Id Trinity | TRINITY_DN46348_c7_g1_i2 |
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Name Transcript | Ll_transcript_366218 |
Sequence | TCTCTATGATTGCTCATATAAAATTTGTCTTTGAACGAATTCGGATTTTCAAACACATAACTTTCTCTCTCTCACCAAAGCTATGAGATTCAATTTCAAT ACCAGAGATTGATTTTCTTAGTATCTTCATATTCTCAAAGAATCTTCTTCATAGAAAGGCTTTTAAGGTGGTTTTGATTCAAATTCACCCGTGTTCTTTA CTCTTCCGTGTGGATTGTGATTTGTTGGTGCCAGAATCTTTAATATTGAAACATAACACACAATGGTCGCAAAAGTCCGGCAAAATGCTACTGACTCTCC TATTCCAAAACCAGAGGTTGGAGAGATTGACACCAGTCCACCTTTTCAGTCCGTTAAAGATGCTGTCTCTTTATTTGGTGAAGGTGCTTTCTCTGGTGAA AAACCTGCCTTTAAGAAGTCAAAACCTTATTCTGCGGAGGTAATTATCATTGTTGTGTTTGTTTTATGTTTAAAACTACAAATCCCTTGTGGCATTGCAA AATCATATCTGAAAATTGTATTTAATGAAAGTGTATCCTGTAAATTGAATGGAGTAATTGTAGCATAAACCTAGTGTGATTTTCAAGGTAGGCTAACTTT ACCTAACGTTAAACTTTATGAAGTATTAATAGTATACTTTTTATAACATAGTTACTCAGTTTACTAAATAAGGTTTTACTTTGTTATATTGTCTTGAGTT TCTTCACAATGTCATACTTGTGAAATCATGAATATAATAAATTATAAGAAGTGTTCCTATTTTTTTCTCATTGGTTTAGGTATGCTTTATGTGCAAACAA CCTTGTGCTTATTTTTATAAATTTGGTCCACAGTTCTATTTAACAATACACCTGTTTTTTGTCTCTGTTGTCAATAGCACACTTACTAGGCATGACTGCA AAACACGATGCATCACAGAGCGCTTGTCAGTTGTTGTCAATCACGGCTGTTATAGGGTCATCCCAGTTCCTGCCTTCATGTGGCTGCTAGAGTTAGGGTT TTTTCAACATTTCTGATACCCTCATTTCTTTCTCAATATTTTCTGCACTTTAACTAACGAAAATTCTAGTTTGCCTTGTTTAACCCTGCAAATCTCTATT TTTTCTCGTTCTTTATCTTATCAAATGTCTTGTTTACCCTCTTTTAAACTCAGTAGATGAGTATATCACAGTTTTACCCTTCTCAGATTGGCTCCTCCAC CCACTGAAGTCCCACCTTCTTCTCCCTCGCATAAACCTGTAGCATACTGACTCGCCTTCTTCTTCCTTCAGTTTTATTTTAGCAGCAACTACCCCATTTC AACAAGTTCCTAGCAGGCTAAACCTGTTTCGCACTCTCTGCACTGTTTTGGAAAGTTCACAGCATCGTACCCTTGTTTCCTACTCTCTGCACTGTTTTTT TATTACTAACTTATTGCTATTATGGTTATTAGTTATGCTTCGCATTAATGGTAATTGTATCTGTAAATTAAGATTTTGAGTTTAATGATTAGCATATGTG TGAATAATTGTTTAGTATAGTGGCCATCCCGCTATCCGCTATACTATAATTTTTTCGGGTTGGCCTCTCCACACTGTTATCTGGATTGATTATTATGCTT TGTGTTATATATCTTCTGATTATTACGAGTCTTCCTATATCAATCTCAACATGTTTTAGTTTCTATTTAAACATTGATGATTGAGTTTAAATGTCTAGAA GTTGTAAATGGTATAGATGATAAATCTGCTTTCTTAAATGGTCTCTACCCTGACCAAAATCCCTTTGCAGATTTATAGCTCATCAAAATTAGAAAAATTT ATGAAGTGTATCAACAATGTTCTTGGTTGAAAATGATGTTAAAACTACATTGGTAGGCTTTTGCTTTTGATTAGTGTCTTTTGGCACTGTTAATTGTATT GCCATCTTACTATAATTCGGAAATCATTAATTTTTGAGTATGTTACTCCATAAATTGTACACTATGCTAATAAAGTGAG BLAST |
Tissue | pods |
Gene name | LI_gene_143935; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_366218
Blastp | WEB family protein At5g55860 from Arabidopsis with 64.06% of identity |
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Blastx | WEB family protein At5g55860 from Arabidopsis with 60.56% of identity |
Eggnog | protein PLASTID MOVEMENT IMPAIRED(ENOG410Y9HM) |
Kegg | Link to kegg annotations (AT5G55860) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019425664.1) |
Pfam | - |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |