTAGTAAATCGAACCAGTTCATTGATTTAGAGCCAAAAGATCATTACA TCGAGGACATAAGTAATGTGGGGGAGATAACTGTCAATTGACGTGGTTTTTTTATTCGGGTGGAGGAAATCATGTATATCAGAAAAAGAATGCAATATCT GGTTTTCATAGGAATTAGACTTGAATTTGAAGTTTAAATAACTTGAGTATGTAACTGGAACTAGGGTTTTAGTATGGGACTTGAATTTGAAGTTTAAATA ACATTAGTATGTAACTGGAACTAAAATTTTATATTTTTTTTTTTTTGCTAACCTCATACTATTCCGAAAGATTAGTTCCTTGTAAGGATGACAATGGGTT CCGCAGAAAACACCGGCAATGAGTCGGGTCGTTGGACCCATGAATAATTGAGATGTGAAATTTTAAGATTCACTATTAGATGGGTCTGGGTCTGGATAAT AAGGTACTCAGACCGACGAGTACCAGGACCCGCTATTCCTTCCTAATATATAAATTATTAATTGATAATATTATATTATTAATTTATAAATATGATTGAT ATGTTGTTAAATAATGATGTTACACCGTTAAGTTGTGAGGTAATGTTATGTTGTTAATTGATATGTGTAATCTAACATTATATTGATTGAACAATTCTTA TTAAATTAATTTTACATCATAATATTGAAATAATCAATTTAAAATTGTGAAGAAGATCTTGCTCCTGACCTTGTCACGGTTTTGATGAACACACCAACAT CATCAAAAAGAAGAAAAGGAAGATGACTTATGAAGACAAAAGAAGATAAAGCTTCAAGAC BLAST |
| Tissue | pods |
| Gene name | LI_gene_143349; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_320376
| Blastp | DDRGK domain-containing protein 1 from Arabidopsis with 69.1% of identity |
|---|---|
| Blastx | DDRGK domain-containing protein 1 from Arabidopsis with 69.1% of identity |
| Eggnog | DDRGK domain containing 1(ENOG4111IPW) |
| Kegg | Link to kegg annotations (AT4G27120) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019443092.1) |
| Pfam | DDRGK domain (PF09756.8) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |