Ll_transcript_366132

Id TrinityTRINITY_DN46309_c5_g1_i3
Name TranscriptLl_transcript_366132
SequenceTGACTTTTTTGGCTTCCCTTTCTCATTTTCCTATTTTTGAAAATCTCATTATTGCTTTCTCATTCATCAAAACTACTTTCATTAGTTATATGTATCTTCC AAGCAACAAAAACAAAACTTGTCTTTTGTTCTCAATAACGTGTCCACCATTCTCACTTCATTCCTTCCTTCATTCCCCTTTCTTCTTCCTTCTCCTCAAC TCTTCAAACAAAACACATATTTATTCTTTCTTCATTTTTAAACACTGAAACCCAAACCCATAACCCTTTCTTCTCTCTCTCTTTCTATAACCATGCAAGT TTCATATTCCTCAATGAACTCATGGCTCAAAACACGTGTTCCATTGGAACCATGTTCTACTACTTCCACAACGTTATTTACACCTATCTCGTACTCAACA TGTATTAATGTTTTACATTCACCCCAGTATAAGAATAATAACTGTGTTTCGTTTCTGGTATCTCAAAGAAAAGGTTTTACTACTTTGACCCCAGTTTCAC CGATGAAAAAAATGAGCCGAAAAAGAAGATTTTTCACTGTTTCTGCATTATTTGAACGGTTCACGGAAAGAGCAATTAAAGCAATCATGTTTTCTCAAAG GGAAGCGAAATCTCTTGGTAGTGATTTGGTTTATACGCAGCATCTTTTGTTGGGTCTTATATCTGAAGAAGATCGTTCACTTGATGGTTTTCTTTCATCT GGTGTTACTATTGATAAGGCACGTGATGCTGTTCGTAGCATTTGGCACCAAAATGATAATTCGACAAGTGGTGATGGTGATGGTGATGATGATGGTCGAA GAAGTTATGTTTCTGCATCACATATTCCGTTTTCGATTAGCTCGAAGCGCGTGTTTGAGGCTGCTGTGGAGTATTCTAAGTCTCTGGGGCATAAGTTTAT TGCCCCAGAGCATATTTTAGTTGCTTTAGTCAAAGTTGATGATGGAAGTGCAACCCGAGTTCTTTACAGATTAGGGACAAATGCAAGTCAGTTGGCAGTT GTGGCATTCTCCAGACTACAAAAGGAGATTGCTAAAGATGGTAGAGAACCGAATATGGTGTCCAATGGGGTGCATAACAAATCCGTTTCAAGAAAAGGTT CCGATGCAGGATCCTCTGCCACAACAAAAGAGATGAGTGCCCTGTCACAGTTCTGTGTGGATCTCACTGAACGTGCGAGCGAAGGGCTAGTCGATCCAGT CATCGGCCGAGAAGTTGAAGTTCAGAGAATTATTCAAATACTAGGCCGGAAAACAAAAAGCAATCCCATTCTTCTTGGTGAAAGTGGTGTCGGAAAAACA GCTATTGCGGAGGGGCTGGCAATTCATATTGCTCGGGCGGATATTGCTCCTTTTTTATTGACAAAGCGTATCATGTCGTTGGATGTTGCAATGTTAATGG CTGGGGCAAAAGAGAGGGGAGAACTAGAGGAACGAGTTACGAAATTAATAAAAGAGATAATAAAGTCAGGTGATGTCATTCTTTTCATTGACGAAGTTCA TACACTTGTTCAATCAGGGACAAGTGGGAAAGGAAATAAGGGATCTGGCCTTGACATTTCTAATTTACTTAAACCTGCACTTGGAAGGGGTCAATTTCAG GTGATCATATGCTATGTATTCATATGTTCTAACTTCTAATTGATCCTCAAAGATGATCACATGTTTCGTTTCAAGTCTGGCATAATCAATCTTTCTCTCA AATGGAGGGGTTCCTCGGTCATTTTTAGAGATGGAAGAGAAATAATTATCAACTATTAAAGCAGTTAAAGAACCACCTTTTACTAGGGTAATTCTTATGT GAACCGATCAACCTGGGTCCTATTACTAGAGGGGAAAGTTGTCTGTTATGTGTTCTTGAGTCTCTCTTTCCAATTTCCATCAATCTAGGTCGTAATATTT GTTTCAAATCAAGGTGCACTGAGGATTAATGAATATGAAATACTAGGAATAGTGATTTGTAGAATGTTTAGTGGACTATCAGGTAACAAGAGTATCCGAG TCCACAGACGAGGCTTGTTGTTTAAATTATTGAGTGTTAAGTACAGGGCTGTTCCTGTGCTTGATTGATGAGTGTTATTGCTCTATTACTTCCGGCCTTT TCTTCTTGTTCTTTTTCTTCGGGTGAGAAGAGAGCAGTTTGGTTGAAGTTAGATTCTTTGGCTGAAACAACTATGAAGATGAAATAGTTATTCCATTTGA TGAGACCATCATTTTTGTACTCCTTTGCAAAGAGTTACATTACTTTATGTACACACCATAACTTGTCTTCTATTTAAAGTGAAAATAACTTTTTATTGTG TACATAAAGTGCAATAACTTCATCTTCTTTGCAGTGTATTGCATCTACCACCATAGACGAATACAGGCTTCATTTTGAAAAAGATAAGGCATTGGCACGA AGATTTCAACCTGTTTGGGTTGACGAGCCAAGTGAGGATGACGCAGTTAAGATACTTATGGGTCTACGCGAGAAATACGAGGCACATCACAAATGCAGAT TTACTGAAGATGCCATAAAGGCTGCAGTTAATTTGTCATCAAGATACATATGTGATAGGTATCTACCTGATAAAGCGATTGACCTCATTGATGAAGCAGG AAGTAGAGCTCATATTGACGACTTTAAGAGGAAAAAGGAACTAGACAATTGCGTACTTTTGAAGAGCCCCACTGATTACTGGCAAGAAATTAGGGATGTC CAGGCCATGCATGAAATGGAGAGCAAACTTAAATACTATGGCACTTCTAGCATTGATGATACTAGTGAACTTATAGTGGACTCATATTTACCTTCTGAAG CCAATGATAACGAACCTGTAGTAGTTGGACCAGAAGATATAGCAACTGTTGCTTCCATTTGGTCAGGAATTCCTGTTCAGCAGCTCTCTGTTGATCAAAG AACTCTGCTCCTAGATCTTAATAATCAACTTCGCAAACGTGTGATTGGACAAGACGAGGCTGTTCTTGCCATTTCTCGAGCCGTGAAGAGATCACGGGTT GGCCTTAAGGATCCTGATAGACCCATAGCTGCAATGCTATTCTGTGGCCCAACTGGGGTTGGGAAAACTGAACTTGCAAAATCTTTGGCGGCATGCTACT TCGGATCAGAGGCTGCCATGATAAGATTAGACATGAGTGAATATATGGAACGGCATACCGTGAGCAAATTGATAGGATCACCCCCAGGTTATGTTGGTTA TGGAGAGGGGGGCATTTTAACCGAAGCTATTAGAAGAAAACCATTCACACTGTTATTGCTTGATGAAATAGAGAAAGCTCATCCGGATATATTCAACATT CTTCTTCAATTGTTAGAAGATGGGCAGCTTACGGATTCTCAGGGTAGAAAAGTTTCATTTAAAAATGCATTGGTAGTGATGACTTCGAATGTGGGGTCTA GTGCCATTTCGAAGGGCCGGCACAACTCCATAGGGTTCTTGATTTCAGATGACAAGTCTACATCTTATAATGGCATGAAATCAATGGTAATGGAAGAACT GAGGACATATTTTCGCCCAGAATTGCTTAACAGAATAGATGAAGTGGTAGTGTTTAAACCTCTTGAAAAGTCACAGGTTTGTGAATTTTGGTTATAAGTT AGCTCCATGATGATAATCATCTAGAAGAGTCTTCCTCAGTATCATATTGAGCTATTTTTCTTTAGTCTATAACTTGATTTCTTCACATAAACTAATTTTT TAACTATACCAGGTAGAAGTAGAACTAATCTCTTTGCGTAGAAGTAGAACTAATCTCTTTGCAATTGATAAACTAGGTGACAATTTTTGGTACTAGTAAT TCAAATTGTGGACAGCATGACATGACATGATGCGGCTGCAATATTGTGGTTGCAGGGGTCACCAACCACATCACACCATAATTGCGGTGTAACACCGAAT