Id Trinity | TRINITY_DN46327_c0_g2_i3 |
---|---|
Name Transcript | Ll_transcript_365189 |
Sequence | AAAACAGCAACTAGGCAACCTCCATTGAACTTAACCAATAAAAAATGTCCATTATCCCCACTGACACCCCACTTTAATACATATTATATATACCATAAGA TACTACCATGTTCCTATTGTCCCACCTAACTGCTGCTTTCAGAGAAAGGAGACATGGATTTGTAATTTCACTATAAAGTTTGCCTAGAGTATGAATGTGC ATGTTTTATATTTTAAGTTTTTGATGATTTTTTTAACTTAGCTTTACCAACTTCAGTTGAAAAAAGACTTCAACTTTTACCACCCCATGTAAAATTTTCA AACCCTGCCAATTCCAGAACTTATGTTCTCAACAAACACATGTTTTTGGTCTTGTCCTTTTCATCAAAAACATTTTGGGTTGTTCCAAAAAAACTACCTT CTCATTGCTTCGGTGTCACTGAATGTGGGCCTTCTTTTTGCACTTAACTCACATTTATTCTTGCTTCAAGTTACCATTTTCAAAATCTGTAATTTATTCT CTCATTTATTACTCTATTTTTCTTTTGAATCACCACTGAGGAGGTTGGTCTTGGAGTTTGGTATGGGATGAGGTTGGTTTTAGGCGTGGGTATGATTTTG CAGCTGCTGAAGCTCTGCATCATTGGTTTTGCTCTGGCAGTTCAAGGATCCAAAGGGTCTATTATTACTCTAGCACCAGCCATCCTTCCTGCTATTCCTC CGATAGTAGAAACACCCGGGCCTATCCATCACGGAGAATCAAGTGAAAGCAATGCACCAAGCTTACCATCAGATCCAGATGGGCTTGTGATATCCCCACC TCCATCAAACTTACCTGTGCACTCTCCCCCTAGTGAAACACCCAGTCCTTTACACCCAAAAGAATCAAGGGGAACTATTGCTCCAAGCTCTCCAGCAGTA CAAAATGGGTCATTCTTGAATCCTACGAATACATTACCACCTCCTGCACCAGCTCCAACTCCTCCGAAGATAAAAGAAACTGAACCATCCATATCTCCAA GTCCAAGCTCTATAGTATCATCACCACCACATGAGGTTGTTCCTTCACCATCAACAGTGCAAGGGAATGTGCCCCCACCAATAAAATCAAGTCCACCTCA AAGTGAAGAACCTGCTATTAGGCCTCCTGTCCCCACACAAACTGCACCAGCCCCAGTTGCAATACAATCTGGTGGATCGCCAAAAATTTCACCAGTCAGC CAACCAACTGAAAATGGAACTTTGGCACCTAATGTTGATAATAGGAATGCAAATAAGAGTCACACTGAAGTGCCACTTTCACCAGCACCAGTTGCGACAC CTTCTACCAATTTTGCCAATAACTCAGCAGGTAGTCCGCCAACAGAACATGGAAATTTTCCTCCTAAAGAGGGTACAAGTAATGGTCACATCCCAGAACC AACTTCACCAGCACCTGAAGCAGTTAATTTACCAAATATTTCACCACTTAGCCAGCCAACTGAACATAAAAGTTTGCCTCCGATTGTTCATCAAAGGAAT GCGAGTACAGGGCACATAGTTTCACCAGCCACACTAGCAATTCCACCTGTAACAATACAAAAAAATTCAACTGTAAGACAACCTACTCAACATGGAAGTG TTCCACCTAATGTTCATAAAGAAAATGCAAATAAAGGTCACAAACCTGAGACACTTTCACCAGAATCACTTGCGCCCCCACCATGGAAAGTGGAACATAA ACCACCAGTAGCCGATCCTATTGTCCCAACAATAACTCCATCCATATTACCTGTACCTGCTACATCACCAGCAAGTGTATTTCCATTAAATCAGCCATTG GTCCATCCGATTATTCCAGCAGTATCTCCGTCAAAATTACCAGTGCCTGTTGCCCCAACCATATCAACTCCTTCCAGAAGCTTCAATTGGTCAAAAGCCA GACCACCAGTTTCTGCACCTTCATACAAAAAAACTGAAGCCACTTCCAGCTGTAATACATTCCCCTGCTCAAGATCAAGCACTTCCTCCGTCATTACCTC CAAAAAGTGGAAGACGACATAATGTTCCACAACCAATCAACCCAGGTTCTTCAGTGTCTCCACTCTTCTCCCCTATTCATTCACCCAAGACCCAAGATTT GCCTGCTTCTTCTCCATCAATCAAATCTGTCCCCCAACCAATCAAAATATCTCCTGTTAGGTCTTCTTCCAAGAGCCCTGAGACACCTCTCCTGCCTCAA GTTCAAGCTTTGCCGCCTCCACCTCCCAATCAAGATTGTTTATCAACTGTCTGCTCAGAGCCCTATACAAATTCTCCACCTGGAGCGCCTTGCAGATGTG TCAGGCCCATGCAAGTCGGTCTTCGCCTTGGTGTTTCTCTTTATACCTTCTTCCCTTTGGTTACAGAACTGGCTTCTGAAATTTCCAGCGGAGTTTTCAT GAAGCAAAGTCAAGTTCGCATTATGGGAGCCAATGCAGCAAACCAGCAACCTGAGAAAACCATTGTCCTCATTGATTTGGTACCGCTTGGGGAAAAGTTT GATAATACTACAGCCTCTTTCATTTCTGACAGATTTTGGCATAAACGCGTTGTTATAAAAGCTCCCTACTTCGGAGACTATGATGTGTTATATGTGAACT ATCCAGGTTTACCTCCTTCTCCTCCTTTACCACCTTCAAGCATTACTGTAATAGATGGTGGACCATATTCCGGAAATGGCAATAATGGAAGGACAATAAA GCCCCTTGGGGTTGACATACAGAAGAGGCAGCATAAAGGTGAACTTAGCAGAGGCGTAATTGCCATTATTGCTGTTTCAGTTTTCCTAGCAGTTATTTTA TGCATTGCTGCTGCTTGGGTCATGTTCAAGTTCAGAGATCATGATAGTCAACCACCATCGACCTCACAGGTTTCACAACCGTCTCTTGCGAAAGCACCAG GTACCAGTGCCTCAGTAGTTGGAGGCGGGGTTGGTTCCAATTCCACATCATTTCGATCTAGCATTGCTGCTTATGCAGCATCTGCCAAGACTTTCAGTGT GAATGACATTGAGAAAGCTACCGATAATTTCAATGCTGCAAGAATACTTGGAGAAGGTGGCTTTGGGCTTGTTTACAGTGGTATCCTTGAAGACGGGATA GAAGTGGCAGTGAAGGTTCTAAAGAGGGAAGATCATCATGGTGATCGTGAATTCTTAGCTGAAGTTGAGATGCTTAGTCGTCTTCACCATAGAAATTTGG TCAAATTGATTGGTATATGTACTGAGGAGACTTTCCGCTGCTTGGTTTATGAACTCGTTCCAAATGGCAGTGTGGAATACCATTTACATGGAGTTGACAG GGAAAACAGCCCACTTGATTGGGGTACTCGGATGAAGATTGCTCTCGGTGCTGCTCGTGGTCTAGCTTATTTGCATGAAGATTCGAGTCCTCATGTTATA CATAGGGACTTCAAGTCTAGCAACATATTGTTGGAAGATGATTTTACTGCAAAAGTTTCTGATTTTGGATTGGCTCGAACAGCAATGGATGAGGAGAACA GACACATATCAACACGTGTCATGGGAACTTTTGGTTATGTGGCTCCGGAGTATGCAATGACTGGGCATCTTCTTGTTAAGAGTGATGTTTACAGTTACGG TGTTGTTCTTCTTGAGCTTTTGACAGGGAGAAAACCTGTAGACATGTCACAACCTCCTGGTCAAGAGAATCTTGTTGCTTGGGCACGTCCGCTTCTCACA AGCGACGTAGGATTGGAAACAATAATTGACCCATCTTTGGGAGCTGATGTGCCTATTGATAGTGTGGCTAAAGTTGCAGCCATTGCTTCAATGTGTGTAC AACCAGAGGTATCAAACCGTCCTTTCATGGGTGAAGTTGTTCAGGCCTTGAAACTTGTTTGTAGTGAATGCGACGAAGCGAAAGAAGAAGCATGTCTAAG AAGTTGTAGCCAGGAGGATTTGTTTATTGATATGGATGTGGGAATTAGTCCTTCTGGACAACTGGAAGATAATTTAGAAAGGCGATTCTCCGGTACTAAC TTTGATAATGGAATTGATATTGAAAGAGGGTTGTCAGCATCAGAACTATTCAACTCATCAGCAAGATTTGGTAGGCAGGAATCTGAATCATTTAGAAGAC ACTCTTACTCAGGTCCTCTAAGAACCGGAAGAAGCAGGCGGTTGTGGCAGATAATGAGAAGGCTTTCTGGTGGTACTGTCAGTGAGCATGGAAATATGTT CAAGTTATGACCACATTCCCATAGAGAAATTGCAATATTTGAATTTTCTGTGTATAGATATTGATCTCAATGGATTTGTTAATCTGCAGTTCATAATCCC AAGTCCCTACTTTGCTGCTAAACTGCAAAATCTTCTTTCACTGGGACCAACTCTGAAGAGGGGAAGCAATGTGAATCTCACATGAACAAGGGGTTCTTAC TTCCTCCAAACCAATAAAAGCATTACAAGCATAGTACAACATTCCAAGCATAGTGCCTTTGCAGTTGCAGCATTAATAAAATTAGGCCAAAGAGGTTTGT AATATTGAAATTGTCAAAACACCACTTGTGTTTCAGTTGTGTAGGGCTATATAAATCATGGATGCATTTATTAACTTTACAGGCCATATATTTTGAAGTA ATCGTGTGGTGATAGGCTTGGTATAGATGAGTCACTGCAATGACATGCTATAATAAACTAGATACCTAATAAGTTAACACAAAAATGTGTGCAGATGGGA GTGCATGCTTATGGACCGCC BLAST |
Tissue | pods |
Gene name | LI_gene_143795; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_365189
Blastp | Receptor-like serine/threonine-protein kinase ALE2 from Arabidopsis with 51.86% of identity |
---|---|
Blastx | Receptor-like serine/threonine-protein kinase ALE2 from Arabidopsis with 49.73% of identity |
Eggnog | Serine Threonine protein kinase(COG0515) |
Kegg | Link to kegg annotations (AT2G20300) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019442881.1) |
Pfam | Protein kinase domain (PF00069.24) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |