Ll_transcript_318962

Id TrinityTRINITY_DN46280_c0_g1_i7
Name TranscriptLl_transcript_318962
SequenceCTTTTATTTTACAGATTACCCAAATGGTTTTCCAATTTCTCAATTCACCCCTTAAAGTTCATTTATTTGAAGTATTAAATCACCTTATACTTGAACAATT GCACTTCTGATTCAAGCTTTGGTTTCTCTACTCTTTCCATGGCCACTCTTCCAATACTCCAACACGAAGAAAAGATAATACAAACCGTTAACCAAAACCC TGTTGTTGTAATCATTGGAGAAACCGGTTCCGGAAAGAGCACACAACTCTCTCAGATTCTTCACCGCCACGGTTACTCCAATTCCGGCAAAATCGCCGTC ACTCAGCCCCGCCGTGTCGCCGCCGTATCTGTCGCTAGACGAGTTTCTCAGGAGCTTGGGGTTCATCTTGGTGAGGAAGTTGGGTATGCAATTCGATTTG AGGATAGGACTTCACATGACACACGCATAAAATACCTAACTGATGGGGTCCTCCTCCGTGAAAGTCTAGCTGATCCCGAGCTAAATGATTATTCTGTAGT CATATTGGATGAAGCTCATGAACGAAGTTTAAACACGGATATATTGATGGGGTTGATGAAACGCTTGGTTAAAGTTCGTTCCTCTGACTTCAAAGTTTTG ATCACATCAGCGACTCTTGATGGCAATAAAGTATCTAAGTTCTTTACAGATTGTCCTGTCTTGACAATTCCAGGAAAGCTGTACCCAGTCGAGATACTTT ATAGCAAGGAGCGCCCCTCAAGCTATCTCGAGTCTTCTCTGAAAACAGCTCTTGGTATTCCGAGGAGTTTTAACTTCATCTTCTTTCCATAATACATGTT TTAATAGTACCTATAATTTTTAGTATACCGTGCATGGTGTCTAAATAAACTTGCGCTGGCACCATGTGGTCAGACAAAAATTATGTCAATATGTTAACTT TTTGCCTGGCTCATTGCATATGATATAAACTCCTACATGACATGCGTTTTGTCATCTGTTAAGCTTTCTCTTTAAAAAACTGGTATTGGCCCTTAAAAAG AGCATGATAAAATTATTGCATATAAGTAAACAAGATGCTAAGGCCTAAGAGGGTGATGCATTTTAAATCTGAATTGTGAAATTGTTGATATTGATGTAAA ATATTACACTCATCTCCTTTAGGCTTTAGCTCCTTCGATGATTCAATGGCTGGTAACTTTTCAAATAGAAAGTCAGGAAATATTGTCAAGTTCTATCAAC TTGACCTGTATGCACTCCAGTTCAGATGTACTATTTTCTGTAGTTTAACCTTTTATTTTCAGATATACATGCTCGTCAACCAGAAGGGGATATTTTAATA TTCATGACTGGACAGGATGATATAGAGAAGTTGGTATCTAAGTTGGAAGATAAAGTTCGGGCTCTTGAGGAAGGTTCCTGCATGGATGCTATAATCCTTC CCCTACATGGTTCTTTGCCACCTGAATTGCAGGTGCGTGTATTTAGTCCCCCACCTCCAAATTGCAGACGAATTATTGTTGCAACAAACATTGCTGAAAC TTCTTTGACTGTTGATGGTGTAGTGTATGTCATTGACTCTGGGTATGTGAAGCAAAGGCAGTACAACCCATCTGCTGGCATGTATTCTCTTGATGTTGTT CAAATTAGCAAAGTGCAAGCTAATCAGCGTGCAGGCCGAGCTGGACGAACTCGTCCAGGGAAATGCTATCGTCTATATCCTTCTCGAGTTTATGATGATG AGTTCTTGGATGCTACAGTTCCTGAAATACAGCGATCTTCTCTCGCTGGCTGTGTTCTTTACTTGAAGTCATTGGACCTTCCAGATATTGACATTCTCAA ATTTGACTTTCTTGATCCTCCTTCATCTGAGTCCTTACAAGATGCCTTGAAGCAATTATATCTGATTGATGCAATTGATGAAAATGGTGCAATTACAAGT ATTGGACAAAAAATGGCTGAACTTCCGTTAGAACCATCCCTCTCGAGAACCTTAATGGAGGCAAACAATTATGGTTGCATTTCCGAGGCTTTGACTGTTG CTGCCATGTTATCAGCTGAAACTGCATTGCTATCAGCACCAGGGCGGAGGTTGATTTATATATAGATATAGATATAAGCAAGAGTCACAAGACACACACT TTCAAGTTTCAACCAAATAAAAAAACACCTTTCCTTTTAAAAAATGCACAAAATTTGTATTTATGAAGGCATTTTATCTTTCAAGGCTTATAATGCTAGA TAAATTGACAATTTTTTATGGTTAAAATGCCACAGCCATGTTGGTCTTTCTTTCCAATTTTATGGAGAGAACCTTTAATCAGGAGAAAGAAACTGCTAAG GGGGGATTCTGTTAACATGGAAGAGTCAGAAAAGTAAAAGAAACAATTATTATCATTTGATCTTGTATGAAATGACTTAAATGCCCTCAAGTCCTATGTA