Ll_transcript_366135

Id TrinityTRINITY_DN46309_c5_g1_i5
Name TranscriptLl_transcript_366135
SequenceTGACTTTTTTGGCTTCCCTTTCTCATTTTCCTATTTTTGAAAATCTCATTATTGCTTTCTCATTCATCAAAACTACTTTCATTAGTTATATGTATCTTCC AAGCAACAAAAACAAAACTTGTCTTTTGTTCTCAATAACGTGTCCACCATTCTCACTTCATTCCTTCCTTCATTCCCCTTTCTTCTTCCTTCTCCTCAAC TCTTCAAACAAAACACATATTTATTCTTTCTTCATTTTTAAACACTGAAACCCAAACCCATAACCCTTTCTTCTCTCTCTCTTTCTATAACCATGCAAGT TTCATATTCCTCAATGAACTCATGGCTCAAAACACGTGTTCCATTGGAACCATGTTCTACTACTTCCACAACGTTATTTACACCTATCTCGTACTCAACA TGTATTAATGTTTTACATTCACCCCAGTATAAGAATAATAACTGTGTTTCGTTTCTGGTATCTCAAAGAAAAGGTTTTACTACTTTGACCCCAGTTTCAC CGATGAAAAAAATGAGCCGAAAAAGAAGATTTTTCACTGTTTCTGCATTATTTGAACGGTTCACGGAAAGAGCAATTAAAGCAATCATGTTTTCTCAAAG GGAAGCGAAATCTCTTGGTAGTGATTTGGTTTATACGCAGCATCTTTTGTTGGGTCTTATATCTGAAGAAGATCGTTCACTTGATGGTTTTCTTTCATCT GGTGTTACTATTGATAAGGCACGTGATGCTGTTCGTAGCATTTGGCACCAAAATGATAATTCGACAAGTGGTGATGGTGATGGTGATGATGATGGTCGAA GAAGTTATGTTTCTGCATCACATATTCCGTTTTCGATTAGCTCGAAGCGCGTGTTTGAGGCTGCTGTGGAGTATTCTAAGTCTCTGGGGCATAAGTTTAT TGCCCCAGAGCATATTTTAGTTGCTTTAGTCAAAGTTGATGATGGAAGTGCAACCCGAGTTCTTTACAGATTAGGGACAAATGCAAGTCAGTTGGCAGTT GTGGCATTCTCCAGACTACAAAAGGAGATTGCTAAAGATGGTAGAGAACCGAATATGGTGTCCAATGGGGTGCATAACAAATCCGTTTCAAGAAAAGGTT CCGATGCAGGATCCTCTGCCACAACAAAAGAGATGAGTGCCCTGTCACAGTTCTGTGTGGATCTCACTGAACGTGCGAGCGAAGGGCTAGTCGATCCAGT CATCGGCCGAGAAGTTGAAGTTCAGAGAATTATTCAAATACTAGGCCGGAAAACAAAAAGCAATCCCATTCTTCTTGGTGAAAGTGGTGTCGGAAAAACA GCTATTGCGGAGGGGCTGGCAATTCATATTGCTCGGGCGGATATTGCTCCTTTTTTATTGACAAAGCGTATCATGTCGTTGGATGTTGCAATGTTAATGG CTGGGGCAAAAGAGAGGGGAGAACTAGAGGAACGAGTTACGAAATTAATAAAAGAGATAATAAAGTCAGGTGATGTCATTCTTTTCATTGACGAAGTTCA TACACTTGTTCAATCAGGGACAAGTGGGAAAGGAAATAAGGGATCTGGCCTTGACATTTCTAATTTACTTAAACCTGCACTTGGAAGGGGTCAATTTCAG TGTATTGCATCTACCACCATAGACGAATACAGGCTTCATTTTGAAAAAGATAAGGCATTGGCACGAAGATTTCAACCTGTTTGGGTTGACGAGCCAAGTG AGGATGACGCAGTTAAGATACTTATGGGTCTACGCGAGAAATACGAGGCACATCACAAATGCAGATTTACTGAAGATGCCATAAAGGCTGCAGTTAATTT GTCATCAAGATACATATGTGATAGGTATCTACCTGATAAAGCGATTGACCTCATTGATGAAGCAGGAAGTAGAGCTCATATTGACGACTTTAAGAGGAAA AAGGAACTAGACAATTGCGTACTTTTGAAGAGCCCCACTGATTACTGGCAAGAAATTAGGGATGTCCAGGCCATGCATGAAATGGAGAGCAAACTTAAAT ACTATGGCACTTCTAGCATTGATGATACTAGTGAACTTATAGTGGACTCATATTTACCTTCTGAAGCCAATGATAACGAACCTGTAGTAGTTGGACCAGA AGATATAGCAACTGTTGCTTCCATTTGGTCAGGAATTCCTGTTCAGCAGCTCTCTGTTGATCAAAGAACTCTGCTCCTAGATCTTAATAATCAACTTCGC AAACGTGTGATTGGACAAGACGAGGCTGTTCTTGCCATTTCTCGAGCCGTGAAGAGATCACGGGTTGGCCTTAAGGATCCTGATAGACCCATAGCTGCAA TGCTATTCTGTGGCCCAACTGGGGTTGGGAAAACTGAACTTGCAAAATCTTTGGCGGCATGCTACTTCGGATCAGTAAGATTTTACACATAATATATGAT TTAGCATTAACAATTAGAAAGTGTTCTTTTTGTAAAAAATGAGGACCATTTCCCCCCTGCTTTTACATAATATGCATCTATTTGGTTGGAATGCTGATGT GAAATTAAACCCTTTAGAAATCTACTATTTTGTAATGAAAATTGAATTGGGGATAATTTTGTAGGAAAAGTTACACATTACAAGGATTTAAATATAAAAG TATAAAATAACAATACCTAGACTATTAATGATATCGGCAATATAATTCAGTTCACCTTATGGAGTAGTTTTTTTTCCTCGCTGTTAGGGTCCAATCATAA GGTATATCACATGAGTGCCACATCGGAAGGATGTGATTTTTGTATGGGTTTATACGGCCTTCTGCTCTTGAACCCTAAGGCCTAGCTTTTGTGGTATGGT TTTCAGAACGTCTATATCAATTGGTATCAGACCTTTTCCGCCGAGTCTATTGATTGCAAACACGATGGTGATGTTAGCATTGCCTATTTGCCCAAGACTA GTCGGAGAGCTAGTGCGCCACCAGCTTGTGTGGGCAAGTTGGCCGATGTTCATGACTTATTGTTATCAATGATCACCTGAACAGGAATGGAAGGACCACA TATTTCCTGTTGCTTTTCTTCTTTGTTTTTTTGGACTACAATGATTATGCTATGGTTGATGCATGCCACATTAATTGTTTATATATAGTTTTTCTTATTA TTATTACTATTTTCAGGAGGCTGCCATGATAAGATTAGACATGAGTGAATATATGGAACGGCATACCGTGAGCAAATTGATAGGATCACCCCCAGGTTAT GTTGGTTATGGAGAGGGGGGCATTTTAACCGAAGCTATTAGAAGAAAACCATTCACACTGTTATTGCTTGATGAAATAGAGAAAGCTCATCCGGATATAT TCAACATTCTTCTTCAATTGTTAGAAGATGGGCAGCTTACGGATTCTCAGGGTAGAAAAGTTTCATTTAAAAATGCATTGGTAGTGATGACTTCGAATGT GGGGTCTAGTGCCATTTCGAAGGGCCGGCACAACTCCATAGGGTTCTTGATTTCAGATGACAAGTCTACATCTTATAATGGCATGAAATCAATGGTAATG GAAGAACTGAGGACATATTTTCGCCCAGAATTGCTTAACAGAATAGATGAAGTGGTAGTGTTTAAACCTCTTGAAAAGTCACAGGTTTGTGAATTTTGGT TATAAGTTAGCTCCATGATGATAATCATCTAGAAGAGTCTTCCTCAGTATCATATTGAGCTATTTTTCTTTAGTCTATAACTTGATTTCTTCACATAAAC TAATTTTTTAACTATACCAGGTAGAAGTAGAACTAATCTCTTTGCGTAGAAGTAGAACTAATCTCTTTGCAATTGATAAACTAGGTGACAATTTTTGGTA CTAGTAATTCAAATTGTGGACAGCATGACATGACATGATGCGGCTGCAATATTGTGGTTGCAGGGGTCACCAACCACATCACACCATAATTGCGGTGTAA