Id Trinity | TRINITY_DN46276_c7_g1_i17 |
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Name Transcript | Ll_transcript_318710 |
Sequence | GAAAACGTGTAATAATAGTAGAAATGGCTTAGTCCTGTTGTTGCATCCTTTGTAGCCACACACTTAAAACATCATCAGCTACAATATACATCATCTTTTC TTCACACTCTTCTTTGTTTCCCATTTTCATGAATTCTTCTTACCACCTTCAACTATTCAACTTCAGCACATCATTAACAACAACAACAACAACACCAACA TGCACCAAGTTGTTGTTACCCAACATGCTTCATCGTCTCTTCTTTGTTTTGCTTCATTCCAATCCCAACATAAACATAAACATAAACACAAACAGAAACA GAAACAACAACATCAACATTATCCTTTGTTCTTCATCACTCACCAATGATCACTCCTTTAATTCCATCCCTAAACCAACCCACCAGTTTGGTTACAACTC TCCGGAGGAACTCTTCGGGCTGGAGGTGGAACACAACCCCAGGTCTCAATTTATTTTTATTTAATTACTTTTCTTCAATAATTATGAATATTGGAGTCTA TGCTTTTAATTTGCTTCTTCACTAATAAATAAATGTTTTTTTTATCTCTTATGTTATGTTCAGTTAACTCAGCAGCATATAGAAAAATTCTACAGTTTTG GGTATGGTGTTTCCAGAATTATACATGTCTACCTAATAAAATATTACATAAAATCAATAATATCTTGCAACATCTGGAACTTGTTGCCAATGCCATCACT TCAATTTATTACCTCTTTCATATAATGTCAGTAAGTTTGAGTTATGCAGTATGGTTAATTACAAACTCTCTTCACTATCTTCAGACAATCGTTTTCATAT TATTGCATTTCAATTACTCAAAATAGATAATTAACATTTTAATGTTGGTATGATTATTTCATATTAGATGCTATATGATGAAGGGTTGTTCAATAAATTT AGAATTTTCATTTCAGCAAAGGCAACTCTCGTACACCAGAACCGAGGTCATGGTTTGGTCCGAATGGACAGTATATCAGAGAGCTACCTTGTCCAAGTTG TCGCGGAAGGGGTTATACTCCTTGTACAGAGTGTGGAATAGAAAGATCAAGATCAGACTGTCCCAAATGTAATGGAAAGGGTATAGTGACTTGCCACAAG TGCTCAGGAGATTGTGTTATATGGGAAGAATCAATTGATGAACAACCTTGGGAGAGAGCTCGTTCTGTTTCCCCACTTAAAGTGAAGGAAGACGATGAAG TTGACAGTTTAGACATAAAGTTAGATGTGAAGAAAAAATCCAAGCGTGTTTACCAATCACCAACTCCTGAAGTCGGATTGAAGATTAGTCGGTCATTAAA AGTAAGTTGGATGCTTAACCTTACTTCCATTATATTGCATAACCTTCTTTACACGCTTATATTGGATACAAATTGTTAATATGCATATATTTTGCATGAA TCTCAGAAGTTGAGCCTGCTGTCTTGTTCCTTTCATTGATTAACATATATAGGACACACACAGACTGTTAAAAGTAAATGTAATACAGAGGACAGTTATA TTTGTATAATGATTTAAATTCTATGCGCATGTTTGTTGTTGGATTTGTTTATGGAGCATTAACATGATAATCTGAAAAAAGAATTTATTTATGTTGCTTT GGTTGCAAATTTAAGTATCTTTTTGTAGTTGGATGATTGCAGAGTCTCAATGCAAAAACTGGTCTATTTAGCAACCACATGAAGATTATCCACCAAGATC CCATGCTTCAGGCACAGAGAGTTGCTGCCATTAAGAAAGCCAAGGGAACTGTTGCAGCAAGAAAGCATACTTCCAAAACTATGAAAGCTTTCTTCAGTGA TCCAATAAACCGGCTAAAAAGGAGCATCGCTATGAAGGGAGTGAAATTCTACTGCCAACATTGTGGGCGCGAAGGGCATAGGAGACATTACTGTCCAGAA ATCAAAGGTAGTTTGATCCGTTGGCAATACGCATGTCGGCTATGTGGGGGAAAAGGCCACAACAGAAGAACATGTATAAATTCAAGGATAAGCCATACTG GCGGGAGTGTTAAAAAACAGTATCGGTGTAAAATATGTCATCGTTACGGTCATAACCGTAGGGCGTGCCCTCAAGTTGTTTCTAATAAAAGAAGGGACCT GGCTTCTCAAAGAACATACAAGTGTCGGTTGTGCCACAAAGAAGGACACAATAGTAGGACATGTCCTAGTAGGACAGTTGTTGCTGAGCATTCACAAGAG GAACAATCAATGAACTAGTAGGAGCATTATTACTGAAAATCCTCTAATTTTAATAGTCCTACTTGGGAAAAGCACAAGCATATCTAGCTAAATCTTAATG AGGACAGTAAGAAGAATTAGAAGAGATTTATATATTTTTTGGCTGAATCTTATGTATCTGCAGCAGTACCTATTGAGTAATGGTGCACAAGTATAAATAA TTAGTCAGAAATTTAACTGAACTTTGATAGGTGTGAGGGCAGTAATTGGATAAAGTTCTAGGGACCTGTCATATTACTCATATATCCAAGAGTCAATATG TGCGTGCCTTTATCCTAACAAATTCTGGCAAATTTGTTTTTGTCTGTACTATTTTTGTTATTTTAATTTGTATGGATAATTAGGCATTTTACACTGTTAT ATTTCCCTATGATGTTGGAATTATCATATATTGGTGCAGTTGAAGGATGGAGAATTCATGTTGTAATGTGAAGTCCTAACCAACAAGGTGTTGATC BLAST |
Tissue | pods |
Gene name | LI_gene_143458; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_318710
Blastp | DNA-binding protein HEXBP from Leishmania with 33.96% of identity |
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Blastx | DNA-binding protein HEXBP from Leishmania with 33.96% of identity |
Eggnog | zinc finger(COG5082) |
Kegg | - |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019446859.1) |
Pfam | Zinc knuckle (PF14392.5) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |