Ll_transcript_364702

• Id Trinity: TRINITY_DN46314_c1_g1_i4
• Name Transcript: Ll_transcript_364702
• Sequence: CCAAAACCACACGTCGTCGTTTCATTTCATTTTCATTCTTCTCAACACACACATTCTCTCTCTCTCTGCGTTTTGGAGCTTAGTAGTGTCGTTTTTCAGA TCAGAGTTTTCTCGCCATGAACGGAAACAAAGCTATGGAAGACGCCAACGTTGAAGTGATAGAGTGCAACGAAAAAATGGTGTACATGTGGGGATACCTT CCCGGAGCTTCATCGGAGAAGATTCCGATACTCTCTCCGACGCAAGTTACGCTCTCTCTGCCTTCAGATTCGTGGAAAGATGTGTGCGGAGGTGGCTGTG GATTCGCTATGGCAATCTCAGAGAAAGGGAAGCTCATAACGTGGGGTTCTGCGGATGATGAAGGCCAAAGCTATTTGGCTTCAGGGAAGCATGGGGATAT TCCAGGGCCTGTTCAGCTTCCCACTGAGGCTTCAGTGGTAAAGGCTGCTGCTGGTTGGGCTCATTGCGCCTCTGTTACCGAAGAAGGTGAAGTATATTCA TGGGGCTGGAAAGAATGTGTGCCTTCTGGAAAAGTTATTATTGATTTCACTACTGGGGGAAGCCTGCAAAAGGATGTTGCTGGGAAACAAAGCTCACCAG TAGCTGAACAAGGAAGCCCACAAAGCTCAAACACTAGTAGCGGGTCGGATTCTCATCATGATAACAAGAAAGTTGGAGCAGATGTTGTGAAGAGAAGGAA GATCTCATTTGCCAGACCGGAATCTGACAGTCCAGCATCTGGAGATGAATTCTTTACTATGTCCCCTTCTCTTGCTACCCTTGGTCATGGGGTGAAAATT ACCTCCGTTGCAGCTGGTGGGCGTCATACCTTGGCTCTGTCAGGTTCTATGAAGTACGAAGATATCGAAGGTTTTTGATGTAATGCAAGACACATGATGC ATCATAATTTTTACCAAAGTTTTCAGATGTGGGACAGGTCTGGGGTTGGGGCTATGGAGGCGAAGGACAGCTAGGTTTGGGTTCTCGTGTAAAGATGGTA TCATCTCCTCATCTCATACCTTGTATTGAGTCAGCTGCTGGGAAGGATAGGTCATCAACTTTTCAGCAAGAAAGCAGTGTGGGAGCTCAAGTTTCAAAGG TTCCTGGAAGTTATGTTAAGGAAATTGCTTGTGGAGGTCGGCATAGTGCTGTGGTTACAGATGCCGGAGCTCTTCTTACTTTTGGCTGGGGTCTCTATGG CCAGTGTGGGCAAGGGAATAATGCTGATCAGCTGAGACCAACTCTAGTTCCTTTGTTATTGGGAACTGATGTGGGAAAAATTGCTGCGGGACTTTGGCAC ACATTGTGTGTTACAGAAGATGGTCAAATCTATGCATTTGGTGGGAATCAGTTTGGACAATTGGGTACTGGTAGTGACCAGACTGAGACTTCACCTAGAC AGTTGGAG
• Tissue: pods
• Gene name: LI_gene_143709;
• Additional information: details;

Expression of Ll_transcript_364702

FPKM

• PAB: 2.8
• PNAB: 5.4
• PS1: 3.1
• PS2: 3
• PS3: 2.8
• PW1: 0.7
• PW2: 4.2
• PW3: 3.1

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_364702

• Blastp: RCC1 and BTB domain-containing protein 2 from Mus with 30.77% of identity
• Blastx: E3 ISG15--protein ligase HERC5 from Homo with 45.26% of identity
• Eggnog: regulator of chromosome condensation(COG5184)
• Kegg: Link to kegg annotations (105670)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019460943.1)
• Pfam: Regulator of chromosome condensation (RCC1) repeat (PF13540.5)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;