Ll_transcript_366539

• Id Trinity: TRINITY_DN46342_c2_g1_i6
• Name Transcript: Ll_transcript_366539
• Sequence: TGTAAGTGTAAACATCACTTAAATAATCTATACATGTATATAGAAATGAAATAGAGTATTTTTTGAGTCTTGGCTTATAAAAAAGGTAGGTTCTTGAAAG CAACTAAAAACATAGTCCCACTCTCCTAGAAACACTACAACATACTAGAATATTGGGTAGAAGCAGATTTTCATTATTCTCCCTTCGTTATATTAAAGGT AAAGTTTTTATTAACATGTCAAAGTTTAATGATTCTCCCTTCGTTAAATTGGGTAGATATGATTTCTTCAATTTTATGCTTTTAATTATATCTCAATTAT TTGAGTTCCAAATTCATATTATTTATGTTTTCTGTTTTAGTCTTCTCTTCAAAATCTTTGTACAAAATTCAGAAATAGTTTATACAATCAGTTGAAATCG TTACTTGCTTAATTGCTTTGTTTGTTAGAAGAAAGGATTGAGTTTGGAATTTTATAACAGTCAAATTTGTTTTTAAGTTTTAACCCTTTTTGTAAATGAT GATTATGATTATAGTTATAGTGAAAATTAAGTTGAATTTGTACTGAATCATTTTTTGTTTCTGGTTAGTGTACAACATAGTTTGTTCACATGGAAACTCT TTCATATGGTTCTGCACCATGTTGTCAAATTGTGAACTCAAACTGGAAATCAGTGGATAAGTCCTCGAATTCGCGTAAATCGAGGGTTTCTTATAATTCC TATAAGATTTCTATATGTGGGGGTGTGAGATTTTATGATATGGTGCTTCAGCAAAGAGGTTTTAGGCCACAAAATTCTGTTGAAGGGTCAAGAAGAATAA AACTCAAGGTGTATAGTGGAAATTATGATGGTTATGTGATTGGTGAAGAGGAATCAAGAGATATTTCAGGGTTAGAGGAACATGCAACTAAGGTTCTAAT TCCCGGTCTTCCAGATGAATCAATTGGTGAATCCGGGGTTTCAATAAGTAGTTGTTTTAGGGAATGGAAGCCTAAACTCAACATGCACTATGAGAAAGCT GGGTGTGAAAACTTCGGTTCCTCACATGTTCTCTTTCTTCCTGGCTTTGGTGTTGGTTCTTTCCATTATGAGAAGCAACTGAAGGATTTAGGCCGCGATT TTCGAGTATGGGCACTCGATTTTCTAGGACAGGGAATGTCTCTACCTTTTGAAGACCCTGCCCCTTTGTCCAAGGAAGGGACTACATCAAATGGAAATAT TTCTTCATGGGGTTTTGGAGATGAGACTGAGCCATGGGCAGCTAAGCTTGTATATTCTGCTGATTTATGGCAAGAACAAGTTCGCTACTTCGTAGAAGAG GTCATTGGTGAACCAGTCTACGTTGTGGGCAACTCGCTAGGAGGATATGTTGCATTGTATTTTGCAGCATGCAACCCACATTTAGTTAAAGGTGTCACAT TGCTGAATGCAACACCTTTTTGGGGGTTTCTTCCTAATCCAGTAAAATCTCCAAGACTAGCCAAAATATTTCCATGGGCTGGAACATTCCCCCTACCTTC AAATATAAAGAGACTTACGGAGTTGTTGTGGGAGAAAATTAGTGATCCTAAAAGTATCGCTGACGTGCTCAATCAGGTTTATGCAGATCATTCGACAAAT GTTGATAATGTGTTTTCACGGATAGTTGACATCACAAGGCATCCTGCTGCTGCAGCATCATTTGCTTCAATTATGTGTGCTCCTCAAGGAGAATTATCCT TCAGTGAAACATTATCTAGATGTCGAACGAACAATGTGCCAATCTGCCTCATGTATGGAAAAGAAGATCCATGGGTTACACCATTTTGGGGAGTTCAGGT TAAAAATAAGGTGCCCGAAGCTCCATATTATCAGATCAGCCCTGCTGGTCATTGCCCACATGATGAAGTTCCTGAGGTCATAAATTTCTTACTTCGTGGG TGGATCAGAAACATAGAGTCTCAGGGTTCTTTGTCCTTACCTTTGCTTGAAGAGTTAGACAGTATGAAACAAAATATTGACAGAGAGTTAGAATTTCCCA GAGAAGGTTCAAAAAAATCAGTGATGGTCAAATTTTTAGGTTCCAGTATCTCACTTTGGGACAGGATAAGATCTTACATTAAATCTGATTCCAAGTTCAG GAATTTGGCAGCCAAATCTCAATGATATGTCACACTATGCCCTCTTCAATGCCTCAAGTATATACCAACTTTGTATATTCTCTTCTCTTATTTATAGTTT ATAAAAATGTTTTAAGTTGCGATTACGATCGCGATTGCAATCATGGTTGTGGTTATTACGATTGTAGTCATTGCGACTATACAAGTTGTTTTAGAATCAG TCCTCAATGACTTTGCTTAATATCTATTCCCTTTTCTTTTAATTAAGAGTCTAACTTGAAGATTTGAACTATAATCTACCTATCACAAGAAAAGCTTTAT TGTTGTTCTGATATGTGTCATTTTTCTTCCCAACCAATCCTTTGTTAGTAACCTTTACTTGGCAAAGGGAAGGAAAGAAAGAAAGCAGGACATGTTTAAT TCTGGATAATCCAAATTCTTAAAATATGTGCACTGATAGTGTAAAGTTTTTTACATTGTC
• Tissue: pods
• Gene name: LI_gene_143894;
• Additional information: details;

Expression of Ll_transcript_366539

FPKM

• PAB: 150.1
• PNAB: 11.3
• PS1: 21
• PS2: 12.1
• PS3: 14.7
• PW1: 13.2
• PW2: 24.7
• PW3: 34

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_366539

• Blastp: Pheophytinase, chloroplastic from Arabidopsis with 64.73% of identity
• Blastx: Pheophytinase, chloroplastic from Arabidopsis with 63.84% of identity
• Eggnog: Alpha beta hydrolase(COG0596)
• Kegg: Link to kegg annotations (AT5G13800)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019425829.1)
• Pfam: alpha/beta hydrolase fold (PF00561.19)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;