Ll_transcript_365172

Id TrinityTRINITY_DN46317_c3_g1_i21
Name TranscriptLl_transcript_365172
SequenceCTCTTTTCACCGTTCCATCTTAACTAACCGTTACACTTTTAAATTCCTTACCTAACATTTTAGGGTTTTTCTTTGTTTTTTTTATGTTTTTCTAATTACA GAGTGATATTCGAAAGTGGTTCATGAAGTCTCATGCCAAGGTCAATGACAGTGCTTCTAAGCCTTCTTCCGATGATAAAGTCCAGCCTCAGAAAACGGCG CCTGGAGCCGAAGAAAGTTCAGGTTCCGGGAGGAGGAAGACTAGTAAATATTTTGATAAAGACAAAGAAAAGGTGAAAGAAGAGAAAGAAACACCGAAGC TCCCTGCTAAAAGAAAGAATGTGAAAGACAGCGAGGAATTACAGATACCCCGCCCTTCAAAGAAAATTCATGAAGCGGATGAAGACAAGTCTGCCATGCC CACATCTTATAACAAGCTTGCTGACTCCACTCCTGCAAAAAAATTAAAGAGTGGATCAGGTAGGGGGACCCCCCAGAAATCTGCAGAGTTGGAAGAAAAT GATGAAGACGACGACAAAGATAATGTTACTCCAGCTAAATCTGGTGGTAGGGGTCGGGGTGGACGAGGGGCATCAACACCATCAACTGGTGGTCGGGGTA GAGGGGGTGGTAGGGGTGGATTTATGAATTTTGGTGAAAGAAAAGATCCTCCACATAAAGGAGAAAAGGAAGTCCCTGAAGGTGCTCCTACCTGTTTAGC TGGCTTAACTTTTGTGATCAGTGGAACACTGGACAGTTTGGAACGAGAAGAAGCCGAAGACTTGATTAAACGCCATGGTGGCCGTGTTACAGGATCAGTC AGCAAGAAAACAAGTTATCTGTTATGTGATGAAGACATTGGGGGACGGAAGTCTGAAAAAGCCAAAGAGCTTGGGACTTCCTTCCTCACAGAGGATGGAT TGTTTGATATAATTCGTGCATCAAAACCTGTTAAAGCTCCTTTGAAAGAAGAACCCAAGAAACCTCTGGCTAAGGCTGTTGCATTAGCATCCCAATCAAA AGGTCCTCCAAGAGTAGAAGCTAAGGTCTCTCTATCTTTGTCCTCGCCTTCTACCCAAGCCAAGCCAAAGACAGCAACTATTACTCAATCTTCTTCGACG TGGACAGATAAACATCGACCTAAAAGTCCTAAGGACATCATAGGGAATCAGTCACTTGTTTCACAGCTTCGAAATTGGTTGAAAGCATGGAATGAACAAT TCCTCGACACTGGTAGTAAAAAAGTAGGTAAAAAGCAAACTGGATCTGGTTCCCAAAAAGCTGTCTTGTTAAGTGGAACGCCTGGCATAGGAAAAACAAC TTCAGCAAAGTTGGTCTGTCAGGAGCTTGGTTTCCAAGCCATAGAGGTAAATGCTAGTGATAGCCGTGGAAAAGCTGATAGCAAAATTGGAAAAGGAATT AGTGGAAGCACTAAGAATTCTGTCAAGGAACTTGTAACCAATGAGTCCCTTGGTGCTAATATGGATCGGTCAAAGCTTTCTAAAACTGTGCTCATTATGG ACGAGGTTGATGGGATGTCAGCTGGTGATAGGGGTGGTGTTGCTGATCTTATTGCTAGCATCAAGATATCAAAAATTCCTATTATCTGCATTTGCAATGA CCGTTACAGCCAAAAACTAAAAAGTCTTGTGAACTACTGTTTGCTTCTTAGTTATCGAAAACCTACAAAGCAACAGGTATTTCTGTGCTTATCATTTACG AAAGAAATCATTTATCGTTTATGTAAAAGTTAAATCTTTATTCCAATTGACTCTTTTTCTGATAAAAGAGATTTTTCATTGCTTGCTTTTAATCCAGATC ATTATTGATTTTGAATTTATGGTTTTGATTAATTGGACTTGCTGATTTCTCGAATGTCATTAGCTCGAATGTGAACCTCCACATTGTCTAATTTTTGATA TTGGTGTTCCAGCTCCTACTTCATTGTGTGGCCCGCTTCACTAAATCTTGAATATTTTGAGGTTGCAAAGTATCTTGACTTTGGAATAGGGTCTTATTTT GAACGGTCTAGTCTATAAATTACTTCTAGTTTTGAAGGCAAGGTTAATTAATTCAAGTTATTTTCTGTCAAAATTCATGATTTGATTTGTTTTGACTGGG TTTTCTTCTATGATCAGTTAGTTTTGATTGTTAAAGTAATAAAATCAAATACACGAGAAAGTATGAACACATGTTTATCTGTCTATCTATGTATATGATC ATCACCATTTATGAATCTTGTTCGTAGGAGAGAGTATATACCATGAGGGTCGAGGTGGTCAATAGCACACTATAGCAGTTCGTGGTGTCATGACACATGG TCGTTTTGGCTGTTGCCTAATTGCAGCCTAATAGCATGCTTCACAAACACAATCGCTATGTGTGAATTCCCAATTTTGAAGTATTTTATTTTATATTTTA CATTCATAGCTCTTTTTAGAGGGTGAGCTTGACACAATGGTGAAGTTTCTGCTTAGTGACCATGAGGTCACTGATTTAAATTCTGGAAACAACCTCTCCA CTTGTGGGGGTAAGGTTGTGTACATCTACCCTCCCCAAATCCCACTAAATGGGAGCCTCATGTAATGGGCTGTCCTTTTATGGCTCTTTTCAATCTTTAA GAACTTTAAGAGTTAGAAATCCTTCTCTCTTTGACAGCCGACACACTCCAACACCTTGTTCCATTGATAAATCTCAGAACATCTAATGTTTCACACGTGG GTCAATTTTTTTTAATGATAAAAGAGAGATTACAAGAAGTGGACTAGACATCCTCACATAAAGAACACCGAAAAACTAAACAACAAGGCCATACAACAAC GCATGCCAGTCCCTCGGCACATCTACCAAAGAGGCACCACTAAAAAGGCCATGTGTAAAGCACAAATGGGATGACAAAAAGGTCACCCTATCCCAGACGA ATCAAGAGATGAGAATGAAACATTGAAAACTCTACTGTTTTTCCTTTCCAACTAAATAAACCAAAGGACATAAAAACCATAACACTCCCATAGAATTTCG GCATCTTTACGTGTGCCAAAACCTCTAAATTTTGCAAGAGAAAAGCATGCAAGTCCATTAGGCAGATCCATGACTCATCAAAAATCCCAGACAATCTATT TCAAAGGACATTTGCCGCCGAAGAATGTAAAAAGATATGAGGCCCATTTTCGAAGTCTGAACCACACATTATGCACATATTAGGAGACAAAGTGGTTAGC ACTTTAAACTTCTGAAGCATGCAATTGGTGTTAATCCTGTCAAGAACATGTCATTGCATCTACTATGTCCAGTACAGCTGCAGAGTTTTTAGAGTTGGCT GCTCCACGCCACTATCGTATGGCAAAGAGGCTGATGGATGTTGCAAAGGCTGAGGGGCTTCAAGTTAATGAGGTGAGTACATGATGTTATTACATAGTTC TTTCTGGAATTTTAACTGTAAATATTGTCTGGGCTCTGGACCGAGGATAGCGAACTACTTTGAATCATTGATACCTGTTTCTTACAAAACTGTAATTTTT TCCATTCATATTGACCAACCTCTTTTATTTAACCACTCATCTTGATTGTTTAAGATTGCTCTTGAGGAACTCGCAGAAAGAGTTAATGGAGATATGCGCA TGGCAATAAATCAGTTGCAATATATGAGCCTCTCCATGTCAGTTATTAACTTTGATGATATCAGGCAGCGCTTTCTTAAAAATTCAAAGGATGAAGATAT TTCGCCATTTACAGCTGTTGATAAGCTTTTTGGTTTTAATGCTGGGAAATTGAAAATGGATGAGAGGAATAATCTTAGCATGAGCGATCCTGATCTTGTT CCTCTTCTTATCCAGGAAAATTATATTAATTATAGACCAAGCGGGGCTGGTAAGGATGACAGTGGTATAACACGCATGAATCTGATTGCCCATGCTGCTG AGTCTATTGCTGATGGGGATATAGTGAATGTACAAATTCGAAGATATCAACAATGGCAGCTTTCTCAAACTAGTTCTGTCGTATCGTGTATAATTCCTGC TTCATTACTGCATGGGCAAAGGGAAATACTCGAACAGGGAGAACGGAATTTTAATCGGTTTGGTGGGTGGCTTGGGAAGAACTCGACAAGGGGTAAAAAC ATGAGACTTTTGGATGATCTTCATGGCCACATTCTTGCTTCTCGTGAAACTAGTCCGGGAAGGGATACTATACGCTTGGAATACCTGACTCTGCTTCTTC AACACCTGACAGAACCACTGAAAACCCTGCCCAAGGCTGAAGCTGTTGAGAAAGTTGTGGAATTTATGAATACATATTCTATCACTCAGGAAGATTTTGA CACTATTGTGGAGTTATCAAAATTCAAGGGTCATCCTAATCTTCTAGACGGCATACCACCCGCCGTCAAGTCAGCCTTGACAAAAGCATATAAGGAGCAA AGCAAATATCGGATGGTGCGAGCTGCAGATCAAGTCACTCTTCGGATGGTGCGAGGTTCAGATCGAGTCACTCTTCCTGAAATAAAGAAGGCCCCTAAGA AGCGGATTGCTGCTATTCTAGAACCAGCTGATGAAGGAATGGAACAAGGTGAAGGTGAAACCTTGGACGAGAGTGAAGATGAGAACACCTCTGACACTGA GGAGTTGGGCCCTACCGCTGGGGAGAAACTGCAGTCGGAACTTCAAAGCTTGAATTCAAAAGCCGTTCAAGTACAATTGGAGTTGAAGGGAACAGGCAAT TCGAGTTCGAAGAAGCCATCTGCTGGTAAAGGAAAAGGTGCTTCTGCATCTGCACAAAAGGCTGGCCAAACATCAAAAAGAAAAAGGTGAAGGAATATGC ACACTAATGGGAAGATTTGTATATGGACCTTGTTCTTCATGTAATTGATGTTAGGCATTTGTAATAATTTTTGGTTGACTTTTACTGAATTTTCCAAGGA GAGTACCGAGAAACATGGATTGGTTGTGTTTTTTTTAATGGAACATGGGTTGTACATGACGATGATCCCTGCTAATTTGGGCAACATATCTCATCGCTGA TTGAGCTGCAAACTTCCCTGTGGGACATATTGCGAGCAAATTCCAAATTATCACTATCTCCACTCTTCATAACAAAGGTGTGTGTCCGTGTGAAACTATT CTAAGGTATATAAAACTATTCAAAGTTCTCAATAAAAAAAAAAAAAAA BLAST
Tissuepods
Gene nameLI_gene_143740; 
Additional informationdetails; 

Expression of Ll_transcript_365172

Labels

PAB abscising pods
PNAB non-abscising pods
PS1 seeds stages 1-3
PS2 seeds stages 4-6
PS3 seeds stages 7-8
PW1 pods wall stages 1-3
PW2 pods wall stages 4-6
PW3 pods wall stages 7-8

Annotations of Ll_transcript_365172
BlastpReplication factor C subunit 1 from Arabidopsis with 65.67% of identity
BlastxReplication factor C subunit 1 from Arabidopsis with 65.93% of identity
Eggnogreplication factor c(COG5275)
KeggLink to kegg annotations (AT5G22010)
CantataDB-
Mirbase-
Ncbi proteinLink to NCBI protein (XP_019413096.1)
PfamBRCA1 C Terminus (BRCT) domain (PF00533.25)
Rfam-
GOLinks to GO: General; Genes and gene products; Annotations; Ontology;
Links to GO: General; Genes and gene products; Annotations; Ontology;