Ll_transcript_319675

• Id Trinity: TRINITY_DN46268_c3_g1_i4
• Name Transcript: Ll_transcript_319675
• Sequence: CACAATTCTAAAGCCTTTCTAATTTCTATTATCATCTTCAATTTCATCGTTTTTTTGTGCTTCGAATCCTCTGAATTCCATTCTCAATTATCAATTCCTT CAATATTTCAGGAAGGACTGAATGATCTGATGGAGTATAAAGGTGGGAAGAAGAAGTCTAGTAGTAAGTCCTTTTTATACGAAGCTCCTCTCGGTTACAC AATTGAAGACGTTCGACCAAACGGTGGAATCAAGAAGTTCCGATCTGCTGCTTACTCCAACGTAAGTTCCTGTTTCATTAATCTCATTCTGAAAAATGGG TAGCTTTAGTATTAAAATGATTCAATTTGAATATAACACTTCGGTTTTTCGTTGTACAGTGCATCCGCAAACCATCTTGAAATCGCCTGTGTGAGCGTCC CCTCATTGATTTCTTTATACCGTGATATCATTCTTCTGCTCTCAACTTCACTGTTCATTGCTATTTCTGTTCTCCCGTTCTCTGTTTGTTCTTCAACAAC TTGTTTCTTTGAGTTAAAGATGGCTCTGATTGGCTCAGCTATTGGGTTTGAAGGCTATGAAAAGCGGCTCGAGATATCATTTTTCGAGCATGGTGTGTTT GCTGATCCTGGCGGATTAGGCCTCCGAGCATTGTCTAAAGACCAATTGGATGAAATTCTAAAACCAGCAGAGTGCACTATTGTTTCCTCACTATCAAATG ATTATGTTGATTCTTATGTTCTTTCAGAGTCAAGCCTGTTTGTTTACCCGTTTAAAGTTATTATCAAAACTTGTGGGACTACGAAATTGCTTCTGTCTAT TCCCGCAGTTCTTAAGTTGGCTAGTGCTCTTGACATTGCTGTGAAATCTGTGCGGTACACTCGCGGAAGCTTCATCTTCCCGGAAGCACAGTCATTCCCT CATCGTAGCTTTTCGGAGGAAGTTGCTGTTCTCGACAGCTATTTTGGCAACCTTGGTTCTGGTAGTCAAGCGTACGTGATGGATGACCATGACAAGTCTC AGATTTGGCACATCTACTCTGCTAGTGCAAAGCCAAAAGGCTCTTCAGAAGCGGTCTATAGCCTCGAGATGTGCATGACTGGTTTGGATAAGGAAAATGC ATCTGTGTTTTTCAAACAAAATACATGTTCAGCAGCTTTGATGACCGAAAAATCTGGAATCAACAACATCCTTCCACAATCTGATATCTGTGATTTTGAA TTCGACCCTTGTGGGTATTCGATGAATGGAATTGAAGGGAGTGCAATATCCACTATCCATGTAACCCCAGAAGATGGTTTCAGCTATGCAAGTTTTGAAG CTGTGGGTTACGACTACGAAAACAACTTGCTGGCTGAGCTTGTTGAAAGGGTTTTAGCATGCTTCCATCCGGCTAAGTTTTCTGTTGCTTTGCATATCGA CATGCATGGCGAAAATCTCGTTGACAAATTCCCTCTAGACATCAATGGATACTACTGCGGACAGAGGAACAATGAACTGCTTACGGAAGGTAGTGCAGTT TTGTATCATACCTTTTTTCGAGCCGATGGCTGTGCATCTCCCAGGTCTATTCTCAAATGCTGCTGGAGTGAGGATGAGATCGAAGAGGAAGTGGGAGAGA AGATATAGTTCTGGACTTTATGTTTTGCTGTGGTTTATTTTACTTAAATAAATTTGAGTGTTATGTTGTGAGGGCGCAACATTAAACTCAATACATTATG CTCTGCTTGATTCTGTGGTTTCTCTTTTAGTTCTAATTCAAGCTTTCGGGTTTGTCTCAGACAGTGTATATGCTATATCTGTTGTAAAAGGGTGTTGCAC CAGTATTTTGTTGTTAAATAAAATGAGTGGTTGCTATAATATAATTTAATCTGTTTAGATTAGTTTGGTTATCAACACATGTTAAATAATGCAAATTCTA TATCAGATGAACCTTCCCAAAGGTGTTCATTCTGAAATTATGCCAATAGTAGTTGTTTTTCTTGTTTTTAGAGGATTCTTTACTGTTAAATATGTTTTGC AGTGGGGAATGGAATTTTGAGTTTAAAGGGTTTCAGATGCAA
• Tissue: pods
• Gene name: LI_gene_143408;
• Additional information: details;

Expression of Ll_transcript_319675

FPKM

• PAB: 0.7
• PNAB: 0
• PS1: 0.2
• PS2: 0.9
• PS3: 0.8
• PW1: 0.3
• PW2: 0.4
• PW3: 0.7

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_319675

• Blastp: S-adenosylmethionine decarboxylase proenzyme from Ipomoea with 67.59% of identity
• Blastx: S-adenosylmethionine decarboxylase proenzyme from Ipomoea with 68% of identity
• Eggnog: -
• Kegg: -
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019456100.1)
• Pfam: Adenosylmethionine decarboxylase (PF01536.15)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;