CACAATTATGTAGCCCATTAGGCCGCAATGCAACTACATTGGATCGCATTTGGGCTGTATCATGCTACAACGCAACCACATCTGGCCGCATCAATTTCAA AAATAATTTTTTAATCACAGAATAATTTACATTGTAACTACTTCAATCTGCATCGCAACGGCTTTAATGACTGCAATGCGCCAGTGATTCAAATTATGGA CAACACATGATGCAGCTACAATATTGTGGCTATTGTGGTCATCACAACTACATCATACCGCAATTGCGGTGTGACACCGAAACACAATCATGGGCAATGC AATCGCATCAGGTTGCATTTAGGCTGCATCGTGCCACAACACAACCACATCTGGCCACATTAGACCGCATTGATTTCAAAAATAATTTTTTTAATCGCAG AATAATTTACACTGTAACATTGCAATATGCATTGCAAAGACCATAATGATTGCAATGCAATAACCGTGACCGTAATTACCACCGCAACTGTAATTTAAAA CACTGGTAGATAAATTAATGTGTTTTATTCATTCATTGATTTTGTTACTTTTATTACAGTTGCTCCAAATATTGGATATGCTGCTTCAAGACCTAAAGAA AAGGGTCATGACCCTAGGAATTGATTTAAAGGTGTCAGAATCAGTTAAGAACCTTGTATGCCAACAAGGTTATAACCCAACATATGGTGCCAGGCCTTTA AGGAGGGCTATTACATCAATAATTGAAGACCCCTTGAGTGAAGCATTCTTAGTTGGAAAGTGCAAGCAAGGTGACACTGTCTTCATTGATTTGGATTCCA ATGGTAACACCATTGTTACAAATAATATTGATCAGATTGTGAACTTATCTGATACAAATCATCCATGTAATTAACAATTGTATAGAAGTAGTATGATAGG TATACATATATAATTACACATGTATTGAAGTTGTTTTGGCCCTTGAAGCTAGCTTAGGAAGTTTATATAATGTAATTAGCTCATCCATCATTCTTTGAAA TTTATGAAAATATATCCATATTCTCTTATCTTGC BLAST
Tissuepods
Gene nameLI_gene_143669; 
Additional informationdetails; 

Expression of Ll_transcript_366132

Labels

PAB abscising pods
PNAB non-abscising pods
PS1 seeds stages 1-3
PS2 seeds stages 4-6
PS3 seeds stages 7-8
PW1 pods wall stages 1-3
PW2 pods wall stages 4-6
PW3 pods wall stages 7-8

Annotations of Ll_transcript_366132
BlastpChaperone protein ClpD, chloroplastic from Arabidopsis with 64.64% of identity
BlastxChaperone protein ClpD, chloroplastic from Arabidopsis with 72.88% of identity
EggnogATP-dependent CLP protease ATP-binding subunit(COG0542)
KeggLink to kegg annotations (AT5G51070)
CantataDB-
Mirbase-
Ncbi proteinLink to NCBI protein (XP_019429737.1)
PfamClp amino terminal domain, pathogenicity island component (PF02861.19)
Rfam-
GOLinks to GO: General; Genes and gene products; Annotations; Ontology;
Links to GO: General; Genes and gene products; Annotations; Ontology;