CACCGAATCACAATTATGTAGCCCATTAGGCCGCAATGCAACTACATTGGATCGCATTTGGGCTGTATCATGCTACAACGCAACCACATCTGGCCGCATC AATTTCAAAAATAATTTTTTAATCACAGAATAATTTACATTGTAACTACTTCAATCTGCATCGCAACGGCTTTAATGACTGCAATGCGCCAGTGATTCAA ATTATGGACAACACATGATGCAGCTACAATATTGTGGCTATTGTGGTCATCACAACTACATCATACCGCAATTGCGGTGTGACACCGAAACACAATCATG GGCAATGCAATCGCATCAGGTTGCATTTAGGCTGCATCGTGCCACAACACAACCACATCTGGCCACATTAGACCGCATTGATTTCAAAAATAATTTTTTT AATCGCAGAATAATTTACACTGTAACATTGCAATATGCATTGCAAAGACCATAATGATTGCAATGCAATAACCGTGACCGTAATTACCACCGCAACTGTA ATTTAAAACACTGGTAGATAAATTAATGTGTTTTATTCATTCATTGATTTTGTTACTTTTATTACAGTTGCTCCAAATATTGGATATGCTGCTTCAAGAC CTAAAGAAAAGGGTCATGACCCTAGGAATTGATTTAAAGGTGTCAGAATCAGTTAAGAACCTTGTATGCCAACAAGGTTATAACCCAACATATGGTGCCA GGCCTTTAAGGAGGGCTATTACATCAATAATTGAAGACCCCTTGAGTGAAGCATTCTTAGTTGGAAAGTGCAAGCAAGGTGACACTGTCTTCATTGATTT GGATTCCAATGGTAACACCATTGTTACAAATAATATTGATCAGATTGTGAACTTATCTGATACAAATCATCCATGTAATTAACAATTGTATAGAAGTAGT ATGATAGGTATACATATATAATTACACATGTATTGAAGTTGTTTTGGCCCTTGAAGCTAGCTTAGGAAGTTTATATAATGTAATTAGCTCATCCATCATT CTTTGAAATTTATGAAAATATATCCATATTCTCTTATCTTGC BLAST
Tissuepods
Gene nameLI_gene_143669; 
Additional informationdetails; 

Expression of Ll_transcript_366135

Labels

PAB abscising pods
PNAB non-abscising pods
PS1 seeds stages 1-3
PS2 seeds stages 4-6
PS3 seeds stages 7-8
PW1 pods wall stages 1-3
PW2 pods wall stages 4-6
PW3 pods wall stages 7-8

Annotations of Ll_transcript_366135
BlastpChaperone protein ClpD, chloroplastic from Arabidopsis with 67.24% of identity
BlastxChaperone protein ClpD, chloroplastic from Arabidopsis with 67.08% of identity
EggnogATP-dependent CLP protease ATP-binding subunit(COG0542)
KeggLink to kegg annotations (AT5G51070)
CantataDB-
Mirbase-
Ncbi proteinLink to NCBI protein (XP_019429737.1)
PfamClp amino terminal domain, pathogenicity island component (PF02861.19)
Rfam-
GOLinks to GO: General; Genes and gene products; Annotations; Ontology;
Links to GO: General; Genes and gene products; Annotations; Ontology;