CTCTTAAGAGGAAAGTGAGTGATTACTTGGTCAAATAAAATTTTGGATGCTCTCCTCTAGGCATAGTTGAGTAGGCTAGCATCCCCCACAAAATTGACAC ACTCGACTGAATTTCCATAAACTACACGCTTATAAAATGTTTTTCAACTTCCATGCTTGTATATAATTTGATATAGCAACTTTCATTAGCTACATGCTTA TGTAGATTACATGATGTATTTCTTCTGTTTTCTGGATGTTCTGTACATTTAATATTTTCGAGGAAATAGTAACCGAGCTGTAACAATTTTTTTTACTGGA CAGCAAGACTGAGAGAAAGAGGAAAAACCCAGTAACTAATCTTCCTGATGGTTCTGGCTTGGGTGACCACATTCAATTGCTGCAGATATATGAGTGTTGG GATCAAACTGATTATGACATTGGTTGGTGCAAAGATAATGGCTTGCAGGTGCGAGGGATGTTGTTTGTTAAAGATGTCCGTAAGCAGTTATCTCAGATAA TGCAGAAAATAGCGAAAGGACCATTGGATATAAGGGCAAATGGGAAAGGAGAAGAGTTCCGCAAGGGTTATCGAAATTTGAGAAAAGCTTTATGTACGGG CTATGCGAATCAGCTGGCTGAAAGAAAGATGCATCACAATGGTTATCGAATTCTGGGTTTTCAAGCCCAGGTAGTCCAGGTGCATCCATCATCCATGCTG AAAGCCGATGAACTGGGCAAGTTCCCGGACTATGTTGTATACCATGAGCTGATTGCAACTCCACGGCCATACATGAGAAACGTGTGTTCTGTTGAGATGA GATGGGTTGTACCCATTATTAACAAGCTTAAGACACTAGATGTGTACAAATTAAGTGGTGGTGTTGAACACATTGAGGAGGAAACTGAGAGAAATCTCCC AGATTTGCCCAAAAAGGATGTTGAGGTTGCTGCATCCGGTGATGACCGTGAAAGTAGAATACAAGCCGCTAGAGAACGATTCCTTGCTCGCAAAGGCAAA AAATGAGCGCACTTACACTCGAGGAGATCGTGATATTCACATGTTAGGCATTTTAGAAGAGCAAGTCAGTTGTTAAATTTCTCTGAATGCGACAAGCGGG ATGAACCCAGATTTAAATTTTCGTGTTATCACAATTCAATGGTTTGATATCATGCCAATTTCATCCTCATGCAAATATCTCTTGCAAGCATAGGAGGATT CAGCGCAGAAAACTTAAGATTGGACTTCATTCTGCTATGATAAATTGGTTGAGTTATTGAATACATTGCTTGCCTTGCAGAGTGTGCACGATATCAAGTA TCTTGTTATGCTTCTTTGTTACTGTAATGTAGCTGAAGTGGGAAAGAAGACAAGGAAAAATGGAGAGAAAAATTAGCAAGCCCCTTAAAAAGCAAATGTT GATTGAACAATTCTAAGGGTGTTTTGGCTTTATAGACATCAAAATGAGTTAATTACCATTTATTGCCACTTTTTCTTTAAAGGTATAATTTTACATTTTC CTTGCTTTGTAACGGGTCATGTAGTCTTTCAGCAATCTCATGAAAAAAATTACACTTCTAAAATCGGGACATATTCTATCTCAAAAAGTGTATCACTCCA TATGCCACTTCGTGTGATTGGTCAGAA BLAST
Tissuepods
Gene nameLI_gene_143469; 
Additional informationdetails; 

Expression of Ll_transcript_318962

Labels

PAB abscising pods
PNAB non-abscising pods
PS1 seeds stages 1-3
PS2 seeds stages 4-6
PS3 seeds stages 7-8
PW1 pods wall stages 1-3
PW2 pods wall stages 4-6
PW3 pods wall stages 7-8

Annotations of Ll_transcript_318962
BlastpProbable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH4 from Arabidopsis with 86.12% of identity
BlastxProbable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH4 from Arabidopsis with 86.1% of identity
Eggnoghelicase(COG1643)
KeggLink to kegg annotations (AT1G27900)
CantataDB-
Mirbase-
Ncbi proteinLink to NCBI protein (XP_019460166.1)
PfamHelicase conserved C-terminal domain (PF00271.30)
Rfam-
GOLinks to GO: General; Genes and gene products; Annotations; Ontology;
Links to GO: General; Genes and gene products; Annotations; Ontology;