| Id Trinity | TRINITY_DN46268_c3_g1_i5 |
|---|---|
| Name Transcript | Ll_transcript_319676 |
| Sequence | GCGGTTACGTTGCGGCCGATGCGGTTACGTTGCGGCCGATGCGACTGCATCATTGTGATTGGGAATCACACCAATTGTGGTGTGATGCGGTTGCGGCAGT CACCGCAACTGCAATATTGTGTCCCAATTTAAATAACTGAAGATAATAAAGATTTCTTAGGGGTGCTGTTGTGTTTTTCAATTTGATTATTATAAAGAAT CGTGAGGCCTTGTTGGCAAATGTTCACAATTCTGTTGTTCTTTGTTGGTGATTTTGTGGCCATCTTAGAATGCTTAACGTTTCTTGTAATTCCAAAATTT GTTTTAAGACATTTAAGGCTTTAATAATTGTTATATTGTTGATTGCATTTATATCAATTAACATTAAGAAATTTAGTATGAGCATCTGACCTTAATTGTG TATTTATTTTTCAACCATTCGAGATGTTACATTAAGAATTCCTTCCAAGTTGCTATTTTCTCTTCTATCATTTACTTGAGTTCTGTGTTATTAAGTGTTG GAGTTGAATTGTTTTTTTGTTTGTGATTTAGCAGGAAGGACTGAATGATCTGATGGAGTATAAAGGTGGGAAGAAGAAGTCTAGTAGTAAGTCCTTTTTA TACGAAGCTCCTCTCGGTTACACAATTGAAGACGTTCGACCAAACGGTGGAATCAAGAAGTTCCGATCTGCTGCTTACTCCAACGTAAGTTCCTGTTTCA TTAATCTCATTCTGAAAAATGGGTAGCTTTAGTATTAAAATGATTCAATTTGAATATAACACTTCGGTTTTTCGTTGTACAGTGCATCCGCAAACCATCT TGAAATCGCCTGTGTGAGCGTCCCCTCATTGATTTCTTTATACCGTGATATCATTCTTCTGCTCTCAACTTCACTGTTCATTGCTATTTCTGTTCTCCCG TTCTCTGTTTGTTCTTCAACAACTTGTTTCTTTGAGTTAAAGATGGCTCTGATTGGCTCAGCTATTGGGTTTGAAGGCTATGAAAAGCGGCTCGAGATAT CATTTTTCGAGCATGGTGTGTTTGCTGATCCTGGCGGATTAGGCCTCCGAGCATTGTCTAAAGACCAATTGGATGAAATTCTAAAACCAGCAGAGTGCAC TATTGTTTCCTCACTATCAAATGATTATGTTGATTCTTATGTTCTTTCAGAGTCAAGCCTGTTTGTTTACCCGTTTAAAGTTATTATCAAAACTTGTGGG ACTACGAAATTGCTTCTGTCTATTCCCGCAGTTCTTAAGTTGGCTAGTGCTCTTGACATTGCTGTGAAATCTGTGCGGTACACTCGCGGAAGCTTCATCT TCCCGGAAGCACAGTCATTCCCTCATCGTAGCTTTTCGGAGGAAGTTGCTGTTCTCGACAGCTATTTTGGCAACCTTGGTTCTGGTAGTCAAGCGTACGT GATGGATGACCATGACAAGTCTCAGATTTGGCACATCTACTCTGCTAGTGCAAAGCCAAAAGGCTCTTCAGAAGCGGTCTATAGCCTCGAGATGTGCATG ACTGGTTTGGATAAGGAAAATGCATCTGTGTTTTTCAAACAAAATACATGTTCAGCAGCTTTGATGACCGAAAAATCTGGAATCAACAACATCCTTCCAC AATCTGATATCTGTGATTTTGAATTCGACCCTTGTGGGTATTCGATGAATGGAATTGAAGGGAGTGCAATATCCACTATCCATGTAACCCCAGAAGATGG TTTCAGCTATGCAAGTTTTGAAGCTGTGGGTTACGACTACGAAAACAACTTGCTGGCTGAGCTTGTTGAAAGGGTTTTAGCATGCTTCCATCCGGCTAAG TTTTCTGTTGCTTTGCATATCGACATGCATGGCGAAAATCTCGTTGACAAATTCCCTCTAGACATCAATGGATACTACTGCGGACAGAGGAACAATGAAC TGCTTACGGAAGGTAGTGCAGTTTTGTATCATACCTTTTTTCGAGCCGATGGCTGTGCATCTCCCAGGTCTATTCTCAAATGCTGCTGGAGTGAGGATGA GATCGAAGAGGAAGTGGGAGAGAAGATATAGTTCTGGACTTTATGTTTTGCTGTGGTTTATTTTACTTAAATAAATTTGAGTGTTATGTTGTGAGGGCGC AACATTAAACTCAATACATTATGCTCTGCTTGATTCTGTGGTTTCTCTTTTAGTTCTAATTCAAGCTTTCGGGTTTGTCTCAGACAGTGTATATGCTATA TCTGTTGTAAAAGGGTGTTGCACCAGTATTTTGTTGTTAAATAAAATGAGTGGTTGCTATAATATAATTTAATCTGTTTAGATTAGTTTGGTTATCAACA CATGTTAAATAATGCAAATTCTATATCAGATGAACCTTCCCAAAGGTGTTCATTCTGAAATTATGCCAATAGTAGTTGTTTTTCTTGTTTTTAGAGGATT CTTTACTGTTAAATATGTTTTGCAGTGGGGAATGGAATTTTGAGTTTAAAGGGTTTCAGATGCAA BLAST |
| Tissue | pods |
| Gene name | LI_gene_143408; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_319676
| Blastp | S-adenosylmethionine decarboxylase proenzyme from Ipomoea with 67.59% of identity |
|---|---|
| Blastx | S-adenosylmethionine decarboxylase proenzyme from Ipomoea with 68% of identity |
| Eggnog | - |
| Kegg | - |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019456100.1) |
| Pfam | Adenosylmethionine decarboxylase (PF01536.15) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |