Ll_transcript_364704

• Id Trinity: TRINITY_DN46314_c1_g1_i6
• Name Transcript: Ll_transcript_364704
• Sequence: CCAAAACCACACGTCGTCGTTTCATTTCATTTTCATTCTTCTCAACACACACATTCTCTCTCTCTCTGCGTTTTGGAGCTTAGTAGTGTCGTTTTTCAGA TCAGAGTTTTCTCGCCATGAACGGAAACAAAGCTATGGAAGACGCCAACGTTGAAGTGATAGAGTGCAACGAAAAAATGGTGTACATGTGGGGATACCTT CCCGGAGCTTCATCGGAGAAGATTCCGATACTCTCTCCGACGCAAGTTACGCTCTCTCTGCCTTCAGATTCGTGGAAAGATGTGTGCGGAGGTGGCTGTG GATTCGCTATGGCAATCTCAGAGAAAGGGAAGCTCATAACGTGGGGTTCTGCGGATGATGAAGGCCAAAGCTATTTGGCTTCAGGGAAGCATGGGGATAT TCCAGGGCCTGTTCAGCTTCCCACTGAGGCTTCAGTGGTAAAGGCTGCTGCTGGTTGGGCTCATTGCGCCTCTGTTACCGAAGAAGGTGAAGTATATTCA TGGGGCTGGAAAGAATGTGTGCCTTCTGGAAAAGTTATTATTGATTTCACTACTGGGGGAAGCCTGCAAAAGGATGTTGCTGGGAAACAAAGCTCACCAG TAGCTGAACAAGGAAGCCCACAAAGCTCAAACACTAGTAGCGGGTCGGATTCTCATCATGATAACAAGAAAGTTGGAGCAGATGTTGTGAAGAGAAGGAA GATCTCATTTGCCAGACCGGAATCTGACAGTCCAGCATCTGGAGATGAATTCTTTACTATGTCCCCTTCTCTTGCTACCCTTGGTCATGGGGTGAAAATT ACCTCCGTTGCAGCTGGTGGGCGTCATACCTTGGCTCTGTCAGGTTCTATGAAGTACGAAGATATCGAAGGTTTTTGATGTAATGCAAGACACATGATGC ATCATAATTTTTACCAAAGTTTTCAGATGTGGGACAGGTCTGGGGTTGGGGCTATGGAGGCGAAGGACAGCTAGGTTTGGGTTCTCGTGTAAAGATGGTA TCATCTCCTCATCTCATACCTTGTATTGAGTCAGCTGCTGGGAAGGATAGGTCATCAACTTTTCAGCAAGAAAGCAGTGTGGGAGCTCAAGTTTCAAAGG TTCCTGGAAGTTATGTTAAGGAAATTGCTTGTGGAGGTCGGCATAGTGCTGTGGTTACAGATGCCGGAGCTCTTCTTACTTTTGGCTGGGGTCTCTATGG CCAGGTGAGTTTCCTGTTGACAAATTCTTTTTTTATATTTTTCATCTTCTGTTAGGGGAAAGACATTTATTTTTATTGCTATGGTTAAGTTGGAAATTGA TCTTGCTGAAAACTCCAGTAGTGAAAATGGAATTTGTGATGCCTATTATTTATCATAAGTATTGTCTAAAGATGAAGAAGTCCCCTTAAAGATTTTAGCA TTCCTTTTCCAACCAAAGGCACCAGAATGCAGCAGATGCAGCATACTGCCAAAAAATTAGCTCCTTCTCAAAAGCCCTAACCTCTAAGTTTAATATGGAG AAGCTGATGCAATTCCTTAGGGCAAACTCAATCATGTCCATAGATTCTAAAAAGCTTAATCTAAAGAAAATTCCAAGAACAAGAATGCAAAAGAAGGTAG TTTCATTTTCTGAACTTGAACAACACATTACACACATTAGGAGATAAAGCAGTGAAAGCTCTACTGTTTTGTAGCATGTCTTTAGTGTTAATGTTAAGAA TAAAAGTCCAGACAAAATGTTTTGATCTAAATAGAAGCTTTGGACATTTAGATCCAAGTCTTTTTGAGGAAATAGTAGAACTACCAAGTACCAACCAAGT CTTATTCTCACTAGTTGGGGTTAGTTGCATGGATCAAGCAATGCTATTAATATAAGCTTTATTCCCACTAGACGGGGTCGGCTACACATTATAAATATAA TGCTTTATTATAAATTATTTTCATTTACAAAGTTTATCTCTAAATCTTAATTGTTCCGCATATGGTTTTTCTTGTTTTTCCTATTTGAGATGTTACACCA CACATGTCTATAAAGATTTTGCTAAGTGCCAAATATTTTTTAAACCAAAAGGTTCCGATGAAGTTGGAGTTTCAGAAGTACCTTGGACTTCTCCTGACTT CAAGTGTTCCATTTCATTTTAAATGGCATATATGTTCTTATTAATGAATTTCTGAGGAGGAAGATTATCTCATTTAATGTTATGTATTGTTATGAAGCAC ATGTGTAGGAACCGTTTCTTTTAAACCTTTTTGCATGTAAATTTACTCCAGTGTGGGCAAGGGAATAATGCTGATCAGCTGAGACCAACTCTAGTTCCTT TGTTATTGGGAACTGATGTGGGAAAAATTGCTGCGGGACTTTGGCACACATTGTGTGTTACAGAAGATGGTCAAATCTATGCATTTGGTGGGAATCAGTT TGGACAATTGGGTACTGGTAGTGACCAGACTGAGACTTCACCTAGACAGTTGGAGGCTTCTCGTTTTGAGAATAAGCGTGCTAGTATAGTTTCTTGTGGA GCACGCCATAGTGCTTTGCTAACAGGTATGTTGCCATTAGAACTGAAGGGGAAAGTTTAAAGCCAATCTGACTGTGTATTTTGATGGTGCTATGACTTAT TAAAATTGAATAGACCAAAGATATTTGTGCCAAGAACCATTCTATGGGCTATGCAAATTTCACGACAATTTCAACTATGATGGACTGTGCACACAACTTG AAAGGGTAATTCCTTACCCATAGGGTGAGGGGATGCAAAAAAAGAATCGCATACTTTCAATGTGGGATTCAAGTCCAATACCTTGCAATTGGATCCTAGT ATCCCACCATGCTCTGCAACCCTGGCACCCATGCAGGCTGGCTGTGCACTAGCCCTTTGACTAGTCCCGGGCAAAAACTGCAATGCTGGCGTTGCCACCG GTGATGCTCTTCTCAGCCGTGAGATATGGTGGGTAGCTCTGATACCAATTGATAAGAAAACCTTGTGAGAGCCACACCACGAAAGATAGCCATCGTAGTT GGAGAGCCCAAGGCCTTATAAATCCCACACTATGGATTCAG
• Tissue: pods
• Gene name: LI_gene_143709;
• Additional information: details;

Expression of Ll_transcript_364704

FPKM

• PAB: 3.2
• PNAB: 2.5
• PS1: 2.2
• PS2: 1.8
• PS3: 1.7
• PW1: 1.7
• PW2: 1.4
• PW3: 1.2

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_364704

• Blastp: RCC1 and BTB domain-containing protein 2 from Mus with 30.77% of identity
• Blastx: RCC1 and BTB domain-containing protein 1 from Mus with 40.45% of identity
• Eggnog: regulator of chromosome condensation(COG5184)
• Kegg: Link to kegg annotations (105670)
• CantataDB: Link to cantataDB annotations (CNT0000795)
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019460943.1)
• Pfam: Regulator of chromosome condensation (RCC1) repeat (PF13540.5)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;