Ll_transcript_318963

Id TrinityTRINITY_DN46280_c0_g1_i8
Name TranscriptLl_transcript_318963
SequenceCTTTTATTTTACAGATTACCCAAATGGTTTTCCAATTTCTCAATTCACCCCTTAAAGTTCATTTATTTGAAGTATTAAATCACCTTATACTTGAACAATT GCACTTCTGATTCAAGCTTTGGTTTCTCTACTCTTTCCATGGCCACTCTTCCAATACTCCAACACGAAGAAAAGATAATACAAACCGTTAACCAAAACCC TGTTGTTGTAATCATTGGAGAAACCGGTTCCGGAAAGAGCACACAACTCTCTCAGATTCTTCACCGCCACGGTTACTCCAATTCCGGCAAAATCGCCGTC ACTCAGCCCCGCCGTGTCGCCGCCGTATCTGTCGCTAGACGAGTTTCTCAGGAGCTTGGGGTTCATCTTGGTGAGGAAGTTGGGTATGCAATTCGATTTG AGGATAGGACTTCACATGACACACGCATAAATGAGGGTCATTTGATTTGACTTAATTTGATTAGATACCTAACTGATGGGGTCCTCCTCCGTGAAAGTCT AGCTGATCCCGAGCTAAATGATTATTCTGTAGTCATATTGGATGAAGCTCATGAACGAAGTTTAAACACGGATATATTGATGGGGTTGATGAAACGCTTG GTTAAAGTTCGTTCCTCTGACTTCAAAGTTTTGATCACATCAGCGACTCTTGATGGCAATAAAGTATCTAAGTTCTTTACAGATTGTCCTGTCTTGACAA TTCCAGGAAAGCTGTACCCAGTCGAGATACTTTATAGCAAGGAGCGCCCCTCAAGCTATCTCGAGTCTTCTCTGAAAACAGCTCTTGGTATTCCGAGGAG TTTTAACTTCATCTTCTTTCCATAATACATGTTTTAATAGTACCTATAATTTTTAGTATACCGTGCATGGTGTCTAAATAAACTTGCGCTGGCACCATGT GGTCAGACAAAAATTATGTCAATATGTTAACTTTTTGCCTGGCTCATTGCATATGATATAAACTCCTACATGACATGCGTTTTGTCATCTGTTAAGCTTT CTCTTTAAAAAACTGGTATTGGCCCTTAAAAAGAGCATGATAAAATTATTGCATATAAGTAAACAAGATGCTAAGGCCTAAGAGGGTGATGCATTTTAAA TCTGAATTGTGAAATTGTTGATATTGATGTAAAATATTACACTCATCTCCTTTAGGCTTTAGCTCCTTCGATGATTCAATGGCTGGTAACTTTTCAAATA GAAAGTCAGGAAATATTGTCAAGTTCTATCAACTTGACCTGTATGCACTCCAGTTCAGATGTACTATTTTCTGTAGTTTAACCTTTTATTTTCAGATATA CATGCTCGTCAACCAGAAGGGGATATTTTAATATTCATGACTGGACAGGTGAACATTTTGTTATATGGATGATATAGAGAAGTTGGTATCTAAGTTGGAA GATAAAGTTCGGGCTCTTGAGGAAGGTTCCTGCATGGATGCTATAATCCTTCCCCTACATGGTTCTTTGCCACCTGAATTGCAGGTGCGTGTATTTAGTC CCCCACCTCCAAATTGCAGACGAATTATTGTTGCAACAAACATTGCTGAAACTTCTTTGACTGTTGATGGTGTAGTGTATGTCATTGACTCTGGGTATGT GAAGCAAAGGCAGTACAACCCATCTGCTGGCATGTATTCTCTTGATGTTGTTCAAATTAGCAAAGTGCAAGCTAATCAGCGTGCAGGCCGAGCTGGACGA ACTCGTCCAGGGAAATGCTATCGTCTATATCCTTCTCGAGTTTATGATGATGAGTTCTTGGATGCTACAGTTCCTGAAATACAGCGATCTTCTCTCGCTG GCTGTGTTCTTTACTTGAAGTCATTGGACCTTCCAGATATTGACATTCTCAAATTTGACTTTCTTGATCCTCCTTCATCTGAGTCCTTACAAGATGCCTT GAAGCAATTATATCTGATTGATGCAATTGATGAAAATGGTGCAATTACAAGTATTGGACAAAAAATGGCTGAACTTCCGTTAGAACCATCCCTCTCGAGA ACCTTAATGGAGGCAAACAATTATGGTTGCATTTCCGAGGCTTTGACTGTTGCTGCCATGTTATCAGCTGAAACTGCATTGCTATCAGCACCAGGGCGGA GGTTGATTTATATATAGATATAGATATAAGCAAGAGTCACAAGACACACACTTTCAAGTTTCAACCAAATAAAAAAACACCTTTCCTTTTAAAAAATGCA CAAAATTTGTATTTATGAAGGCATTTTATCTTTCAAGGCTTATAATGCTAGATAAATTGACAATTTTTTATGGTTAAAATGCCACAGCCATGTTGGTCTT TCTTTCCAATTTTATGGAGAGAACCTTTAATCAGGAGAAAGAAACTGCTAAGGGGGGATTCTGTTAACATGGAAGAGTCAGAAAAGTAAAAGAAACAATT