| Id Trinity | TRINITY_DN46296_c0_g1_i1 |
|---|---|
| Name Transcript | Ll_transcript_319339 |
| Sequence | CTACAGCACTATTCCATGCTCACATCAAATCCAAACACAAAACCACTTCCACCACCAACAACAATAACAATCCTTTGCCCCTTAACCAACCACCCTTTTC AGCTGAACTACAGAATAATAATGTGACCAACAGAAGGAAGTTGATGTCAACATTTGTAGCCACTTCAGTGGCAGTGTTGGGAGTGCAGGGTACCCCACTA GCACTAGCCCAGAACTGGGGCACTAGGTCCTTCCTAAGGGAACATTTCTTTGAGCCAGGGTTGTCCCCTGAAGATGCAGTGGCAAGGATAAAACAAACCG CTGAGGGGTTACATAGTATTAGGGACATGTTGGAAACCATGTCTTGGAGGTATGTCATGTTTTATATACGGTTAAAGCAGGCTTATCTTGACCAAGATTT GAAAAATGCTCTTAGCACTTTGCCAGAAAATCGGCGTAAGGAGTATGTTAAAACTGCTAATGAATTGGTGGACAACATGGCTGAGGTATTCTTAAATGTC AATGAATCACTAAATGTTTTGTTTTTTTGTGTAGTTTAATGCTTTCACGATTGATACTAATATATGTTTATCTTATTACATGTCATACTATGTTATAATA TATCAGCCTAACACATCAAAGAGATATTTTTCAATGAACTTGTGGAAGAATCACCAAAACCAAACCATTTGGCCAATACTATATGTGAACTCTGAACCAA AAGTTATTAAGCTATGGATCTTTACAATATAATTTGAGTATCACACGAAACTTCTTATTTACAAACATGAGACTCATAAAATATAAAAAAATGAGCTTTC TTTACGGAGCTAGATTGTACTTAACTTAATTCCCACCATAAACACCCAGATAGATGTTAATCAGTACTCAACTTTTTCTTCCTTGAGTAATCATGATACA TAAATTGATGTTGTGATTTATTGTTTTTTCAGTTTGATCGGTATGTTCGATCGCCAAAGGTCTATGAATCGTACCTATACTACGAGAAGACATTGAAATC AATAGATGAACTTGTTGCTATGTTAGCATAGCACAAGAAGGAAGCTGCAGAGTATTGGTGTTTGCAATTCTACTTTTTGTGTATAAAACGTCTTGAACAT ATAAGGTAGAATCATAAAATTCATTGTGAAAGCCATGAATGCCATAACATCATTAGAAGTTTGTAGCAGCTGTAAAACATTGATTACACTCAAATTATAA AACTATAACATTTCAAATTGCATATATTGAATCCTCCAACACAAGCCTATAGATCAAGAGACTATCGAGAAAACACACTTTAATACCAAATACACACTAG GAAATTTTCATGAAACAACCTTTTTCAAACCACACTGTGATGAGGAGAAAGGCACAAACACTTGGGAACACATCAATTTCAAGAGATTGCAACGGCTAAT AGGAGGATCAGTATCATGAACAGAAAAACAGCAATCAAAGCCAATCAGCGAGCCCGAAATACGCTCACTTTAACTTCTTTAGATAATTTACTAGTTAAAA TGTTAGCTCATTTAAACAAACTGCCCTAGTTTATAGCTCAAGTCTTGTATAATTCATAAGTTTAGCTTATCCAGCATTATAACTAAAGAATGGTGAAGCT GAACTAAGTTTTCAGCATTACAGGCTTGGTTGGTTTTGGGTGTTGGCTTGTGTTAGTTTGGCCTAAGCCCTCTTTTAGAATTGCATCTACCTTCTCTTGT ATTAGAAAATTGCAGTTTAAGTAATTCTGAACTATTCTGCTGTGTATACAATTTTTACCAGTATGAGGTAGAAGAAAAGTGGCATGCTTTGGCTATTAGT AATTCTTCATACCAAAGACACAAAATTGAAGCACAATAACTATCATGTAACTATCTTCTCTCCTTTACTAAGTGCATCAAGGTAAGGATAGCTGTTGTAC TTGGAGAAAATACACTTTCAATATTACAGAACCTTAAAATTTGAAGGCAAATTGATTGGCCT BLAST |
| Tissue | pods |
| Gene name | LI_gene_143582; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_319339
| Blastp | Photosynthetic NDH subunit of lumenal location 2, chloroplastic from Arabidopsis with 60.14% of identity |
|---|---|
| Blastx | Photosynthetic NDH subunit of lumenal location 2, chloroplastic from Arabidopsis with 61.07% of identity |
| Eggnog | enhancer protein(ENOG410YK3K) |
| Kegg | Link to kegg annotations (AT1G14150) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019459581.1) |
| Pfam | Oxygen evolving enhancer protein 3 (PsbQ) (PF05757.10) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |