Ll_transcript_365329

• Id Trinity: TRINITY_DN46318_c0_g1_i3
• Name Transcript: Ll_transcript_365329
• Sequence: AGGAAATCTCCTACTCTATGGGAAACATACTAATCTTTTTTTGTTGTGAATTGTATAAAGCCCATGAAGGCTTTGCTCTCTAGAATTAAATCTTTAACTT TTGGGCTAACATAATATCTGTATATCTAGTCGGACCTTATATAACTAGACCAATACCTCTCGTATGTTATTGTCTCTTACCTTACCTTGTTCTGTGTTTT TGACACTGAACCAAGTAGCATAATGAATCTGAGACCTTAACACATCGAACCGGTTTTTTCACTTTCCAAATCTCAAAACCCTTTATTCCCTTTTCTTCCA ATGCAAGACGACGAAGACGAGTTCGGTGATTTGTACGGTGACGTTCTCTTACCCTACACCGCACCCCTCTCTAATTCCGATGCACCCATTCTTTCCACCA ATCAAATCACTCTTCCTCTCCGCCCTGATTCGACCCGCGCCGCCGCCGAAGAGGAACCAGATGACCGAGCTAGGGTTCGTGATGGCGTCGCCGAAAGCGT TTCGAAATCAGAAGAAGATAGGACTTTGCTGGATTCGAAGAAGGAACTTGTTGCTGCCATTGATGGGGAAGGTGTTGATTTGCTGGATAAGGAAGTGAAA TTTGATATCGAAGACGATGATGATGGCAGCGGCGGTGGTGAAATTGGAGAGGTTGGTTCGGAATTGGTTATTCCAGGGCTATTGTATGAGGATGATGGCA GTGGTGGCGGCGGCGGTGGTCATGGAGGTGGTGGAGGCGTAGGTGACGGTGATGATTGGGATAGTGACAGTGATGATGATTTGAAGATAGTATTGAATGA CAATAACCATATGGCTGCAATGGAAAGAGGTGGAATAGTTGATGATAATGATAATGATGATGACGATGATGATGATGGTGAGCTTGTTATTGTGACGAAT GGTGATCCGAATCAAGGCGTGGAGGAACAAGAGTGGGTTGAGAATGCAGCACTACCTGTGGATGGTGAGAGGAAAGATGAAGGGGAGCCTGGAAAAACTG CTGTTAGCGGCAGTATGATTGTGGCACCGAAAGTTGGGTATAGCAGTCATGGTTATCATCCATTTCGGGCGCAGTTTAAGTATGTTAGGCCAGGTGCAGC ATCAATTCCAGGAGCTACTACTTCTGCTCCAGGAGGACCTCCTGGCCCGATTCGTCCACTTGTTAACATGGCTGGTCGTGGCCGAGGTGATTGGAGACCA CCTGGAATAAAAGGGGCTTCAATGCAAAACGTTTTTCATGCAGGACCTGGATTACCTGGTTGGGGCAATAGTGTAGCAGGCCGAGGTTTTGGTGGTGGAT TGGAATTCACTCTTCCTTCTCACAAGACAATATTTGATGTTGAAATTGAGAGTTTTGAGGAGAAACCATGGAAATATCCAAATGTTGATGCATCGGATTT TTTCAACTTTGGCTTGAATGAGGACAGCTGGAAAGATTATTGCAAACAACTGGAGCAACTGCGCCTGGAGTCTACGATGCAAAGCAAGATCCGTGTTTAT GAGAGTGGTCGAAAAGAGCAGGATTATGATCCGGATCTGCCACCTGAATTAGCTGCAGCTACTGGTATACATGATGTAACTACTGAAAAGGCAAATTCTG CGAAGTTAAATGTCGGACAAAGTGGTGTCATGAAAGGTTCTGGGCACATGCGACCATCCCTACCAACTGGTAGAGCAATACAGGTAGAAAGTGGCTATGG TGAACGACTTCCTTCGATTGATACCCGCCCTCCTCGAAACCGTGATTCAGATGCGATCATTGAGATTGTTTTACAGGATACCGAAGATGATGGTTCTTCT GCAGGAAACTGTGTCCAAGATGAAGCGGAGGACGGAGAACCCCAGAGAGAGGATTTTAGAGAAGACCATGTAGCTGAACTTCCAAGGTTGGAGCCTGAGT ATTTTGATGGTTTTTCACGGGACTATAATGGTAGAAAGAAAGAGCTTGCAGGAAGAAGAGTGCCATTTATGAAATCCAGTCCTGCTAACATGCCTAACGG AGATGAAAATTTATTCTTCCCACAGGAAGAGCCATTTTCCTACTCTGGTTCTAGGGGCCCAAATCCGAGGTCCTATGGTGTCAATCTCAGCTCTTCTCAT GAAGAAAGTCGGATGCAGAAAAGAGTGCATGCTCAGTCTCCTCCTATTACTCCTATCCGAGAACTGACATCTGTTGATGATAAAAAAGAGGAGTCAGTTG AAAGCATGGAAGTCAGACATAGTGCACTTTCATCATCTCCTGTGATTAAGGATGCGAGGGAGTCCAGTGCGGAGAACAAAAATACTGAGCTTGAGGACTC TGTGGCAGCTGATGAAAGTTCCAGATTGGAAAAAGAAGAAATGAATTTAGATACAGTAGAAAAAGCAGATACCCTTGAGGATAGGAGACAAAAATTAACA CCTGAAGTTGAGCAACCTTTGCTTGATGAAGATGATGATCAAGAGGAGTCGAAGGCTGCAAGAGGCAGTGATAACAGCAAAGCAAGATCGTCAAGCAGCA GGGATAATCAGAAGCGGCCGGAAGGTTTTGAGGAAGAAGTAGTTCAGGATCCACGACCAGCACGACTAGGTACCATCAGACAGCACCCCGATGAAAATGA GCAGGAGCTCTATAGAAGAGAGCATGATAGAAAGCAAGAACTTGAAAGAAATCGCATGGTCCCTAAAGGTAGAGAGGGACCACACTCTTACAGGGATCGA CATCCTAACTCATCTCAACCATTGGCAACAAATATTGATGGGTTAGAGAGGCAAAAGCACAAGGACAATTCTGACATGGATTGGACACAAAGAGACGATC CCTATAACAGAAGGATTAGAAATGATGAATCTAGAAAGAGAGATCGGGCTAAGGTCCGAGAAAATGAGAGAAGCAACAAAGATGACAGCCTTCATTCTAG AAAACATTTGGATAATGGCAGCTACAGGGTTCCTTATGATAAGGATATTGGATCAAGAGATTCAAGACACAGGGAAAGGGATGAGGGCTTGAAGATTAGG TACGAAGCTGTGGAGGATTACCATAGCAAGAGAAGGAAGGATGAGGAATACCTTAGGAGGGAGTATATTGACAAAGAAGAAATTCTGCACAGCTACAGAG AAAATGCAAGTCGGCGCAGGCGGGAAAGAGATGAAGTATTGGACCCACAAAAGAGAGATGATCCAAAAAGAAGTAGAGATAATCTGGATGATCAATATGC CCCCAGGCAGAAAGATGACACCTGGCTACCGAGGGAAAGGGGTGATAGGCAGAGAGATAGAGAAGAGTGGCATCGGACGAAACAGTCCCATGAAGAACAT GTACCTAAGCGTGAACGAGAAGAAGGACAGAGTTCTGTAAGAAGTGGACGACGAGCTGAAGAAAAATCATGGGTTGGCCGTGTTAGGGCTAAGGATGAAC CCAAAGTTTCTGACAAGGAATACCAATCTAAAGAAGCAATGCGACACAATGACCAATTGAAGAGGAGAGGTCGGATTCAGGATGAAAGTTCACATCACAA GGGTCGCGATGATGCTTATGCCCGTGGAAATCAATACAATAGTGAGGAAAGACGATCTAGGCCGGAAAGGTCAAGTAGTCGTGATCATACTGCTAATGCT TCAGATAACCAAAGAGTTCATGATAGAAAGCACAAAGAAGGCTTGAGGAAAAGCAAAGAACCTGATGTTAATAATCTTAATAGTTTAGGCCAGTCAAGTC