ATTATCATTTGATCTTGTATGAAATGACTTAAATGCCCTCAAGTCCTATGTACTCTTAAGAGGAAAGTGAGTGATTACTTGGTCAAATAAAATTTTGGAT GCTCTCCTCTAGGCATAGTTGAGTAGGCTAGCATCCCCCACAAAATTGACACACTCGACTGAATTTCCATAAACTACACGCTTATAAAATGTTTTTCAAC TTCCATGCTTGTATATAATTTGATATAGCAACTTTCATTAGCTACATGCTTATGTAGATTACATGATGTATTTCTTCTGTTTTCTGGATGTTCTGTACAT TTAATATTTTCGAGGAAATAGTAACCGAGCTGTAACAATTTTTTTTACTGGACAGCAAGACTGAGAGAAAGAGGAAAAACCCAGTAACTAATCTTCCTGA TGGTTCTGGCTTGGGTGACCACATTCAATTGCTGCAGATATATGAGTGTTGGGATCAAACTGATTATGACATTGGTTGGTGCAAAGATAATGGCTTGCAG GTGCGAGGGATGTTGTTTGTTAAAGATGTCCGTAAGCAGTTATCTCAGATAATGCAGAAAATAGCGAAAGGACCATTGGATATAAGGGCAAATGGGAAAG GAGAAGAGTTCCGCAAGGGTTATCGAAATTTGAGAAAAGCTTTATGTACGGGCTATGCGAATCAGCTGGCTGAAAGAAAGATGCATCACAATGGTTATCG AATTCTGGGTTTTCAAGCCCAGGTAGTCCAGGTGCATCCATCATCCATGCTGAAAGCCGATGAACTGGGCAAGTTCCCGGACTATGTTGTATACCATGAG CTGATTGCAACTCCACGGCCATACATGAGAAACGTGTGTTCTGTTGAGATGAGATGGGTTGTACCCATTATTAACAAGCTTAAGACACTAGATGTGTACA AATTAAGTGGTGGTGTTGAACACATTGAGGAGGAAACTGAGAGAAATCTCCCAGATTTGCCCAAAAAGGATGTTGAGGTTGCTGCATCCGGTGATGACCG TGAAAGTAGAATACAAGCCGCTAGAGAACGATTCCTTGCTCGCAAAGGCAAAAAATGAGCGCACTTACACTCGAGGAGATCGTGATATTCACATGTTAGG CATTTTAGAAGAGCAAGTCAGTTGTTAAATTTCTCTGAATGCGACAAGCGGGATGAACCCAGATTTAAATTTTCGTGTTATCACAATTCAATGGTTTGAT ATCATGCCAATTTCATCCTCATGCAAATATCTCTTGCAAGCATAGGAGGATTCAGCGCAGAAAACTTAAGATTGGACTTCATTCTGCTATGATAAATTGG TTGAGTTATTGAATACATTGCTTGCCTTGCAGAGTGTGCACGATATCAAGTATCTTGTTATGCTTCTTTGTTACTGTAATGTAGCTGAAGTGGGAAAGAA GACAAGGAAAAATGGAGAGAAAAATTAGCAAGCCCCTTAAAAAGCAAATGTTGATTGAACAATTCTAAGGGTGTTTTGGCTTTATAGACATCAAAATGAG TTAATTACCATTTATTGCCACTTTTTCTTTAAAGGTATAATTTTACATTTTCCTTGCTTTGTAACGGGTCATGTAGTCTTTCAGCAATCTCATGAAAAAA ATTACACTTCTAAAATCGGGACATATTCTATCTCAAAAAGTGTATCACTCCATATGCCACTTCGTGTGATTGGTCAGAA BLAST
Tissuepods
Gene nameLI_gene_143469; 
Additional informationdetails; 

Expression of Ll_transcript_318963

Labels

PAB abscising pods
PNAB non-abscising pods
PS1 seeds stages 1-3
PS2 seeds stages 4-6
PS3 seeds stages 7-8
PW1 pods wall stages 1-3
PW2 pods wall stages 4-6
PW3 pods wall stages 7-8

Annotations of Ll_transcript_318963
BlastpProbable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH4 from Arabidopsis with 85.89% of identity
BlastxProbable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH4 from Arabidopsis with 85.89% of identity
Eggnoghelicase(COG1643)
KeggLink to kegg annotations (AT1G27900)
CantataDB-
Mirbase-
Ncbi proteinLink to NCBI protein (XP_019460166.1)
PfamHelicase conserved C-terminal domain (PF00271.30)
Rfam-
GOLinks to GO: General; Genes and gene products; Annotations; Ontology;
Links to GO: General; Genes and gene products; Annotations; Ontology;