Ll_transcript_366898

• Id Trinity: TRINITY_DN46336_c0_g1_i6
• Name Transcript: Ll_transcript_366898
• Sequence: ATGGTAAACCGTGTAAATCGCAAACACAGTTAACAAAAATAAATCAATTTAACATTCAAAATTTCAAATGAAACTTTTTTGTTGGTTTGATAAAGCAACA ATTTATGTTTAAATTTTTTGGGTTCGTCGCTTTGCGTTTGGGATCTTCTCCTTAGCCTCGAAGAGAAGGAGAAGGAGAAGGAAAAGGGAGAAGAGAAGTG TTTGTGTGTGAACAAGGAAAGGGTACCCCACACAAAAACATCCCTTCTACTTTTTCCAAATACCATTCATTCCTCGCAACGCAACAACTTTCGATTCTTC TTTTCTTTCGTCAAACCCATTTGGGTTTATCTACCTTCCCTTCTCTTAATCAACTCTTTTATTTTTGACTTTTACATCATCGCTTCTTCTTCTACTTTTC CTTCTTTCCAATTACTCATTCTTTTATTTTTTATTTATTTTTAATTCCATCAATTACAAGTGTCAATGATCTAGAAATACACAGAGAAAGAGTCCATCAT TGTGTTCTGTTCCCATTTGTTTCAAACATTCTTTATTTCCCATAAAATACACAAAATTGAAATATTCAATTTATGTTGTTCTACTTGTCTATGTCTTTGT CAATTATCAGATCATAAACTTCGCAACACTGATTTTTTAACCGTTTCGTTTCTTTTGATTGGGTCCCGTTCTGTTCTCAGAAGGAGGGAGTTTGTGATCA TATAGCACTTAGAGTTATGGGTTGGCTTAGCAAAATTTTTAAAACCTCTGACCATAAGATTTCGGAAGGGCATTATCATAATAATCATTCAAACTATAAA GACGATGCGGATTCTTACACACCATCAACTTCAGGGGATGTTTGGCCCAAGAGTGAGGATGAAGATATCGATCGTGCTATTGCACTATCTCTTGTAGAAG AAAATCAGAAAGGAAACGGCGTAAATGACTACAAATCACAATTAGAAGAAGATGAACAACTTGCCCGAGCTATAGAACAAAGCCTTATTGTCGAGTCTCC ACCCAGACCCAGATATGGAAATGAAAATATGCATCAACCGGTTCCATTGTATTTCCCAATGGGGTACAGGTAGGATTTAGAGAACAAATGACATTATTGT ATGAATTTGGTGTCCTAATTCGAATATTTTTTTGTTAGACTACTTCAATGAGCATGCTAAGATTATCATCTAAATTTGTCTATTCACCATTTACCACAGG GTCAAAAATCATCCTTCTATCAGTTCTTACCTAGGCACGTGCTGCTAGTACTTGATCATCTGGATTATATATTTTGACATGTTATACCTCGTAATTGGTC ATTAACATATTTTCTTTGTATTCCCAGTTACTTTTGCTGGTCCTATTGGATCACTTGTTAACTAAAATAGTGTATTACTCATTAAGCATATTTTGGTAGG TAGGCTTTTGATGTAAGAAAACTATGAGGTTGTCTAAATACATTAATCTTCATCCTTTACCCATCTTCGAATACCTTGTATAAAGCATATTATGTTAGTT AACTCATGGGTAAGGATACTGCAATAAAACTAATTTGCAGCCAAATATTAGTTTATACATCTAGATCATCACGGAATAATCAGCAAACAGATTATCACGG GTTCCTTGAATTAAGTTCCACATTCAAATAAGGGATATAATGATATGTAGGGTTGAAAACCTGTATCACGCAGAACATAATCAATGTTCATAAACAAAAG GATAAAATTTCTATCAAGAATATTTTTGTCCGTCTTCACTTGATGGACAAATTGTTCTCTTTTTTCATTTCGCTATTATGTCATGTATCAACTATATACA TGTGATGCAGACATAATTGAACTTCTCTGGATATTTACATAATAGGGTTTGTGCTGGCTGCAATACCGAGATTGGTTATGGACGATATTTAAATTGTTTG AATACATTCTGGCATCCTGAATGTTTCCGTTGCCGTGCCTGCAACTTACCAATCTCTGATTATGAGGTCAAGAGTTTCCATTTACTTGTTACATTGCTCA TTTCATGGTTTCATAAATCTTTTTTACTCTGTACTTATGGTTTTGTTGCTTTTGCTTATATACACTTTAGTTTTCCACATCTGGCAATTACCCTTACCAT AAATCATGCTACAAGGAAAGCTACCATCCAAAATGTGATGTCTGCAAGCACTTTGTAAGTATTTTACCTTAAAAGATTTTATATTTTTGCTTATTATAAC CAATATGCACAGTGTTTTGTTTTCCATTTACTAAGTAATATTTAAAAATGGATGAAGAGAATGGAAAATGCTATTCAGACTAGAACCTTAAGGAAGCTAT ATCTTATATCTATGCTACATGCAAATATAGGTATGATTAATAGTGTTCACAACTTCATATGTTGTTTTCCTGTTCCTGACCTTGAAATCTTGGTGTCCTA TCAATGTGGACAAGCATGATGTATGTGAAACTTCATTTCTTCTGGGAACAATTCTTTCACAACTCACAAGATTGTTTTTAGTACATATTTCACAAGCTGT TATCTATTTCTTTCTTATGTTTTTGTGCCTGCATTTGGAGAAGCTGGGTGAATCATTTCCATTAGGAATTAGAATTATACTCATTGATGATGTGCATAAT CTATTTGATCATTGTTTCTTCTCATGATCACTTTCCCTTGTTCATATAACTTTTAGAGAGTCTGTGTTAGTTCATATCTGTGATGGTGACACATTAAGTG GGCTTTTACAAATGCTTGCTCGAAAGAACTATATTCGATCTCTGCATCTAATCACTAATCAGGGTATGGAAGATGCTATATTATCAAAGTTTGTGTCTCA TTTTCTTGGTGATGTTGTTCTCACTTCAATATGGTCGTAGCATGGTAGCAGAAGGTGCTACTGGCATCGCTTTGTTTTTTCAAATTTGTGGATGCTGTTT GAGTTATTCATGATGTTTATAACTTTTATATGTTAGAATTAAGTAAAGATACGCTAGCCAGTTTTCACCTTGACACCAGCCTTATTATCTCTTATTACCC GTTGCTGTTACTTTTTGGTTTGACAGATTCCGACAAATCATGCTGGTCTTATTGAATATAGGGCACATCCATTTTGGATCCAGAAATATTGCCCTACCCA CGAACATGATAATACCCCACGCTGTTGCAGCTGTGAGCGAATGGAGCCACGAGAGGCTGGATATATTGGTCTCAATGATGGTCGGAAACTCTGCTTAGAA TGTCTGGACTCTGCCATCATGGATACTAATGAATGTCAACCTCTATATGCTGATATACAAAAGTTCTATGAAAGCCTAAACATGAAACTGGACCAGCAAG TTCCACTACTCTTGGTTGAAAGACAAGCACTGAATGAAGCAAGAGAAGGGGAGAAGAATGGCCACTATCACATGCCTGAGACCAGAGGATTGTGCCTTTC AGAGGAACAAACTATCAGCTCGATTTCGAGACGGCCTAGACTTGGGACTGGAAATAGAGCAATAGACATGAGAACACAACCATACAAACTAACTAGACGC TGTGATGTGACTGCAATTCTCATTTTATTTGGACTTCCAAGGTTGCTTACCGGTTCGATCTTAGCTCATGAGATGATGCATGCATGGCTACGGCTTAGAG GTTATCAGACTCTAAGTCAAGATGTTGAAGAAGGTATCTGTCAGGTTTTGGCTCATATGTGGTTGGAGTCTGAGCTCTCTTCTGCATCCGGAAGCAACCT TTTATCAGCTTCGTCCTCGTCTGCATCGTATGCTTCGAGAAAAGGTAAAAGTCCTGCTTTTGAAAGGAAGCTTGGGGAGTTCTTCATGCACCAGATTGAA TCTGATATTTCCCCAGTTTATGGAGATGGATTTAGGGCAGGTCAAATAGCAGTGCGTAAATATGGTTTACAAAAGACCCTTAACCATATCTGGATGACGG GTACTTTTCCATTTTGAAATATAGAGATTGTTCCTCATTCTTTCTAGAGATTAAGCTAAAGCTACTTAGGTATTATTAGCTTTGAAAAAGTGTGGAGTTT TTGTACTTATAATTAATTGATACACTTGTGGATGTATTTATTACATTCATTTGGTCTTTTTAATCTTGTTTAATTGCAACAAAAAAACATAAAAAAGAAA ACGAAACACCTTCCTACCAATATTAGCTAATTACTTCTGTGTTTCAATAGAAACCAAACCAGAGCATGGTGTTTTTAGTATAATTGCATACATTTTTTCT TTTTTATAACCACCCAGATGTGTCATAAGTTTATTAACAATCGGTTTACAAGTGGCACGTGATTGATGTAAG
• Tissue: pods
• Gene name: LI_gene_143843;
• Additional information: details;

Expression of Ll_transcript_366898

FPKM

• PAB: 15.4
• PNAB: 3
• PS1: 5.6
• PS2: 3.3
• PS3: 5.1
• PW1: 3
• PW2: 3.7
• PW3: 3

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_366898

• Blastp: Protein DA1 from Arabidopsis with 73.93% of identity
• Blastx: Protein DA1 from Arabidopsis with 73.93% of identity
• Eggnog: PDZ and LIM domain(ENOG410XRD4)
• Kegg: Link to kegg annotations (AT1G19270)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019458702.1)
• Pfam: Protein DA1 (PF12315.7)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;