AAGAAAATCTAAGTGGTCCAACCAGTGAGAAGGACTTGAAAGGCTCTGGGGATGAAGAACGTGCTGAGCTTGATATTCCAGGGCATCGCCTGTCCAGAAA GCGTCAGGTAGACATTTCAGATGATGAACAACAAGATACTCAAAGAGGACGTTCTAAATTAGAACGCTGGACAAGCCATAAGGAAAGGGATTTCATCATC GGCAGCAAGACACTCAAAGGAAGTGACAAGGATAATAAGATTGAGTCTTCTGAAGCTGGGAAACCAGTGGATGAACCTGCCAAACCAGTTGATGTGGATA ACCAACATCACTTGTTGACTGAAGGCAGAGATTCCGTAGATATGGATGGTAAGGATCAGCAGCTTGACACAGTTGAGAGGTTGAAGAAGCGCAGTGAGCG GTTCAAGCTTCCCATGCCTAGTGAAAAGGAGGCTCTGACTATGAAGAAGATAGAGAGTGAACCAGTACCTTCTGTCAAAAATGAAGTTCCGGTGGATTCA GAAGTCAAACATGAGCGCCCACCCCGAAAAAGGAGGTGGATCAGTAACTAAATGAGAAACCTGACATATTTGGCTGAAACTCTTCATCAACTTAATTTCT GCTTGGGCAGATCCTTTTAAAGTCTAGAACATTGGCAAGCCAGCCATGCTTTAAATTTCAGAAATGACATCTATAGGGGTTTGAGATAATTTCTAATTCA GTAATATCATTTTGTAACCTATACATTTACTTTACACTGTATATACAGGTAAAATGTAAAACATAAAACATAAACTGGTCCTTACAGGTGCCCTCTTAAA AGGTCTTTTTGATTGAGGATTTTTATGTGGGGAAGGTGACCAAGGTTGGATGCAATATGACATTCAGAAACCATGTGGGCATGACTTGTGAGGCAATGAG CCTGATACTGGCACCTTCACACGTGGCCTTCCACCGGAGTTGGAATCATCGTCGAGTTCCCAGTCTTTGGAAACGTTCAGTCATAATCCATATGAAATCG ATGAACGCATTAAAATTCTTGAGTGACATATCTTGGTGAAGGGTGCTCCACAGAGATGGTGCTTGGCTCCAAAACAATATGCTTTTATTTATTTATTGAA CCATAGATATCAGGGATTGTTACACTTTGCTATAGACTGTAAGCAAGAACTTGATTACTCTTCTTTTTTTCTTCTTCTTACGAATTTGCTTTTCATTTTT ATGCGGGAATGATGAAACTTATTAGAGAGCCTATGTTGTATCTAGAGATCAAATGACATAGTTAGAGATTAGGAATTTCAACAAGGAATGAAAGAATATA GCAGCATAATTTATTGCAAAA
• Tissue: pods
• Gene name: LI_gene_143747;
• Additional information: details;

Expression of Ll_transcript_365329

FPKM

• PAB: 3
• PNAB: 7
• PS1: 9.1
• PS2: 8.3
• PS3: 9.7
• PW1: 6.5
• PW2: 6.5
• PW3: 7

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_365329

• Blastp: FIP1[V]-like protein from Arabidopsis with 47.69% of identity
• Blastx: FIP1[V]-like protein from Arabidopsis with 56.23% of identity
• Eggnog: mRNA processing(COG5213)
• Kegg: Link to kegg annotations (AT5G58040)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019416962.1)
• Pfam: Fip1 motif (PF05182.12)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;