Ll_transcript_366140

• Id Trinity: TRINITY_DN46309_c5_g1_i9
• Name Transcript: Ll_transcript_366140
• Sequence: TGACTTTTTTGGCTTCCCTTTCTCATTTTCCTATTTTTGAAAATCTCATTATTGCTTTCTCATTCATCAAAACTACTTTCATTAGTTATATGTATCTTCC AAGCAACAAAAACAAAACTTGTCTTTTGTTCTCAATAACGTGTCCACCATTCTCACTTCATTCCTTCCTTCATTCCCCTTTCTTCTTCCTTCTCCTCAAC TCTTCAAACAAAACACATATTTATTCTTTCTTCATTTTTAAACACTGAAACCCAAACCCATAACCCTTTCTTCTCTCTCTCTTTCTATAACCATGCAAGT TTCATATTCCTCAATGAACTCATGGCTCAAAACACGTGTTCCATTGGAACCATGTTCTACTACTTCCACAACGTTATTTACACCTATCTCGTACTCAACA TGTATTAATGTTTTACATTCACCCCAGTATAAGAATAATAACTGTGTTTCGTTTCTGGTATCTCAAAGAAAAGGTTTTACTACTTTGACCCCAGTTTCAC CGATGAAAAAAATGAGCCGAAAAAGAAGATTTTTCACTGTTTCTGCATTATTTGAACGGTTCACGGAAAGAGCAATTAAAGCAATCATGTTTTCTCAAAG GGAAGCGAAATCTCTTGGTAGTGATTTGGTTTATACGCAGCATCTTTTGTTGGGTCTTATATCTGAAGAAGATCGTTCACTTGATGGTTTTCTTTCATCT GGTGTTACTATTGATAAGGCACGTGATGCTGTTCGTAGCATTTGGCACCAAAATGATAATTCGACAAGTGGTGATGGTGATGGTGATGATGATGGTCGAA GAAGTTATGTTTCTGCATCACATATTCCGTTTTCGATTAGCTCGAAGCGCGTGTTTGAGGCTGCTGTGGAGTATTCTAAGTCTCTGGGGCATAAGTTTAT TGCCCCAGAGCATATTTTAGTTGCTTTAGTCAAAGTTGATGATGGAAGTGCAACCCGAGTTCTTTACAGATTAGGGACAAATGCAAGTCAGTTGGCAGTT GTGGCATTCTCCAGACTACAAAAGGAGATTGCTAAAGATGGTAGAGAACCGAATATGGTGTCCAATGGGGTGCATAACAAATCCGTTTCAAGAAAAGGTT CCGATGCAGGATCCTCTGCCACAACAAAAGAGATGAGTGCCCTGTCACAGTTCTGTGTGGATCTCACTGAACGTGCGAGCGAAGGGCTAGTCGATCCAGT CATCGGCCGAGAAGTTGAAGTTCAGAGAATTATTCAAATACTAGGCCGGAAAACAAAAAGCAATCCCATTCTTCTTGGTGAAAGTGGTGTCGGAAAAACA GCTATTGCGGAGGGGCTGGCAATTCATATTGCTCGGGCGGATATTGCTCCTTTTTTATTGACAAAGCGTATCATGTCGTTGGATGTTGCAATGTTAATGG CTGGGGCAAAAGAGAGGGGAGAACTAGAGGAACGAGTTACGAAATTAATAAAAGAGATAATAAAGTCAGGTGATGTCATTCTTTTCATTGACGAAGTTCA TACACTTGTTCAATCAGGGACAAGTGGGAAAGGAAATAAGGGATCTGGCCTTGACATTTCTAATTTACTTAAACCTGCACTTGGAAGGGGTCAATTTCAG TGTATTGCATCTACCACCATAGACGAATACAGGCTTCATTTTGAAAAAGATAAGGCATTGGCACGAAGATTTCAACCTGTTTGGGTTGACGAGCCAAGTG AGGATGACGCAGTTAAGATACTTATGGGTCTACGCGAGAAATACGAGGCACATCACAAATGCAGATTTACTGAAGATGCCATAAAGGCTGCAGTTAATTT GTCATCAAGATACATATGTGATAGGTATCTACCTGATAAAGCGATTGACCTCATTGATGAAGCAGGAAGTAGAGCTCATATTGACGACTTTAAGAGGAAA AAGGAACTAGACAATTGCGTACTTTTGAAGAGCCCCACTGATTACTGGCAAGAAATTAGGGATGTCCAGGCCATGCATGAAATGGAGAGCAAACTTAAAT ACTATGGCACTTCTAGCATTGATGATACTAGTGAACTTATAGTGGACTCATATTTACCTTCTGAAGCCAATGATAACGAACCTGTAGTAGTTGGACCAGA AGATATAGCAACTGTTGCTTCCATTTGGTCAGGAATTCCTGTTCAGCAGCTCTCTGTTGATCAAAGAACTCTGCTCCTAGATCTTAATAATCAACTTCGC AAACGTGTGATTGGACAAGACGAGGCTGTTCTTGCCATTTCTCGAGCCGTGAAGAGATCACGGGTTGGCCTTAAGGATCCTGATAGACCCATAGCTGCAA TGCTATTCTGTGGCCCAACTGGGGTTGGGAAAACTGAACTTGCAAAATCTTTGGCGGCATGCTACTTCGGATCAGAGGCTGCCATGATAAGATTAGACAT GAGTGAATATATGGAACGGCATACCGTGAGCAAATTGATAGGATCACCCCCAGGTTATGTTGGTTATGGAGAGGGGGGCATTTTAACCGAAGCTATTAGA AGAAAACCATTCACACTGTTATTGCTTGATGAAATAGAGAAAGCTCATCCGGATATATTCAACATTCTTCTTCAATTGTTAGAAGATGGGCAGCTTACGG ATTCTCAGGGTAGAAAAGTTTCATTTAAAAATGCATTGGTAGTGATGACTTCGAATGTGGGGTCTAGTGCCATTTCGAAGGGCCGGCACAACTCCATAGG GTTCTTGATTTCAGATGACAAGTCTACATCTTATAATGGCATGAAATCAATGGTAATGGAAGAACTGAGGACATATTTTCGCCCAGAATTGCTTAACAGA ATAGATGAAGTGGTAGTGTTTAAACCTCTTGAAAAGTCACAGTTGCTCCAAATATTGGATATGCTGCTTCAAGACCTAAAGAAAAGGGTCATGACCCTAG GAATTGATTTAAAGGTGTCAGAATCAGTTAAGAACCTTGTATGCCAACAAGGTTA
• Tissue: pods
• Gene name: LI_gene_143669;
• Additional information: details;

Expression of Ll_transcript_366140

FPKM

• PAB: 92.3
• PNAB: 4.3
• PS1: 4.7
• PS2: 1.6
• PS3: 4.3
• PW1: 7.4
• PW2: 7
• PW3: 9.6

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_366140

• Blastp: Chaperone protein ClpD, chloroplastic from Arabidopsis with 68.51% of identity
• Blastx: Chaperone protein ClpD, chloroplastic from Arabidopsis with 68.39% of identity
• Eggnog: ATP-dependent CLP protease ATP-binding subunit(COG0542)
• Kegg: Link to kegg annotations (AT5G51070)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019429737.1)
• Pfam: Clp amino terminal domain, pathogenicity island component (PF02861.19)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;