Ll_transcript_366636

• Id Trinity: TRINITY_DN46320_c0_g1_i2
• Name Transcript: Ll_transcript_366636
• Sequence: GTGAGGGAGGGGGAGCAGGTTCGAGTCCATGCTTCGAAAGTTGGTTTGGAGAGCAATGTATTTGTTGCGAATGCATTGATTGGTATGTATGGGAAGTGGG GGTTCGTGGAGGAGGGCCAGAAGGTCTTTGAATTGGCCATCGAGTATAGAGATTTGTATTCGTGGAACACCATGATTGCTGCCTACGTTGGATCGGGTAA CATGAGTCGAGCTAAGGAAGTGTTTGATGAAATGCCAGAGCAAGATGTTGTGTCATGGAGTACTATAATAGCTGGTTATGTTCAGGTTGGTCGTTTCATG GAGGCTTTGGATTTCTTTCACAACATGTTGCAAGTAGGTCCCAAACCAAATGAATATACCCTTGTAAGTGCTCTTTCAGCCTGTTCAAATCTAGTAGCAT TGGATCAGGGAAAGTGGATCCATGTTTATATTGGGAGGGGTGAGATTAAGATGAATGAGAAGCTTCTTGCCAGCATTGTTGACATGTATGCGAAGTGCGG CGAGATAGAGTCTGCATCAAGAGTTTTCTGTGAGCACAACGTGAAGCACAGGGTTTGGCCTTGGAATGCCATGATTGGTGGGCTTGCAATGCATGGAAAA GCCACTGAGGCTATAACTATCTTTGAACAAATGAAGGCAGAGAAAGTTTCTCCTAATAAAGTCACATTTGTTGCTTTATTAAATGCTTGTAGCCATGGCT ATATGGTCAAGGAGGGAAAATTCTATTTCAGATCGATGGTTAGTGATTATGGAATTAACCCAGAAGTAGAGCATTATGGATGCATGGTGGATCTACTGAG TCGTGCTGGCCTCTTGAAGGAGGCAGAAGAAATGATTGCTAGTATGCCCATGGCTCCAGATGTAGCAATTTGGGGAGCACTGCTAAATGCTTGTAGAATC TATAAAGATATGGAGCGGGGATATAGAATTGGCAAAATAATTAAAGAAATGGATCCGAACCATATAGGGTGTCATGTTTTATTGGGCAATATATATTCTA CTTCGGGGAGATGGAATGATGCAAGGATGCTGAGAGAGAAGAATGACAATAGTGAGAGAAAAAAAGTTCCTGGTTGCAGTTCAATTGAATTAAAGGGGGT ATTCCATCAATTCCTTGTTGGAGATCAATCACACCCTCAAAGTAAGGAGATTTATTTATTTTTGACTGAGATGATGATCAGGTTAAAGAATGCTGGGTAT TTTCCAGAATTAGGGGAACTTTTGCTTGATATTGATGATGAGGAAGATAAAGAGACTGCTCTGTCTATACACAGCGAGAAGTTGGCTATTGCTTTTGGGT TGATGAACACAGCACCTGGAACTCCAATTCGCATTGTGAAGAACTTAAGAGTTTGTGGGGATTGTCATCAAGCAACAAAGTTCATCTCGAAGGTTTACGA TCGAGTAATTATAGTTAGAGACAGGACAAGGTATCATCACTTCAAAGATGGAATCTGTTCTTGCAAAGACTACTGGTAGATAAAGAGAGTGCTACACATG TCAAATAAGTAACAACATGCATGCTTCCCTATTTGCCTGCTCAGATTGTTTACTACTATTTGCATGATAAGTTTCAAAAAATTGCAGATACTGATCAAGA AATTGAATTCTGGATTGTTTATCAAAAGATGGCAAGCTCTTTCACATATCCAGTTGGCGGGGCATAGATATACGCTTGATGATAGATTTTAGCTAGGGTG AAAGATAATCTTGCAATGATCTGCTCCTTTACTTGCAGTAAAGTTGGAAGCACTAAAGTTTTTCTCTATTTGCATTTTTTAGCAGTGCTGCAGTTGACAT ATTAAAGGTGCTCTTTTGCTTTACATGCTGCTGTCTGGTTCCTGAACATTCCATGCCTCTGGTTGTCTCAATTCTTTACAGCTCCACATAATGAAAGTTG TTGAGGTGGATTAAGAGATGGGACTGGACTAATGGAGTCACAGAGAGCAAGCAATACAGAATTAGAAAGTGAGATCTAGACATTGGAAGCTGAAAAGAGG ATGGCAGCTTGCCCCAACTCTTGTTGCATCTTATTTTTATTAGAATATATTGAAGTATTTTAGAATATCTTAAATTACATTATAGAGAATATCGAGATGA TCCTTAGATATAGAATTAGAGAGAATATCTCATATTATAATTTATCTCCTTACGCCCATTCATTATTTGACATGTATCTTAATCTTCTTTTTATAATATA TTTTAAAATGGAAATTCA
• Tissue: pods
• Gene name: LI_gene_143753;
• Additional information: details;

Expression of Ll_transcript_366636

FPKM

• PAB: 0
• PNAB: 1.3
• PS1: 0.9
• PS2: 0.4
• PS3: 1
• PW1: 0.7
• PW2: 0
• PW3: 0.3

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_366636

• Blastp: Pentatricopeptide repeat-containing protein At3g62890 from Arabidopsis with 47.67% of identity
• Blastx: Pentatricopeptide repeat-containing protein At3g62890 from Arabidopsis with 47.06% of identity
• Eggnog: Pentatricopeptide repeat-containing protein(ENOG410Z7Z7)
• Kegg: Link to kegg annotations (AT3G62890)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019465124.1)
• Pfam: PPR repeat (PF01535.19)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;