Ll_transcript_366900

• Id Trinity: TRINITY_DN46336_c0_g1_i8
• Name Transcript: Ll_transcript_366900
• Sequence: ATGGTAAACCGTGTAAATCGCAAACACAGTTAACAAAAATAAATCAATTTAACATTCAAAATTTCAAATGAAACTTTTTTGTTGGTTTGATAAAGCAACA ATTTATGTTTAAATTTTTTGGGTTCGTCGCTTTGCGTTTGGGATCTTCTCCTTAGCCTCGAAGAGAAGGAGAAGGAGAAGGAAAAGGGAGAAGAGAAGTG TTTGTGTGTGAACAAGGAAAGGGTACCCCACACAAAAACATCCCTTCTACTTTTTCCAAATACCATTCATTCCTCGCAACGCAACAACTTTCGATTCTTC TTTTCTTTCGTCAAACCCATTTGGGTTTATCTACCTTCCCTTCTCTTAATCAACTCTTTTATTTTTGACTTTTACATCATCGCTTCTTCTTCTACTTTTC CTTCTTTCCAATTACTCATTCTTTTATTTTTTATTTATTTTTAATTCCATCAATTACAAGTGTCAATGATCTAGAAATACACAGAGAAAGAGTCCATCAT TGTGTTCTGTTCCCATTTGTTTCAAACATTCTTTATTTCCCATAAAATACACAAAATTGAAATATTCAATTTATGTTGTTCTACTTGTCTATGTCTTTGT CAATTATCAGATCATAAACTTCGCAACACTGATTTTTTAACCGTTTCGTTTCTTTTGATTGGGTCCCGTTCTGTTCTCAGAAGGAGGGAGTTTGTGATCA TATAGCACTTAGAGTTATGGGTTGGCTTAGCAAAATTTTTAAAACCTCTGACCATAAGATTTCGGAAGGGCATTATCATAATAATCATTCAAACTATAAA GACGATGCGGATTCTTACACACCATCAACTTCAGGGGATGTTTGGCCCAAGAGTGAGGATGAAGATATCGATCGTGCTATTGCACTATCTCTTGTAGAAG AAAATCAGAAAGGAAACGGCGTAAATGGTGAGTGTATAGCTCTCACATGTCATTGCATATTCTTGGAAGGGCCACATGTATGTCAGTGCATTTTGTTTGA ATTTTTACAGTCAGAGGGACAGGTTGCTATGGACAAATGCAATATGGAAAGTTCTAAATTTATACTGTAATACCTTTGTTGTTATTGTTCATGTTTTTCC GAAGTCCTCTTCATCTTCATTTGTAGTTACAATAAAATTGTTAGGAAACTTGTGATCCTATCCTATGAGAATGATGAAGCCAATTGCTTTCTGTCGAATG TCCTGTTTAAAGGCTGTTGCTAATCTTTTCTTTGCATGCGATGTACCTAGCTTAACATTTTTTACCGTTAGCTTAGAATGATAACTTGATTTTCATTTGC GCAATCATTTCATTATTTACTATTGTCTTGTTTAAAATCATTAAAAATTGATTTGATTTAGTATTATCACCACTATACTATTATTGTCTTCCAGTTATTA CTCTGAAGTATGAAATTTCTGCCTATGTTCTCATTCTCAACAGGTGTTTAACATAAGAACAGTAACCTACCATTTCACCGTTTTTTTAACCCATCGTTTT TAGATTTTTGTACCAGTAAGCATGTCTAACTTGTGTTTTCCTTAAGACCAAATATAATGTTGTTTTACATTAATAAGTTTTTGTCTATTTTATAGACTAC AAATCACAATTAGAAGAAGATGAACAACTTGCCCGAGCTATAGAACAAAGCCTTATTGTCGAGTCTCCACCCAGACCCAGATATGGAAATGAAAATATGC ATCAACCGGTTCCATTGTATTTCCCAATGGGGTACAGGGTCAAAAATCATCCTTCTATCAGTTCTTACCTAGGCACGTGCTGCTAGTACTTGATCATCTG GATTATATATTTTGACATGTTATACCTCGTAATTGGTCATTAACATATTTTCTTTGTATTCCCAGTTACTTTTGCTGGTCCTATTGGATCACTTGTTAAC TAAAATAGTGTATTACTCATTAAGCATATTTTGGTAGGTAGGCTTTTGATGTAAGAAAACTATGAGGTTGTCTAAATACATTAATCTTCATCCTTTACCC ATCTTCGAATACCTTGTATAAAGCATATTATGTTAGTTAACTCATGGGTAAGGATACTGCAATAAAACTAATTTGCAGCCAAATATTAGTTTATACATCT AGATCATCACGGAATAATCAGCAAACAGATTATCACGGGTTCCTTGAATTAAGTTCCACATTCAAATAAGGGATATAATGATATGTAGGGTTGAAAACCT GTATCACGCAGAACATAATCAATGTTCATAAACAAAAGGATAAAATTTCTATCAAGAATATTTTTGTCCGTCTTCACTTGATGGACAAATTGTTCTCTTT TTTCATTTCGCTATTATGTCATGTATCAACTATATACATGTGATGCAGACATAATTGAACTTCTCTGGATATTTACATAATAGGGTTTGTGCTGGCTGCA ATACCGAGATTGGTTATGGACGATATTTAAATTGTTTGAATACATTCTGGCATCCTGAATGTTTCCGTTGCCGTGCCTGCAACTTACCAATCTCTGATTA TGAGTTTTCCACATCTGGCAATTACCCTTACCATAAATCATGCTACAAGGAAAGCTACCATCCAAAATGTGATGTCTGCAAGCACTTTATTCCGACAAAT CATGCTGGTCTTATTGAATATAGGGCACATCCATTTTGGATCCAGAAATATTGCCCTACCCACGAACATGATAATACCCCACGCTGTTGCAGCTGTGAGC GAATGGAG
• Tissue: pods
• Gene name: LI_gene_143843;
• Additional information: details;

Expression of Ll_transcript_366900

FPKM

• PAB: 2
• PNAB: 0.7
• PS1: 1.4
• PS2: 1.1
• PS3: 0.8
• PW1: 0.8
• PW2: 0.5
• PW3: 0.8

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_366900

• Blastp: Protein DA1 from Arabidopsis with 40% of identity
• Blastx: Protein DA1 from Arabidopsis with 82.57% of identity
• Eggnog: PDZ and LIM domain(ENOG410XRD4)
• Kegg: Link to kegg annotations (AT1G19270)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019458702.1)
• Pfam: Ubiquitin interaction motif (PF02809.19)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;