| Id Trinity | TRINITY_DN46292_c0_g1_i4 |
|---|---|
| Name Transcript | Ll_transcript_320395 |
| Sequence | TGGCTTAATATCCTTTCCCTTGTCAGATTATATGTCTCTTTCTGTCAAATTTAGAGTGTGCCTAAATAGATTTTTGTGACAACTAGTGCTCACTTAAGAT CTTCTACTGAAAAAGGATTTTGCTATTTAACGTGGCAAAATGTGTATGGTGAATGGAAATTGCGTGTGAATTAGGAAATCGCTGACCCTATAAACATGTG AAGATGGGATTTTGTTCCTGTTTGATTCCTCTACTTCAGCTTACTAATGTTGTTCTTCATGTCTGATAATTGAGATAGGCTCAGAAGATTCAGTTACTCT TGCCACGATTGCTGTTATGCTAGCATGAAACTTATGTAGCTAATTTCCCTATGCTGGGGGCACTTTTGGCTATAAATTCTGATATACTTTTAAGTATCTT TATATTTGATTCCAATCTTACATTTATGTTTATAATTGATTCTATATATATTTGAGACAAAACCTGTCTGTGTGCTTGATGTTATACATAGCCGGTCCTA AGTCCGCATAAAAAGTGAAGGTTGTGTTAGGTAGTCGACAATCAACGTAAAACTTTGCCAAATCTCTACGATATGGATCTATGTATACCTGAGATGCATG ATAGAAATGAGAATATTGCGTTGGAGGAGTGGATACACTAGATAAGATAGGTTAGGAATGCTTGTATTAGAGAGAAAGTTGGGATAGCTCCTATGATAGA GGTAGAAGGAGACAAATAAAAGCCACAGGTGAAATTATTAAGAATGATTTTGACATTGATGCTTTTGTCAATGGACATGGTTTATGATAGAGTATTATGG TCGTTTGGAATTTTAGTTTTTGCTATGGTACGTGTTAGGAATGATTGGGCAGAGACTGAAAAAAGGTGGATTTGAAATATGGTGTAAACCTTCTTTTCTG GTTGAATGATGTTTCTACTTCAAACTGTGGAGACTCGGTGGTTTCAGCTATCTATGTTCATGCTACTGTAATGCTATACTATTGAGTTTGAGTAGCCAGA CTATACGTCTAAAAATTGTCATGGTTGATCATTTTTAGCTTACTGAGTGCAGTACAGTTCTAAAACACATTCATGAAGTAAGCATAGCTTTATTTATAAA CGTAAATTCTTTATGTCATAATGGAAATTTGGATTGAGTAGTTGTATACTTAGGTGGTTCAGATGAACAAATAAATGTATGTTTCTTTCTTTTGTTTTCG ATTTGAATTTGAATTAGGTTCATTTGACAGGGGATTATCACTATGTCAGCTGCATCAGTTGAGAGAATTGCCTCATTGAGTAGCGATCTCTTCTACGACA TATTACGACATCTCGATGGCCCTACATTAGCTAGTGCAGCATGTACATGTGCAACATTTCGTTCCATCTCAAAAGAAGAGAGGTTATGGGAAAATGTCTG CTCATCTGTGTGGCCCTCAACCAATAGTGAGGATGTCAAAAGTTTGATATCATCTATGGGTGGATTCAGAAAATTCTATGCAGATTGTTTTCCACTTATT GTAAACAAGCAGGTCTCAGAGTATAAACAGAACAACTATGTTGAGTACCCTGAAGATTGGACTGAGGCTGAATATTATGGTGACACTAATGAATTTGAAG TCCTCTCTCCATCAGATTTTGTTTCTATTATTGATACAAGGTTTAAGGGGAAACCAATATGCTCCAAAGTTCTTTGGGGAGTTTCAAATGCGAATGGATC TGATGATTGGTTCTATAACTGCCCTTTCCAGATTGATCTTCTCAGCTATGCTGACAGAGATGATAACAATGATGGTGTGGTTTCCCTTTCTGTATCGGAT GGTTTGCCGCCAATTACATCCATGGAAAAGGAAAGAAAAGACGGGAAGCTGTGGCACGAGCTTTGTGACGGCCTGCAGCTTAGTTGGATTATAGTTAACA GGAGAATGAAGCAAGCTGCTAATCTTGCTAGCTGGAGCCCTCTTGGTGGACAAAGACATTGGCCAACAGATAAGGATTTCGTCATTCGGTTTGGATCGGT TCTTCCTGCCAAGGATATTCTTCCTGCTCAAGTAGTAGAGTGCATCCTTATTATGAAGTTTAGAGTGGTTCACACTGAAGGAGAGGGTGTTCAGACAACT ATTAAGCTAACAGAATTGAGCATGCAATTGGAAGACATGGAAGGTGCTCATGTTAATGGAAGAAACAGTTTGCTTATTCTTAAGGAAGCACTTAGCTGCC AAAGAAGCAAAAATTATAGAGAAGTACTTGAGTCTTGTTACAGGTACTCAAAAGTGCAGAATGAGTTAAAGGAGGAGAAGTTGAGAAATGAAAGTAGGTG GAATACACTTTGTACCTTATGTGGCATTGCTGGTTTTATGACATTCTGGTACTGCTTCTTGTGAAATGCTAGAACATTGTCCCTTTTACAGGAATAAGAT AATGCTGTTTTAACTTATTTCATATTAGAGGAGCTTTTTTCTTTCATAGTTTTATCAATGGGTTTAACACAATTTTGCTACTAGTTCCATAAAAAAATCA ATGATTGAAATGGAATCAATGGATTAAAGTTTAGATTAGGAGAAGACATGTCCCAGGCTAGGCCAAAGAATATCACTAACCTTAACAAGATATGTCCCTG GGTCTTATAGGCATACACCATACCCTTATTTGCTAGAGTCTAAATATTAGATTATTCAGGTCCAAGGCAGATAAAATTAACATTGCTAATTCCATCAGCC AAAAACAGAAATATCATAATATATTAAGCA BLAST |
| Tissue | pods |
| Gene name | LI_gene_143526; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_320395
| Blastp | F-box protein At2g27310 from Arabidopsis with 29.11% of identity |
|---|---|
| Blastx | F-box protein At2g27310 from Arabidopsis with 28.68% of identity |
| Eggnog | F-box protein(ENOG410YK80) |
| Kegg | Link to kegg annotations (AT2G27310) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019441838.1) |
| Pfam | F-box domain (PF00646.32) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |