Ll_transcript_366556

• Id Trinity: TRINITY_DN46342_c2_g1_i14
• Name Transcript: Ll_transcript_366556
• Sequence: TGTAAGTGTAAACATCACTTAAATAATCTATACATGTATATAGAAATGAAATAGAGTATTTTTTGAGTCTTGGCTTATAAAAAAGGTAGGTTCTTGAAAG CAACTAAAAACATAGTCCCACTCTCCTAGAAACACTACAACATACTAGAATATTGGGTAGAAGCAGATTTTCATTATTCTCCCTTCGTTATATTAAAGTT TGTTCACATGGAAACTCTTTCATATGGTTCTGCACCATGTTGTCAAATTGTGAACTCAAACTGGAAATCAGTGGATAAGTCCTCGAATTCGCGTAAATCG AGGGTTTCTTATAATTCCTATAAGATTTCTATATGTGGGGGTGTGAGATTTTATGATATGGTGCTTCAGCAAAGAGGTTTTAGGCCACAAAATTCTGTTG AAGGGTCAAGAAGAATAAAACTCAAGGTGTATAGTGGAAATTATGATGGTTATGTGATTGGTGAAGAGGAATCAAGAGATATTTCAGGGTTAGAGGAACA TGCAACTAAGGTTCTAATTCCCGGTCTTCCAGATGAATCAATTGGTGAATCCGGGGTTTCAATAAGTAGTTGTTTTAGGGAATGGAAGCCTAAACTCAAC ATGCACTATGAGAAAGCTGGGTGTGAAAACTTCGGTTCCTCACATGTTCTCTTTCTTCCTGGCTTTGGTGTTGGTTCTTTCCATTATGAGAAGCAACTGA AGGATTTAGGCCGCGATTTTCGAGTATGGGCACTCGATTTTCTAGGACAGGGAATGTCTCTACCTTTTGAAGACCCTGCCCCTTTGTCCAAGGAAGGGAC TACATCAAATGGAAATATTTCTTCATGGGGTTTTGGAGATGAGACTGAGCCATGGGCAGCTAAGCTTGTATATTCTGCTGATTTATGGCAAGAACAAGTT CGCTACTTCGTAGAAGAGGTCATTGGTGAACCAGTCTACGTTGTGGGCAACTCGCTAGGAGGATATGTTGCATTGTATTTTGCAGCATGCAACCCACATT TAGTTAAAGGTGTCACATTGCTGAATGCAACACCTTTTTGGGGGTTTCTTCCTAATCCAGTAAAATCTCCAAGACTAGCCAAAATATTTCCATGGGCTGG AACATTCCCCCTACCTTCAAATATAAAGAGACTTACGGAGTTGTTGTAAGTATGGATTAATTTTTATATATTACTTCATTTCTGATTGTTAGATTGTGAG CCTTGGTGTAACAGTAAGGATGTTTCTTAGTGGCTATGAGTTAATTGGTTCAAATCCTGAACACAACATCTTCACTTGCTGGGGTAAGGCTGCGTATATC TACCCTCTAGACCCACTAGGTGGGAATCTCGTTCACTGGGCCACCTATTACTTCATTTCTGATGGTTTGCTTACATGTTTTCAGTATTTTACTCAAACTT CTCAATTAGGACATTTTCTGTATGGTAGCTGCAAATCCATTCACATATGAGTAACATAATATTAAGAAACACAACTTAAGGGTTAGTTTGGGAGTTGGAT TTTGGAGGGGAACGAAAGGAAAAGGAAGGCTTGGGAGCCATGAAATACACTTTTGAGGTGGGAGAAAATTAGTGATCCTAAAAGTATCGCTGACGTGCTC AATCAGGTTTATGCAGATCATTCGACAAATGTTGATAATGTGTTTTCACGGATAGTTGACATCACAAGGCATCCTGCTGCTGCAGCATCATTTGCTTCAA TTATGTGTGCTCCTCAAGGAGAATTATCCTTCAGTGAAACATTATCTAGATGTCGAACGAACAATGTGCCAATCTGCCTCATGTATGGAAAAGAAGATCC ATGGGTTACACCATTTTGGGGAGTTCAGGTTAAAAATAAGGTGCCCGAAGCTCCATATTATCAGATCAGCCCTGCTGGTCATTGCCCACATGATGAAGTT CCTGAGGTATGCAATTCTCTCACTTTTGAGAATTGAAGTGTTCTTTCTGCTCTTATTTATAAGTTGTTTCGGTCTTCAGTATAGTTTAAATTTTGAAAAT TTCTTGATGAAACCACATTTTAATTTCCTTTTTCTATGTAGTTTATAGATAAAAGATAGTAGATACCTATCTTATGAAAGCAAAAATATGTCAAAATACT TTTCTCTTGTTTGTTTTCTGTAATGTGCAATGATATCATTTAGTTAAACTTTTTAGTTTCTTCCTAAAATCTTGTAGGTATAGAGGTTTATCAAATTTAG GAGATTAGAAAAGCATACCCATTAAAAGGAAATAGGAACTAGGTTAACTACTCATATGTAAAGAGATGATGCAAAGTTCATTTTGTATGAAAATTTATCC GGAAAACTCACAACAACAACCAAGCCTTAATCTCATTAAGTGGGGTCGGCTCGGCTACATGGATCGAACATCGACATAATATTCTGTCTTAAATTAGTTA CATGAATTAGTTACAATAATTAGTTACATGAATTTCACTGTGAACAGGTCATAAATTTCTTACTTCGTGGGTGGATCAGAAACATAGAGTCTCAGGGTTC TTTGTCCTTACCTTTGCTTGAAGAGTTAGACAGTATGAAACAAAATATTGACAGAGAGTTAGAATTTCCCAGAGAAGGTTCAAAAAAATCAGTGATGGTC AAATTTTTAGGTTCCAGTATCTCACTTTGGGACAGGATAAGATCTTACATTAAATCTGATTCCAAGTTCAGGAATTTGGCAGCCAAATCTCAATGATATG TCACACTATGCCCTCTTCAATGCCTCAAGTATATACCAACTTTGTATATTCTCTTCTCTTATTTATAGTTTATAAAAATGTTTTAAGTTGCGATTACGAT CGCGATTGCAATCATGGTTGTGGTTATTACGATTGTAGTCATTGCGACTATACAAGTTGTTTTAGAATCAGTCCTCAATGACTTTGCTTAATATCTATTC CCTTTTCTTTTAATTAAGAGTCTAACTTGAAGATTTGAACTATAATCTACCTATCACAAGAAAAGCTTTATTGTTGTTCTGATATGTGTCATTTTTCTTC CCAACCAATCCTTTGTTAGTAACCTTTACTTGGCAAAGGGAAGGAAAGAAAGAAAGCAGGACATGTTTAATTCTGGATAATCCAAATTCTTAAAATATGT GCACTGATAGTGTAAAGTTTTTTACATTGTCGCACATCATTCATCATTGATTTGTATTACTTTTATTTGAGAGTCAACAATGGATAATAAATCATGGTGA TGA
• Tissue: pods
• Gene name: LI_gene_143894;
• Additional information: details;

Expression of Ll_transcript_366556

FPKM

• PAB: 4.2
• PNAB: 0.3
• PS1: 0.3
• PS2: 0.1
• PS3: 0.1
• PW1: 0.1
• PW2: 0.4
• PW3: 0.1

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_366556

• Blastp: Pheophytinase, chloroplastic from Arabidopsis with 66.27% of identity
• Blastx: Pheophytinase, chloroplastic from Arabidopsis with 66.27% of identity
• Eggnog: Alpha beta hydrolase(COG0596)
• Kegg: Link to kegg annotations (AT5G13800)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019425829.1)
• Pfam: alpha/beta hydrolase fold (PF00561.19)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;