Ll_transcript_366709

• Id Trinity: TRINITY_DN46332_c6_g3_i2
• Name Transcript: Ll_transcript_366709
• Sequence: AGACAAAGTTCAGCTTTTCAATTTGCAACTACTTTCCATAGAAACTAATTGAAGTTATGAAACATATAATTTCGATATTTCAGGGCACCGCGATGGGCGA GTGTGAACCTAGGAATTTTCATTTGTATGCAATGTTCAGGAATCCACCGAAGTCTTGGAGTGCATATATCAAAGGTTCGGTCCACAACTTTGGATACATG GTTGCCGGATCAAGTTTCCTTCATGCAATTTATGGGTAATGTGAAGGCAAACAAGTACTGGGAGGCAGAACTGCCGCCAAATTTCGACAGAAATGGATAT GGAATCGAGAAGTTTATTCGTAACAAGTACGCGGAGAAAAGATGGGCTTCAAAAGGTGGATATCATGCAGCTACAAAGTTAACTGATACAATCTTTAACT GCAATGAGTCACCAACTGGTGGAACAAAGAGTGGTATTCCAAGAAGCAGGAGATTATCTCTAGAGGAAAGCATTCTTGTGAGCCACATGGCACAAGTTCC ACCTCCAGTAACACGATCTCGTGAGGGCTCCTTAGATTTGCCAACGAAGATTTCAGTTTCGCCACCAATAAAGAGGCCATCCGTATCACTTGATTTTGAT AATTTATCCGGAAAGAGCACTGGCACTGTTGATCCTTTTGGCTTTAATGATAAAAAGAGTTCCTCTGTACCTCCATCAAACTGGACAACCTTTAATGATA AAAAGAGTTCCTCTGTACCTCCATCAAACTGGACAACCTTT
• Tissue: pods
• Gene name: LI_gene_143832;
• Additional information: details;

Expression of Ll_transcript_366709

FPKM

• PAB: 0.2
• PNAB: 0.5
• PS1: 0.3
• PS2: 0.2
• PS3: 0.3
• PW1: 0.2
• PW2: 0.3
• PW3: 0

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_366709

• Blastp: Probable ADP-ribosylation factor GTPase-activating protein AGD15 from Arabidopsis with 45.08% of identity
• Blastx: Probable ADP-ribosylation factor GTPase-activating protein AGD15 from Arabidopsis with 48.06% of identity
• Eggnog: domain, ankyrin repeat and PH domain(COG5347)
• Kegg: Link to kegg annotations (AT3G17660)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019430496.1)
• Pfam: Putative GTPase activating protein for Arf (PF01412.17)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;