Ll_transcript_318957

• Id Trinity: TRINITY_DN46280_c0_g1_i2
• Name Transcript: Ll_transcript_318957
• Sequence: AAAGATTCTTATATGTTTTTTAGCTTATTTATTTTCATATTAGCCAGAAAAGAGTCTAATACTGTTTGGAAAACCAAACTCCCCATGATCCATTTCTTGA ATATTTCTTACAGGCTGGTTTAATGTCATGATTAAGCGCTTTCTATAAAAAGCAGTTTGAATATTGCTTAGTGTATAGCACCCTGAAAAGGATAAAATAT TGTTGGCAACACAAGAATACAAGTGCTCAATGTACACAGCATAGAAGAGCAGGAAGGGAATTCCATTCCTCTTGACATAATTTAAAAATTCACTTACGAT GTTGCTTTAACCGATTCTTTATTTTGCTTATATTTTAGACGTGTTTTCTGTTACGTAATGCTAATCTCTGTATGAAAAATTTATGATGTGATTCTTGTAA CGCTGTCTGAGATGCAACTATTGATGATACAGATCCTTCCTTCTTGCCATTTGAATTTGCCCATTGTGATTACAGGGTTTACATGTGCTTGTGTGATTTT GTTGCATTTGGCAATTATTTTCTTTTTCGGATCAAACACATTATTTTGTCTTCTCACAATTTCGGAAAATGATTTTATGTATTTTAGGTATGTCATTGAC TCTGGGTATGTGAAGCAAAGGCAGTACAACCCATCTGCTGGCATGTATTCTCTTGATGTTGTTCAAATTAGCAAAGTGCAAGCTAATCAGCGTGCAGGCC GAGCTGGACGAACTCGTCCAGGGAAATGCTATCGTCTATATCCTTCTCGAGTTTATGATGATGAGTTCTTGGATGCTACAGTTCCTGAAATACAGCGATC TTCTCTCGCTGGCTGTGTTCTTTACTTGAAGTCATTGGACCTTCCAGATATTGACATTCTCAAATTTGACTTTCTTGATCCTCCTTCATCTGAGTCCTTA CAAGATGCCTTGAAGCAATTATATCTGATTGATGCAATTGATGAAAATGGTGCAATTACAAGTATTGGACAAAAAATGGCTGAACTTCCGTTAGAACCAT CCCTCTCGAGAACCTTAATGGAGGCAAACAATTATGGTTGCATTTCCGAGGCTTTGACTGTTGCTGCCATGTTATCAGCTGAAACTGCATTGCTATCAGC ACCAGGGCGGAGCAAGACTGAGAGAAAGAGGAAAAACCCAGTAACTAATCTTCCTGATGGTTCTGGCTTGGGTGACCACATTCAATTGCTGCAGATATAT GAGTGTTGGGATCAAACTGATTATGACATTGGTTGGTGCAAAGATAATGGCTTGCAGGTGCGAGGGATGTTGTTTGTTAAAGATGTCCGTAAGCAGTTAT CTCAGATAATGCAGAAAATAGCGAAAG
• Tissue: pods
• Gene name: LI_gene_143469;
• Additional information: details;

Expression of Ll_transcript_318957

FPKM

• PAB: 0.1
• PNAB: 0.2
• PS1: 0.1
• PS2: 0.2
• PS3: 0
• PW1: 0
• PW2: 0.1
• PW3: 0.5

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_318957

• Blastp: Probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH4 from Arabidopsis with 79.84% of identity
• Blastx: Probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH4 from Arabidopsis with 79.84% of identity
• Eggnog: helicase(COG1643)
• Kegg: Link to kegg annotations (AT1G27900)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019460166.1)
• Pfam: Helicase associated domain (HA2) (PF04408.22)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;